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2NWN
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BU of 2nwn by Molmil
New Pharmacophore for Serine Protease Inhibition Revealed by Crystal Structure of Human Urokinase-type Plasminogen Activator Complexed with a Cyclic Peptidyl Inhibitor, upain-1
Descriptor: Plasminogen activator, urokinase, upain-1
Authors:Zhao, G, Yuan, C, Wind, T, Andreasen, P.A, Huang, Z, Huang, M, Structural Genomics Consortium (SGC)
Deposit date:2006-11-16
Release date:2007-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis of specificity of a peptidyl urokinase inhibitor, upain-1
J.Struct.Biol., 160, 2007
2O8U
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BU of 2o8u by Molmil
Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q/S195A) in complex with Inhibitors
Descriptor: BENZAMIDINE, DI(HYDROXYETHYL)ETHER, SULFATE ION, ...
Authors:Zhao, G, Yuan, C, Jiang, L, Huang, Z, Huang, M.
Deposit date:2006-12-12
Release date:2007-12-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q/S195A) in complex with Inhibitors
To be Published
2O8T
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BU of 2o8t by Molmil
Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q) in complex with Inhibitors
Descriptor: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, SULFATE ION, ...
Authors:Zhao, G, Yuan, C, Jiang, L, Huang, Z, Huang, M.
Deposit date:2006-12-12
Release date:2007-12-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q/S195A) in complex with Inhibitors
To be Published
2O8W
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BU of 2o8w by Molmil
Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q/S195A) in complex with Inhibitors
Descriptor: 1-phenylguanidine, SULFATE ION, TETRAETHYLENE GLYCOL, ...
Authors:Zhao, G, Yuan, C, Jiang, L, Huang, Z, Huang, M.
Deposit date:2006-12-12
Release date:2007-12-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q/S195A) in complex with Inhibitors
To be Published
3FA1
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BU of 3fa1 by Molmil
Crystal Structure of Tellurium Derivatized DNA
Descriptor: 5'-D(*DGP*(UMS)P*DGP*(TTI)P*DAP*DCP*DAP*DC)-3'
Authors:Sheng, J, Tatsuya, M, Hassan, A.E, Huang, Z.
Deposit date:2008-11-14
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Tellurium Derivatized DNA
To be Published
3WVJ
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BU of 3wvj by Molmil
The crystal structure of native glycosidic hydrolase
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucanase
Authors:Chen, C.C, Huang, J.W, Zhao, P, Ko, T.P, Huang, C.H, Chan, H.C, Huang, Z, Liu, W, Cheng, Y.S, Liu, J.R, Guo, R.T.
Deposit date:2014-05-22
Release date:2015-06-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural analyses and yeast production of the beta-1,3-1,4-glucanase catalytic module encoded by the licB gene of Clostridium thermocellum.
Enzyme.Microb.Technol., 71, 2015
8J7S
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BU of 8j7s by Molmil
Structure of the SPARTA complex
Descriptor: DNA (5'-D(P*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*CP*AP*AP*TP*AP*GP*A)-3'), Piwi domain-containing protein, RNA (5'-R(P*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*A)-3'), ...
Authors:Guo, M, Zhu, Y, Lin, Z, Huang, Z.
Deposit date:2023-04-28
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Cryo-EM structure of the ssDNA-activated SPARTA complex.
Cell Res., 33, 2023
6VQV
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BU of 6vqv by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF9
Descriptor: AcrF9, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
Authors:Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
Deposit date:2020-02-06
Release date:2020-03-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VQX
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BU of 6vqx by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF6
Descriptor: AcrF6, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
Authors:Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
Deposit date:2020-02-06
Release date:2020-03-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VQW
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BU of 6vqw by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF8
Descriptor: AcrF8, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
Authors:Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
Deposit date:2020-02-06
Release date:2020-03-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
2I30
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BU of 2i30 by Molmil
Human serum albumin complexed with myristate and salicylic acid
Descriptor: 2-HYDROXYBENZOIC ACID, MYRISTIC ACID, Serum albumin
Authors:Yang, F, Bian, C, Zhu, L, Zhao, G, Huang, Z, Huang, M.
Deposit date:2006-08-17
Release date:2006-12-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Effect of human serum albumin on drug metabolism: Structural evidence of esterase activity of human serum albumin
J.Struct.Biol., 157, 2007
2I2Z
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BU of 2i2z by Molmil
Human serum albumin complexed with myristate and aspirin
Descriptor: 2-HYDROXYBENZOIC ACID, MYRISTIC ACID, Serum albumin
Authors:Yang, F, Bian, C, Zhu, L, Zhao, G, Huang, Z, Huang, M.
Deposit date:2006-08-17
Release date:2006-12-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Effect of human serum albumin on drug metabolism: Structural evidence of esterase activity of human serum albumin
J.Struct.Biol., 157, 2007
5TGP
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BU of 5tgp by Molmil
DNA 8mer containing two 2SeT modifications
Descriptor: DNA/RNA (5'-R(*G)-D(P*(2ST))-R(P*G)-D(P*(2ST))-R(P*AP*CP*AP*C)-3')
Authors:Zhang, W, Huang, Z.
Deposit date:2016-09-28
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:DNA 8mer containing two 2SeT modifications
To Be Published
3HGA
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BU of 3hga by Molmil
Crystal Structure of 4-Se-Uridine Derivatized RNA
Descriptor: 5'-R(*UP*(US5)P*CP*GP*CP*G)-3'
Authors:Sheng, J, Soares, A, Huang, Z.
Deposit date:2009-05-13
Release date:2009-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Oxygen Replacement with Selenium at the Uridine 4-Position for RNA Structure Study and Visualization
To be Published
3HGD
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BU of 3hgd by Molmil
Crystal Structure of 2-Se-Thymidine Derivatized DNA
Descriptor: 5'-D(*GP*(UMS)P*GP*(US3)P*AP*CP*AP*C)-3'
Authors:Sheng, J, Hassan, A.E, Zhang, W, Huang, Z.
Deposit date:2009-05-13
Release date:2009-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:High fidelity of base pairing by 2-selenothymidine in DNA.
J.Am.Chem.Soc., 132, 2010
5TSL
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BU of 5tsl by Molmil
Molecular Dynamics Flexible Fitting Model of Coxsackievirus A16 empty Procapsid VP3 Subunit
Descriptor: coxsackievirus A16
Authors:Fan, C, Cong, Y, Ye, X, Huang, Z.
Deposit date:2016-10-29
Release date:2017-02-01
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Structural alteration and surface modifi cation of coxsackievirus A16 capsids by beta-propiolactone treatment
J.VIROL., 2017
5TSK
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BU of 5tsk by Molmil
Molecular Dynamics Flexible Fitting Model of Coxsackievirus A16 empty Procapsid VP1 Subunit
Descriptor: coxsackievirus A16 empty procapsid VP1 subunit
Authors:Fan, C, Cong, Y, Ye, X, Huang, Z.
Deposit date:2016-10-29
Release date:2017-02-01
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Structural alteration and surface modifi cation of coxsackievirus A16 capsids by beta-propiolactone treatment
J.VIROL., 2017
3IFF
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BU of 3iff by Molmil
2'-SeMe-A modified DNA decamer
Descriptor: DNA (5'-D(*GP*TP*AP*CP*GP*CP*GP*TP*(XUA)P*C)-3'), MAGNESIUM ION
Authors:Sheng, J, Gan, J, Salon, J, Huang, Z.
Deposit date:2009-07-24
Release date:2009-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Selenium modification at 2'-position of adenosine for nucleic acid structure studies
To be Published
3IFI
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BU of 3ifi by Molmil
2'-SeMe-dG modified octamer DNA
Descriptor: DNA (5'-D(*GP*TP*(XUG)P*TP*AP*CP*AP*C)-3')
Authors:Sheng, J, Gan, J, Salon, J, Huang, Z.
Deposit date:2009-07-24
Release date:2009-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Synthesis and crystal structure of 2'-se-modified guanosine containing DNA.
J.Org.Chem., 75, 2010
3IKI
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BU of 3iki by Molmil
5-SMe-dU containing DNA octamer
Descriptor: 5'-D(*GP*(UMS)P*GP*(US2)P*AP*CP*AP*C)-3', MAGNESIUM ION
Authors:Sheng, J, Hassan, A.E.A, Zhang, W, Gan, J, Huang, Z.
Deposit date:2009-08-05
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Hydrogen bond formation between the naturally modified nucleobase and phosphate backbone.
Nucleic Acids Res., 40, 2012
3IJN
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BU of 3ijn by Molmil
5-SeMe-Cytidine modified DNA 8mer
Descriptor: 5'-D(*GP*(UMS)P*GP*TP*AP*(5SE)P*AP*C)-3'
Authors:Sheng, J, Zhang, W, Hassan, A.E.A, Gan, J, Huang, Z.
Deposit date:2009-08-04
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:5-SeMe-Cytidine modified DNA 8mer
TO BE PUBLISHED
3J04
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BU of 3j04 by Molmil
EM structure of the heavy meromyosin subfragment of Chick smooth muscle Myosin with regulatory light chain in phosphorylated state
Descriptor: Myosin light polypeptide 6, Myosin regulatory light chain 2, smooth muscle major isoform, ...
Authors:Baumann, B.A.J, Taylor, D, Huang, Z, Tama, F, Fagnant, P.M, Trybus, K, Taylor, K.
Deposit date:2011-02-18
Release date:2011-11-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (20 Å)
Cite:Phosphorylated smooth muscle heavy meromyosin shows an open conformation linked to activation.
J.Mol.Biol., 415, 2012
3JAU
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BU of 3jau by Molmil
The cryoEM map of EV71 mature viron in complex with the Fab fragment of antibody D5
Descriptor: Capsid protein VP1, Heavy chain of Fab fragment variable region of antibody D5, Light chain of Fab fragment variable region of antibody D5
Authors:Fan, C, Ye, X.H, Ku, Z.Q, Zuo, T, Kong, L.L, Zhang, C, Shi, J.P, Liu, Q.W, Chen, T, Zhang, Y.Y, Jiang, W, Zhang, L.Q, Huang, Z, Cong, Y.
Deposit date:2015-06-24
Release date:2016-02-10
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structural Basis for Recognition of Human Enterovirus 71 by a Bivalent Broadly Neutralizing Monoclonal Antibody
Plos Pathog., 12, 2016
3K18
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BU of 3k18 by Molmil
Tellurium modified DNA-8mer
Descriptor: 5'-D(*GP*(UMS)P*GP*(TTI)P*AP*CP*AP*C)-3'
Authors:Sheng, J, Hassan, A.E.A, Zhang, W, Huang, Z.
Deposit date:2009-09-25
Release date:2010-10-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Synthesis and Structure Study of Oligonucleotides Derivatized with Tellurium Functionality
To be Published
5WTI
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BU of 5wti by Molmil
Crystal structure of the CRISPR-associated protein in complex with crRNA and DNA
Descriptor: CRISPR-associated protein, DNA (28-MER), DNA (5'-D(P*GP*TP*GP*TP*GP*GP*AP*TP*TP*CP*CP*G)-3'), ...
Authors:Wu, D, Guan, X, Zhu, Y, Huang, Z.
Deposit date:2016-12-13
Release date:2017-11-01
Method:X-RAY DIFFRACTION (2.682 Å)
Cite:Structural basis of stringent PAM recognition by CRISPR-C2c1 in complex with sgRNA
Cell Res., 27, 2017

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