Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6WN4
DownloadVisualize
BU of 6wn4 by Molmil
Structural basis for the binding of monoclonal antibody 5D2 to the tryptophan-rich lipid-binding loop in lipoprotein lipase
分子名称: 5D2 FAB HEAVY CHAIN, 5D2 FAB LIGHT CHAIN, Lipoprotein lipase peptide
著者Luz, J.G, Birrane, G, Young, S.G, Meiyappan, M, Ploug, M.
登録日2020-04-22
公開日2020-07-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The structural basis for monoclonal antibody 5D2 binding to the tryptophan-rich loop of lipoprotein lipase.
J.Lipid Res., 61, 2020
6GQF
DownloadVisualize
BU of 6gqf by Molmil
The structure of mouse AsterA (GramD1a) with 25-hydroxy cholesterol
分子名称: 25-HYDROXYCHOLESTEROL, GLYCEROL, GRAM domain-containing protein 1A
著者Fairall, L, Gurnett, J.E, Vashi, D, Sandhu, J, Tontonoz, P, Schwabe, J.W.R.
登録日2018-06-07
公開日2018-09-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Aster Proteins Facilitate Nonvesicular Plasma Membrane to ER Cholesterol Transport in Mammalian Cells.
Cell, 175, 2018
6WQ1
DownloadVisualize
BU of 6wq1 by Molmil
Eukaryotic LanCL2 protein
分子名称: LanC-like protein 2, ZINC ION
著者Nair, S.K, Garg, N.
登録日2020-04-28
公開日2021-05-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.295 Å)
主引用文献LanCLs add glutathione to dehydroamino acids generated at phosphorylated sites in the proteome.
Cell, 184, 2021
3VOD
DownloadVisualize
BU of 3vod by Molmil
Crystal Structure of mutant MarR C80S from E.coli
分子名称: Multiple antibiotic resistance protein marR
著者Lou, H, Zhu, R, Hao, Z.
登録日2012-01-21
公開日2013-03-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The multiple antibiotic resistance regulator MarR is a copper sensor in Escherichia coli.
Nat.Chem.Biol., 10, 2014
3QPT
DownloadVisualize
BU of 3qpt by Molmil
Crystal structure of the Salmonella transcriptional regulator SlyA
分子名称: Transcriptional regulator slyA
著者Dolan, K.T, Duguid, E.M.
登録日2011-02-14
公開日2011-05-04
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures of SlyA Protein, a Master Virulence Regulator of Salmonella, in Free and DNA-bound States.
J.Biol.Chem., 286, 2011
3Q5F
DownloadVisualize
BU of 3q5f by Molmil
Crystal structure of the Salmonella transcriptional regulator SlyA in complex with DNA
分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*CP*TP*TP*AP*GP*CP*AP*AP*GP*CP*TP*AP*AP*TP*TP*AP*TP*A)-3'), DNA (5'-D(*TP*TP*AP*TP*AP*AP*TP*TP*AP*GP*CP*TP*TP*GP*CP*TP*AP*AP*GP*TP*TP*AP*T)-3'), Transcriptional regulator slyA
著者Dolan, K.T, Duguid, E.M.
登録日2010-12-28
公開日2011-05-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Crystal Structures of SlyA Protein, a Master Virulence Regulator of Salmonella, in Free and DNA-bound States.
J.Biol.Chem., 286, 2011
6K4L
DownloadVisualize
BU of 6k4l by Molmil
Crystal structure of Se-labelled SidJ complex with CaM at 2.95 A
分子名称: CALCIUM ION, CHLORIDE ION, Calmodulin-1, ...
著者Ouyang, S.Y.
登録日2019-05-24
公開日2019-07-24
最終更新日2019-08-28
実験手法X-RAY DIFFRACTION (2.949 Å)
主引用文献Regulation of phosphoribosyl ubiquitination by a calmodulin-dependent glutamylase.
Nature, 572, 2019
8DFL
DownloadVisualize
BU of 8dfl by Molmil
Structure of human Kv1.3 with A0194009G09 nanobodies (alternate conformation)
分子名称: Nanobody A0194009G09, POTASSIUM ION, Potassium voltage-gated channel subfamily A member 3,Green fluorescent protein fusion
著者Meyerson, J.R, Selvakumar, P.
登録日2022-06-22
公開日2022-07-13
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Structures of the T cell potassium channel Kv1.3 with immunoglobulin modulators.
Nat Commun, 13, 2022
5ZAT
DownloadVisualize
BU of 5zat by Molmil
Crystal structure of 5-carboxylcytosine containing decamer dsDNA
分子名称: DNA (5'-D(*CP*CP*AP*GP*(CAC)P*GP*CP*TP*GP*G)-3')
著者Fu, T.R, Zhang, L.
登録日2018-02-08
公開日2019-02-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Thymine DNA glycosylase recognizes the geometry alteration of minor grooves induced by 5-formylcytosine and 5-carboxylcytosine.
Chem Sci, 10, 2019
5ZAS
DownloadVisualize
BU of 5zas by Molmil
Crystal structure of 5-formylcytosine containing decamer dsDNA
分子名称: BICARBONATE ION, DNA (5'-D(*CP*CP*AP*GP*(5FC)P*GP*CP*TP*GP*G)-3')
著者Fu, T.R, Zhang, L.
登録日2018-02-08
公開日2019-02-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Thymine DNA glycosylase recognizes the geometry alteration of minor grooves induced by 5-formylcytosine and 5-carboxylcytosine.
Chem Sci, 10, 2019
7LVT
DownloadVisualize
BU of 7lvt by Molmil
Structure of full-length GluK1 with L-Glu
分子名称: Isoform Glur5-2 of Glutamate receptor ionotropic, kainate 1
著者Meyerson, J.R, Selvakumar, P.
登録日2021-02-26
公開日2021-11-03
最終更新日2021-11-10
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural and compositional diversity in the kainate receptor family.
Cell Rep, 37, 2021
1TMF
DownloadVisualize
BU of 1tmf by Molmil
THREE-DIMENSIONAL STRUCTURE OF THEILER MURINE ENCEPHALOMYELITIS VIRUS (BEAN STRAIN)
分子名称: THEILER'S MURINE ENCEPHALOMYELITIS VIRUS (SUBUNIT VP1), THEILER'S MURINE ENCEPHALOMYELITIS VIRUS (SUBUNIT VP2), THEILER'S MURINE ENCEPHALOMYELITIS VIRUS (SUBUNIT VP3), ...
著者Luo, M, Toth, K.S.
登録日1992-02-20
公開日1993-10-31
最終更新日2023-04-19
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Three-dimensional structure of Theiler murine encephalomyelitis virus (BeAn strain).
Proc.Natl.Acad.Sci.USA, 89, 1992
7SSY
DownloadVisualize
BU of 7ssy by Molmil
Structure of human Kv1.3 (alternate conformation)
分子名称: POTASSIUM ION, Potassium voltage-gated channel subfamily A member 3,Green fluorescent protein fusion
著者Meyerson, J.R, Selvakumar, P.
登録日2021-11-11
公開日2022-06-29
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Structures of the T cell potassium channel Kv1.3 with immunoglobulin modulators.
Nat Commun, 13, 2022
7SSV
DownloadVisualize
BU of 7ssv by Molmil
Structure of human Kv1.3 with Fab-ShK fusion
分子名称: Fab-ShK fusion, heavy chain, light chain, ...
著者Meyerson, J.R, Selvakumar, P, Smider, V, Huang, R.
登録日2021-11-11
公開日2022-06-29
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Structures of the T cell potassium channel Kv1.3 with immunoglobulin modulators.
Nat Commun, 13, 2022
7SSZ
DownloadVisualize
BU of 7ssz by Molmil
Structure of human Kv1.3 with A0194009G09 nanobodies
分子名称: Nanobody A0194009G09, POTASSIUM ION, Potassium voltage-gated channel subfamily A member 3,Green fluorescent protein fusion
著者Meyerson, J.R, Selvakumar, P.
登録日2021-11-11
公開日2022-06-29
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Structures of the T cell potassium channel Kv1.3 with immunoglobulin modulators.
Nat Commun, 13, 2022
7SSX
DownloadVisualize
BU of 7ssx by Molmil
Structure of human Kv1.3
分子名称: POTASSIUM ION, Potassium voltage-gated channel subfamily A member 3, Green fluorescent protein fusion
著者Meyerson, J.R, Selvakumar, P.
登録日2021-11-11
公開日2022-06-29
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Structures of the T cell potassium channel Kv1.3 with immunoglobulin modulators.
Nat Commun, 13, 2022
6UBF
DownloadVisualize
BU of 6ubf by Molmil
Role of Beta-hairpin motifs in the DNA duplex opening by the Rad4/XPC nucleotide excision repair complex
分子名称: DNA (5'-D(*AP*TP*TP*GP*TP*AP*GP*CP*GP*GP*GP*AP*TP*GP*TP*CP*GP*AP*GP*TP*CP*A)-3'), DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*(G47)P*AP*CP*AP*TP*CP*CP*C*GP*CP*TP*AP*CP*AP*A)-3'), DNA repair protein RAD4, ...
著者Paul, D, Min, J.H.
登録日2019-09-11
公開日2020-10-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.597 Å)
主引用文献Kinetic gating mechanism of DNA damage recognition by Rad4/XPC.
Nat Commun, 6, 2015
6URA
DownloadVisualize
BU of 6ura by Molmil
Crystal structure of RUBISCO from Promineofilum breve
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain
著者Pereira, J.H, Banda, D.M, Liu, A.K, Shih, P.M, Adams, P.D.
登録日2019-10-23
公開日2020-08-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Novel bacterial clade reveals origin of form I Rubisco.
Nat.Plants, 6, 2020
5W4U
DownloadVisualize
BU of 5w4u by Molmil
Pol II elongation complex with an N6-methyladenine-containing template
分子名称: 14mer non-template DNA, 29mer template DNA, 9mer RNA, ...
著者Wang, W, Wang, D.
登録日2017-06-13
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Epigenetic DNA Modification N6-Methyladenine Causes Site-Specific RNA Polymerase II Transcriptional Pausing.
J.Am.Chem.Soc., 139, 2017
5W51
DownloadVisualize
BU of 5w51 by Molmil
Pol II elongation complex with an N6-methyladenine-containing template and a matched UMPNPP
分子名称: 14mer non-template DNA, 29mer template DNA, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, ...
著者Wang, W, Wang, D.
登録日2017-06-13
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.404 Å)
主引用文献Epigenetic DNA Modification N6-Methyladenine Causes Site-Specific RNA Polymerase II Transcriptional Pausing.
J.Am.Chem.Soc., 139, 2017
3SIK
DownloadVisualize
BU of 3sik by Molmil
Crystal structure of the Bacillus anthracis hemophore IsdX1 complexed with heme
分子名称: Conserved domain protein, PROTOPORPHYRIN IX CONTAINING FE
著者Owens, C.P, Goulding, C.W.
登録日2011-06-19
公開日2012-05-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.149 Å)
主引用文献Differential function of lip residues in the mechanism and biology of an anthrax hemophore.
Plos Pathog., 8, 2012
4ZOQ
DownloadVisualize
BU of 4zoq by Molmil
Crystal Structure of a Lanthipeptide Protease
分子名称: Intracellular serine protease
著者Dong, S.H, Nair, S.K.
登録日2015-05-06
公開日2016-03-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Applications of the class II lanthipeptide protease LicP for sequence-specific, traceless peptide bond cleavage.
Chem Sci, 6, 2015
7E3L
DownloadVisualize
BU of 7e3l by Molmil
Ultrapotent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 58G6 heavy chain, 58G6 light chain, ...
著者Guo, H, Li, T, Liu, F, Gao, Y, Ji, X, Yang, H.
登録日2021-02-09
公開日2021-09-15
最終更新日2022-03-02
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Potent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants.
Nat Commun, 12, 2021
7E3K
DownloadVisualize
BU of 7e3k by Molmil
Ultrapotent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants
分子名称: 13G9 heavy chain, 13G9 light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Guo, H, Li, T, Liu, F, Gao, Y, Ji, X, Yang, H.
登録日2021-02-09
公開日2021-09-15
最終更新日2022-03-02
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Potent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants.
Nat Commun, 12, 2021
8JNR
DownloadVisualize
BU of 8jnr by Molmil
Crystal structure of human ALKBH3 bound to 3mC containing ssDNA through distal crosslink
分子名称: Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3, DNA, MANGANESE (II) ION, ...
著者Zhang, L.
登録日2023-06-06
公開日2024-01-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.66 Å)
主引用文献The Molecular Basis of Human ALKBH3 Mediated RNA N 1 -methyladenosine (m 1 A) Demethylation.
Angew.Chem.Int.Ed.Engl., 63, 2024

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon