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8CMS
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BU of 8cms by Molmil
OTUB2 in covalent complex with LN5P45
分子名称: (1~{S},2~{S})-~{N}'-ethanoyl-2-(3-methylphenyl)cyclopropane-1-carbohydrazide, Ubiquitin thioesterase OTUB2
著者Gan, J, de Vries, J.
登録日2023-02-21
公開日2023-11-15
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Cellular Validation of a Chemically Improved Inhibitor Identifies Monoubiquitination on OTUB2.
Acs Chem.Biol., 18, 2023
1YYK
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BU of 1yyk by Molmil
Crystal structure of RNase III from Aquifex Aeolicus complexed with double-stranded RNA at 2.5-angstrom resolution
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*G)-3', Ribonuclease III
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-02-25
公開日2005-11-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005
1YYO
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BU of 1yyo by Molmil
Crystal structure of RNase III mutant E110K from Aquifex aeolicus complexed with double-stranded RNA at 2.9-Angstrom Resolution
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*G)-3', Ribonuclease III
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-02-25
公開日2005-11-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005
1YZ9
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BU of 1yz9 by Molmil
Crystal structure of RNase III mutant E110Q from Aquifex aeolicus complexed with double stranded RNA at 2.1-Angstrom Resolution
分子名称: 5'-R(*CP*GP*AP*AP*CP*UP*UP*CP*GP*CP*G)-3', Ribonuclease III, SULFATE ION
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-02-28
公開日2005-11-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005
1YYW
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Crystal structure of RNase III from Aquifex aeolicus complexed with double stranded RNA at 2.8-Angstrom Resolution
分子名称: 5'-R(*AP*AP*AP*UP*AP*UP*AP*UP*AP*UP*UP*U)-3', Ribonuclease III
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-02-25
公開日2005-11-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005
2EZ6
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BU of 2ez6 by Molmil
Crystal structure of Aquifex aeolicus RNase III (D44N) complexed with product of double-stranded RNA processing
分子名称: 28-MER, MAGNESIUM ION, Ribonuclease III
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-11-10
公開日2006-02-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural Insight into the Mechanism of Double-Stranded RNA Processing by Ribonuclease III.
Cell(Cambridge,Mass.), 124, 2006
2G1K
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BU of 2g1k by Molmil
Crystal structure of Mycobacterium tuberculosis shikimate kinase in complex with shikimate at 1.75 angstrom resolution
分子名称: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, CHLORIDE ION, SULFATE ION, ...
著者Gan, J, Gu, Y, Li, Y, Yan, H, Ji, X.
登録日2006-02-14
公開日2006-07-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure of Mycobacterium tuberculosis Shikimate Kinase in Complex with Shikimic Acid and an ATP Analogue.
Biochemistry, 45, 2006
2G1J
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Crystal structure of Mycobacterium tuberculosis Shikimate Kinase at 2.0 angstrom resolution
分子名称: SULFATE ION, Shikimate kinase
著者Gan, J, Gu, Y, Li, Y, Yan, H, Ji, X.
登録日2006-02-14
公開日2006-07-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Mycobacterium tuberculosis Shikimate Kinase in Complex with Shikimic Acid and an ATP Analogue.
Biochemistry, 45, 2006
5JRE
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BU of 5jre by Molmil
Crystal structure of NeC3PO in complex with ssDNA.
分子名称: 9-METHYL-9H-PURIN-6-AMINE, ADENINE, NEQ131, ...
著者Gan, J, Zhang, J.
登録日2016-05-06
公開日2016-09-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for single-stranded RNA recognition and cleavage by C3PO
Nucleic Acids Res., 44, 2016
4M2Z
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BU of 4m2z by Molmil
Crystal structure of RNASE III complexed with double-stranded RNA and CMP (TYPE II CLEAVAGE)
分子名称: CYTIDINE-5'-MONOPHOSPHATE, MAGNESIUM ION, RNA10, ...
著者Gan, J, Liang, Y.-H, Shaw, G.X, Tropea, J.E, Waugh, D.S, Ji, X.
登録日2013-08-05
公開日2013-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献RNase III: Genetics and Function; Structure and Mechanism.
Annu. Rev. Genet., 47, 2013
4M30
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BU of 4m30 by Molmil
Crystal structure of RNASE III complexed with double-stranded RNA AND AMP (TYPE II CLEAVAGE)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
著者Gan, J, Liang, Y.-H, Shaw, G.X, Tropea, J.E, Waugh, D.S, Ji, X.
登録日2013-08-05
公開日2013-12-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献RNase III: Genetics and Function; Structure and Mechanism.
Annu. Rev. Genet., 47, 2013
4QKN
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BU of 4qkn by Molmil
Crystal structure of FTO bound to a selective inhibitor
分子名称: 2-[(2,6-dichloro-3-methyl-phenyl)amino]benzoic acid, Alpha-ketoglutarate-dependent dioxygenase FTO, GLYCEROL, ...
著者Yang, C.-G, Huang, Y, Gan, J.
登録日2014-06-07
公開日2014-12-03
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Meclofenamic acid selectively inhibits FTO demethylation of m6A over ALKBH5.
Nucleic Acids Res., 43, 2015
4R4Z
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BU of 4r4z by Molmil
Structure of PNGF-II in P21 space group
分子名称: PNGF-II
著者Sun, G, Yu, X, Celimuge, Wang, L, Li, M, Gan, J, Qu, D, Ma, J, Chen, L.
登録日2014-08-20
公開日2015-01-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Identification and Characterization of a Novel Prokaryotic Peptide: N-glycosidase from Elizabethkingia meningoseptica
J.Biol.Chem., 2015
4R4X
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BU of 4r4x by Molmil
Structure of PNGF-II in C2 space group
分子名称: PNGF-II, ZINC ION
著者Sun, G, Yu, X, Celimuge, Wang, L, Li, M, Gan, J, Qu, D, Ma, J, Chen, L.
登録日2014-08-20
公開日2015-01-28
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Identification and Characterization of a Novel Prokaryotic Peptide: N-glycosidase from Elizabethkingia meningoseptica
J.Biol.Chem., 2015
3LTR
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BU of 3ltr by Molmil
5-OMe-dU containing DNA 8mer
分子名称: 5'-D(*GP*(UMS)P*GP*(T5O)P*AP*CP*AP*C)-3', MAGNESIUM ION
著者Sheng, J, Hassan, A.E.A, Zhang, W, Gan, J, Huang, Z.
登録日2010-02-16
公開日2010-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Hydrogen bond formation between the naturally modified nucleobase and phosphate backbone.
Nucleic Acids Res., 40, 2012
3DJ9
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BU of 3dj9 by Molmil
Crystal Structure of an isolated, unglycosylated antibody CH2 domain
分子名称: Ig gamma-1 chain C region
著者Prabakaran, P, Vu, B.K, Gan, J, Dimitrov, D.S, Ji, X.
登録日2008-06-22
公開日2008-09-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of an isolated unglycosylated antibody C(H)2 domain.
Acta Crystallogr.,Sect.D, 64, 2008
4MSR
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BU of 4msr by Molmil
RNA 10mer duplex with six 2'-5'-linkages
分子名称: RNA 10mer duplex with six 2'-5'-linkages, STRONTIUM ION
著者Sheng, J, Li, L, Engelhart, A.E, Gan, J, Wang, J, Szostak, J.W.
登録日2013-09-18
公開日2014-02-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural insights into the effects of 2'-5' linkages on the RNA duplex.
Proc.Natl.Acad.Sci.USA, 111, 2014
4MS9
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Native RNA-10mer Structure: ccggcgccgg
分子名称: Native RNA duplex 10mer, STRONTIUM ION
著者Sheng, J, Li, L, Engelhart, A.E, Gan, J, Wang, J, Szostak, J.W.
登録日2013-09-18
公開日2014-02-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Structural insights into the effects of 2'-5' linkages on the RNA duplex.
Proc.Natl.Acad.Sci.USA, 111, 2014
4MSB
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BU of 4msb by Molmil
RNA 10mer duplex with two 2'-5'-linkages
分子名称: RNA 10mer duplex with two 2'-5'-linkages, STRONTIUM ION
著者Sheng, J, Li, L, Engelhart, A.E, Gan, J, Wang, J, Szostak, J.W.
登録日2013-09-18
公開日2014-02-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural insights into the effects of 2'-5' linkages on the RNA duplex.
Proc.Natl.Acad.Sci.USA, 111, 2014
8GKV
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BU of 8gkv by Molmil
Crystal structure of anti-adaptor IraP that regulates RpoS proteolysis
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Shaw, G.X, Gan, J, Suburaman, P, Battesti, A, Zhou, Y.N, Wickner, S, Gottesman, S, Ji, X.
登録日2023-03-20
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.351 Å)
主引用文献Structural and functional study of anti-adaptor IraP-mediated regulation of RpoS proteolysis
to be published
5C90
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BU of 5c90 by Molmil
Staphylococcus aureus ClpP mutant - Y63A
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ATP-dependent Clp protease proteolytic subunit
著者Ye, F, Liu, H, Zhang, J, Gan, J, Yang, C.-G.
登録日2015-06-26
公開日2016-05-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Characterization of Gain-of-Function Mutant Provides New Insights into ClpP Structure
Acs Chem.Biol., 11, 2016
3S49
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RNA crystal structure with 2-Se-uridine modification
分子名称: POTASSIUM ION, RNA (5'-R(*GP*UP*AP*UP*AP*(RUS)P*AP*C)-3')
著者Sheng, J, Gan, J, Sun, H, Hassan, A.E.H, Jiang, S, Huang, Z.
登録日2011-05-19
公開日2011-06-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Higher Specificity of RNA Base Pairing with 2-Selenouridine
To be Published
3IFF
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BU of 3iff by Molmil
2'-SeMe-A modified DNA decamer
分子名称: DNA (5'-D(*GP*TP*AP*CP*GP*CP*GP*TP*(XUA)P*C)-3'), MAGNESIUM ION
著者Sheng, J, Gan, J, Salon, J, Huang, Z.
登録日2009-07-24
公開日2009-08-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Selenium modification at 2'-position of adenosine for nucleic acid structure studies
To be Published
3IFI
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2'-SeMe-dG modified octamer DNA
分子名称: DNA (5'-D(*GP*TP*(XUG)P*TP*AP*CP*AP*C)-3')
著者Sheng, J, Gan, J, Salon, J, Huang, Z.
登録日2009-07-24
公開日2009-08-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Synthesis and crystal structure of 2'-se-modified guanosine containing DNA.
J.Org.Chem., 75, 2010
4KW0
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Structure of Dickerson-Drew Dodecamer with 2'-MeSe-ara-G modification
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*(1TW)P*CP*G)-3'), MAGNESIUM ION
著者Jiang, S, Gan, J, Sheng, J, Sun, H, Huang, Z.
登録日2013-05-23
公開日2013-07-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Structure of Dickerson-Drew Dodecamer with 2'-MeSe-ara-G modification
TO BE PUBLISHED

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