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7N61
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structure of C2 projections and MIPs
分子名称: ADENOSINE-5'-DIPHOSPHATE, FAP147, FAP178, ...
著者Han, L, Zhang, K.
登録日2021-06-07
公開日2022-05-18
最終更新日2022-06-01
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure of an active central apparatus.
Nat.Struct.Mol.Biol., 29, 2022
7N6G
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C1 of central pair
分子名称: CPC1, Calmodulin, DPY30, ...
著者Han, L, Zhang, K.
登録日2021-06-08
公開日2022-05-18
最終更新日2022-06-01
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structure of an active central apparatus.
Nat.Struct.Mol.Biol., 29, 2022
5HOQ
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Apo structure of CalS11, TDP-rhamnose 3'-o-methyltransferase, an enzyme in Calicheamicin biosynthesis
分子名称: SULFATE ION, TDP-rhamnose 3'-O-methyltransferase (CalS11)
著者Han, L, Helmich, K.E, Singh, S, Thorson, J.S, Bingman, C.A, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis
登録日2016-01-19
公開日2016-03-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.793 Å)
主引用文献Loop dynamics of thymidine diphosphate-rhamnose 3'-O-methyltransferase (CalS11), an enzyme in calicheamicin biosynthesis.
Struct Dyn., 3, 2016
5BK7
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BU of 5bk7 by Molmil
The structure of MppP E15A mutant soaked with the substrate L-arginine
分子名称: (E)-N~2~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-arginine, PLP-Dependent L-Arginine Hydroxylase MppP
著者Han, L, Silvaggi, N.R.
登録日2018-01-27
公開日2018-09-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.196 Å)
主引用文献Streptomyces wadayamensis MppP is a PLP-Dependent Oxidase, Not an Oxygenase.
Biochemistry, 57, 2018
5XPD
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Sugar transporter of AtSWEET13 in inward-facing state with a substrate analog
分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, sugar transporter
著者Han, L, Zhang, X.J.
登録日2017-06-01
公開日2017-09-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.788 Å)
主引用文献Molecular mechanism of substrate recognition and transport by the AtSWEET13 sugar transporter
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6C8T
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The structure of MppP soaked with the substrate L-Arg
分子名称: (E)-N~2~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-arginine, CHLORIDE ION, PLP-Dependent L-Arginine Hydroxylase MppP
著者Han, L, Silvaggi, N.R.
登録日2018-01-25
公開日2018-09-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Streptomyces wadayamensis MppP is a PLP-Dependent Oxidase, Not an Oxygenase.
Biochemistry, 57, 2018
6C92
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The structure of MppP soaked with the product 2-ketoarginine
分子名称: (4S)-5-carbamimidamido-4-hydroxy-2-oxopentanoic acid, (E)-N~2~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-arginine, PLP-Dependent L-Arginine Hydroxylase MppP
著者Han, L, Silvaggi, N.R.
登録日2018-01-25
公開日2018-09-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.834 Å)
主引用文献Streptomyces wadayamensis MppP is a PLP-Dependent Oxidase, Not an Oxygenase.
Biochemistry, 57, 2018
6C9B
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The structure of MppP soaked with the products 4HKA and 2KA
分子名称: (4S)-5-carbamimidamido-4-hydroxy-2-oxopentanoic acid, CHLORIDE ION, PLP-Dependent L-Arginine Hydroxylase MppP
著者Han, L, Silvaggi, N.R.
登録日2018-01-26
公開日2018-04-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.689 Å)
主引用文献Streptomyces wadayamensis MppP is a PLP-Dependent Oxidase, Not an Oxygenase.
Biochemistry, 57, 2018
7YSE
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Crystal structure of E. coli heterotetrameric GlyRS in complex with tRNA
分子名称: Glycine--tRNA ligase alpha subunit, Glycine--tRNA ligase beta subunit, MAGNESIUM ION, ...
著者Han, L, Ju, Y, Zhou, H.
登録日2022-08-12
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.907 Å)
主引用文献The binding mode of orphan glycyl-tRNA synthetase with tRNA supports the synthetase classification and reveals large domain movements.
Sci Adv, 9, 2023
7SLA
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BU of 7sla by Molmil
CryoEM structure of SGLT1 at 3.15 Angstrom resolution
分子名称: CHOLESTEROL HEMISUCCINATE, Sodium/glucose cotransporter 1, nanobody Nb1
著者Qu, Q, Han, L, Panova, O, Feng, L, Skiniotis, G.
登録日2021-10-23
公開日2021-12-15
最終更新日2022-01-26
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structure and mechanism of the SGLT family of glucose transporters.
Nature, 601, 2022
7SL8
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CryoEM structure of SGLT1 at 3.4 A resolution
分子名称: CHOLESTEROL, Sodium/glucose cotransporter 1, nanobody Nb1
著者Qu, Q, Han, L, Panova, O, Feng, L, Skiniotis, G.
登録日2021-10-23
公開日2021-12-15
最終更新日2022-01-26
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure and mechanism of the SGLT family of glucose transporters.
Nature, 601, 2022
7SL9
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CryoEM structure of SMCT1
分子名称: Sodium-coupled monocarboxylate transporter 1, butanoic acid, nanobody Nb2
著者Qu, Q, Han, L, Panova, O, Feng, L, Skiniotis, G.
登録日2021-10-23
公開日2021-12-15
最終更新日2022-01-26
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure and mechanism of the SGLT family of glucose transporters.
Nature, 601, 2022
7N7V
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BU of 7n7v by Molmil
Crystal structure of TtnM, a Fe(II)-alpha-ketoglutarate-dependent hydroxylase from the tautomycetin biosynthesis pathway in Streptomyces griseochromogenes at 2 A.
分子名称: CHLORIDE ION, FE (II) ION, Predicted hydroxylase
著者Han, L, Xu, W, Ma, M, Miller, M.D, Shen, B, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2021-06-11
公開日2022-07-06
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structure of TtnM, a Fe(II)-alpha-ketoglutarate-dependent hydroxylase from the tautomycetin biosynthesis pathway in Streptomyces griseochromogenes.
To Be Published
5EJN
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BU of 5ejn by Molmil
Crystal structure of Juno, the mammalian egg receptor for sperm Izumo1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Sperm-egg fusion protein Juno
著者Nishimura, K, Han, L, Jovine, L.
登録日2015-11-02
公開日2016-02-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Divergent evolution of vitamin B9 binding underlies Juno-mediated adhesion of mammalian gametes.
Curr.Biol., 26, 2016
6DA6
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BU of 6da6 by Molmil
Crystal structure of the TtnD decarboxylase from the tautomycetin biosynthesis pathway of Streptomyces griseochromogenes, apo form at 2.6 A resolution (P212121)
分子名称: GLYCEROL, MAGNESIUM ION, UNKNOWN LIGAND, ...
著者Han, L, Rudolf, J.D, Chang, C.-Y, Miller, M.D, Soman, J, Phillips Jr, G.N, Shen, B, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2018-05-01
公開日2018-10-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Biochemical and Structural Characterization of TtnD, a Prenylated FMN-Dependent Decarboxylase from the Tautomycetin Biosynthetic Pathway.
ACS Chem. Biol., 13, 2018
6DA7
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Crystal structure of the TtnD decarboxylase from the tautomycetin biosynthesis pathway of Streptomyces griseochromogenes with apo form at 1.83 A resolution (I222)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, SODIUM ION, ...
著者Han, L, Rudolf, J.D, Chang, C.-Y, Miller, M.D, Soman, J, Phillips Jr, G.N, Shen, B, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2018-05-01
公開日2018-10-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Biochemical and Structural Characterization of TtnD, a Prenylated FMN-Dependent Decarboxylase from the Tautomycetin Biosynthetic Pathway.
ACS Chem. Biol., 13, 2018
6DA9
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Crystal structure of the TtnD decarboxylase from the tautomycetin biosynthesis pathway of Streptomyces griseochromogenes with FMN bound at 2.05 A resolution
分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, MANGANESE (II) ION, ...
著者Han, L, Rudolf, J.D, Chang, C.-Y, Miller, M.D, Soman, J, Xu, W, Phillips Jr, G.N, Shen, B, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2018-05-01
公開日2018-10-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Biochemical and Structural Characterization of TtnD, a Prenylated FMN-Dependent Decarboxylase from the Tautomycetin Biosynthetic Pathway.
ACS Chem. Biol., 13, 2018
5U8M
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BU of 5u8m by Molmil
A novel family of redox sensors in the streptococci evolved from two-component response regulators
分子名称: Response regulator
著者Han, L, Silvaggi, N.R.
登録日2016-12-14
公開日2017-12-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.105 Å)
主引用文献RitR is an archetype for a novel family of redox sensors in the streptococci that has evolved from two-component response regulators and is required for pneumococcal colonization.
PLoS Pathog., 14, 2018
5VFA
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BU of 5vfa by Molmil
RitR Mutant - C128D
分子名称: Response regulator
著者Han, L, Silvaggi, N.R.
登録日2017-04-07
公開日2018-04-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.452 Å)
主引用文献RitR is an archetype for a novel family of redox sensors in the streptococci that has evolved from two-component response regulators and is required for pneumococcal colonization.
PLoS Pathog., 14, 2018
5AYW
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BU of 5ayw by Molmil
Structure of a membrane complex
分子名称: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
著者Huang, Y, Han, L, Zheng, J.
登録日2015-09-14
公開日2016-02-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.555 Å)
主引用文献Structure of the BAM complex and its implications for biogenesis of outer-membrane proteins
Nat.Struct.Mol.Biol., 23, 2016
5DJ3
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BU of 5dj3 by Molmil
Structure of the PLP-Dependent L-Arginine Hydroxylase MppP with D-Arginine Bound
分子名称: (E)-N~2~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-D-arginine, MAGNESIUM ION, PLP-Dependent L-Arginine Hydroxylase MppP
著者Silvaggi, N.R, Han, L.
登録日2015-09-01
公開日2015-11-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.227 Å)
主引用文献Streptomyces wadayamensis MppP Is a Pyridoxal 5'-Phosphate-Dependent l-Arginine alpha-Deaminase, gamma-Hydroxylase in the Enduracididine Biosynthetic Pathway.
Biochemistry, 54, 2015
5DJ1
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Structure of the PLP-Dependent L-Arginine Hydroxylase MppP Holoenzyme
分子名称: CHLORIDE ION, MAGNESIUM ION, PLP-Dependent L-Arginine Hydroxylase MppP
著者Silvaggi, N.R, Han, L.
登録日2015-09-01
公開日2015-11-25
最終更新日2017-05-03
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Streptomyces wadayamensis MppP Is a Pyridoxal 5'-Phosphate-Dependent l-Arginine alpha-Deaminase, gamma-Hydroxylase in the Enduracididine Biosynthetic Pathway.
Biochemistry, 54, 2015
5II6
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BU of 5ii6 by Molmil
Crystal structure of the ZP-N1 domain of mouse sperm receptor ZP2 at 0.95 A resolution
分子名称: Zona pellucida sperm-binding protein 2
著者Dioguardi, E, Han, L, Nishimura, K, De Sanctis, D, Jovine, L.
登録日2016-03-01
公開日2017-06-14
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Structural Basis of Egg Coat-Sperm Recognition at Fertilization.
Cell, 169, 2017
5B5K
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Crystal structure of Izumo1, the mammalian sperm ligand for egg Juno
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Izumo sperm-egg fusion protein 1
著者Nishimura, K, Han, L, De Sanctis, D, Jovine, L.
登録日2016-05-11
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The structure of sperm Izumo1 reveals unexpected similarities with Plasmodium invasion proteins.
Curr.Biol., 26, 2016
8H4Q
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Aspergillomarasmine A biosynthese complex with OPS
分子名称: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, Rhodanese domain-containing protein
著者Lu, M, Zhang, J, Wang, Z, Han, L.
登録日2022-10-11
公開日2023-10-18
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Aspergillomarasmine A biosynthese complex with OPS
To Be Published

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件を2024-04-24に公開中

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