1LEA
 
 | | SOLUTION STRUCTURE OF THE LEXA REPRESSOR DNA BINDING DETERMINED BY 1H NMR SPECTROSCOPY | | 分子名称: | LEXA REPRESSOR DNA BINDING DOMAIN | | 著者 | Fogh, R.H, Ottleben, G, Rueterjans, H, Schnarr, M, Boelens, R, Kaptein, R. | | 登録日 | 1994-05-11 | | 公開日 | 1994-08-31 | | 最終更新日 | 2024-05-22 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of the LexA repressor DNA binding domain determined by 1H NMR spectroscopy.
EMBO J., 13, 1994
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1OSL
 | | Solution structure of a dimeric lactose DNA-binding domain complexed to a nonspecific DNA sequence | | 分子名称: | 5'-D(*CP*GP*AP*TP*AP*AP*GP*AP*TP*AP*TP*CP*TP*TP*AP*TP*CP*G)-3', Lactose operon repressor | | 著者 | Kalodimos, C.G, Bonvin, A.M.J.J, Boelens, R, Kaptein, R. | | 登録日 | 2003-03-20 | | 公開日 | 2004-05-04 | | 最終更新日 | 2021-10-27 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structure and flexibility adaptation in nonspecific and specific protein-DNA complexes.
Science, 305, 2004
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1PIR
 | | SOLUTION STRUCTURE OF PORCINE PANCREATIC PHOSPHOLIPASE A2 | | 分子名称: | CALCIUM ION, PHOSPHOLIPASE A2 | | 著者 | Van Den Berg, B.D, Tessari, M, De Haas, G.H, Verheij, H.M, Boelens, R, Kaptein, R. | | 登録日 | 1994-12-22 | | 公開日 | 1995-06-03 | | 最終更新日 | 2022-02-23 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of porcine pancreatic phospholipase A2.
EMBO J., 14, 1995
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1PIS
 | | SOLUTION STRUCTURE OF PORCINE PANCREATIC PHOSPHOLIPASE A2 | | 分子名称: | CALCIUM ION, PHOSPHOLIPASE A2 | | 著者 | Van Den Berg, B.D, Tessari, M, De Haas, G.H, Verheij, H.M, Boelens, R, Kaptein, R. | | 登録日 | 1994-12-22 | | 公開日 | 1995-06-03 | | 最終更新日 | 2022-02-23 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of porcine pancreatic phospholipase A2.
EMBO J., 14, 1995
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1UR6
 | | NMR based structural model of the UbcH5B-CNOT4 complex | | 分子名称: | POTENTIAL TRANSCRIPTIONAL REPRESSOR NOT4HP, UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 2, ZINC ION | | 著者 | Dominguez, C, Bonvin, A.M.J.J, Winkler, G.S, Van Schaik, F.M.A, Timmers, H.Th.M, Boelens, R. | | 登録日 | 2003-10-27 | | 公開日 | 2004-05-07 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR, THEORETICAL MODEL | | 主引用文献 | Structural Model of the Ubch5B/Cnot4 Complex Revealed by Combining NMR, Mutagenesis, and Docking Approaches.
Structure, 12, 2004
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1W4U
 | | NMR solution structure of the ubiquitin conjugating enzyme UbcH5B | | 分子名称: | UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 2 | | 著者 | Houben, K, Dominguez, C, Van Schaik, F.M.A, Timmers, H.T.M, Bonvin, A.M.J.J, Boelens, R. | | 登録日 | 2004-07-29 | | 公開日 | 2004-11-10 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution Structure of the Ubiquitin-Conjugating Enzyme Ubch5B
J.Mol.Biol., 344, 2004
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1Z60
 | | Solution structure of the carboxy-terminal domain of human TFIIH P44 subunit | | 分子名称: | TFIIH basal transcription factor complex p44 subunit, ZINC ION | | 著者 | Kellenberger, E, Dominguez, C, Fribourg, S, Wasielewski, E, Moras, D, Poterszman, A, Boelens, R, Kieffer, B. | | 登録日 | 2005-03-21 | | 公開日 | 2005-04-12 | | 最終更新日 | 2024-05-29 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of the C-terminal domain of TFIIH P44 subunit reveals a novel type of C4C4 ring domain involved in protein-protein interactions.
J.Biol.Chem., 280, 2005
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2Y4W
 | | Solution structure of human ubiquitin conjugating enzyme Rad6b | | 分子名称: | UBIQUITIN-CONJUGATING ENZYME E2 B | | 著者 | Huang, A, Hibbert, R.G, deJong, R.N, Das, D, Sixma, T.K, Boelens, R. | | 登録日 | 2011-01-11 | | 公開日 | 2011-05-11 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Symmetry and Asymmetry of the Ring-Ring Dimer of Rad18
J.Mol.Biol., 410, 2011
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2KEK
 | | Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O3 | | 分子名称: | DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*GP*AP*GP*CP*GP*CP*AP*AP*CP*GP*CP*AP*AP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*TP*TP*GP*CP*GP*TP*TP*GP*CP*GP*CP*TP*CP*AP*CP*TP*GP*CP*CP*G)-3'), Lactose operon repressor | | 著者 | Romanuka, J, Folkers, G, Biris, N, Tishchenko, E, Wienk, H, Kaptein, R, Boelens, R. | | 登録日 | 2009-01-30 | | 公開日 | 2009-05-19 | | 最終更新日 | 2021-10-20 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
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2KEI
 | | Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1 | | 分子名称: | DNA (5'-D(*GP*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*GP*GP*AP*TP*AP*AP*CP*AP*AP*TP*TP*T)-3'), DNA (5'-D(P*AP*AP*AP*TP*TP*GP*TP*TP*AP*TP*CP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*TP*C)-3'), Lactose operon repressor | | 著者 | Romanuka, J, Folkers, G, Biris, N, Tishchenko, E, Wienk, H, Kaptein, R, Boelens, R. | | 登録日 | 2009-01-30 | | 公開日 | 2009-05-19 | | 最終更新日 | 2021-10-20 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
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2KEJ
 | | Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O2 | | 分子名称: | DNA (5'-D(*GP*AP*AP*AP*TP*GP*TP*GP*AP*GP*CP*GP*AP*GP*TP*AP*AP*CP*AP*AP*CP*CP*G)-3'), DNA (5'-D(P*CP*GP*GP*TP*TP*GP*TP*TP*AP*CP*TP*CP*GP*CP*TP*CP*AP*CP*AP*TP*TP*TP*C)-3'), Lactose operon repressor | | 著者 | Romanuka, J, Folkers, G, Biris, N, Tishchenko, E, Wienk, H, Kaptein, R, Boelens, R. | | 登録日 | 2009-01-30 | | 公開日 | 2009-05-19 | | 最終更新日 | 2021-10-20 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
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2LKC
 | | Free B.st IF2-G2 | | 分子名称: | Translation initiation factor IF-2 | | 著者 | Wienk, H, Tishchenko, E, Belardinelli, R, Tomaselli, S, Dongre, R, Spurio, R, Folkers, G.E, Gualerzi, C.O, Boelens, R. | | 登録日 | 2011-10-10 | | 公開日 | 2012-02-15 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structural Dynamics of Bacterial Translation Initiation Factor IF2.
J.Biol.Chem., 287, 2012
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2LKD
 | | IF2-G2 GDP complex | | 分子名称: | GUANOSINE-5'-DIPHOSPHATE, Translation initiation factor IF-2 | | 著者 | Wienk, H, Tishchenko, E, Belardinelli, R, Tomaselli, S, Dongre, R, Spurio, R, Folkers, G.E, Gualerzi, C.O, Boelens, R. | | 登録日 | 2011-10-10 | | 公開日 | 2012-02-15 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structural Dynamics of Bacterial Translation Initiation Factor IF2.
J.Biol.Chem., 287, 2012
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2JPD
 | | Solution structure of the ERCC1 central domain | | 分子名称: | DNA excision repair protein ERCC-1 | | 著者 | Tripsianes, K, Folkers, G, Zheng, C, Das, D, Grinstead, J.S, Kaptein, R, Boelens, R. | | 登録日 | 2007-05-06 | | 公開日 | 2007-09-04 | | 最終更新日 | 2024-05-08 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Analysis of the XPA and ssDNA-binding surfaces on the central domain of human ERCC1 reveals evidence for subfunctionalization
Nucleic Acids Res., 35, 2007
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2KN7
 | | Structure of the XPF-single strand DNA complex | | 分子名称: | DNA (5'-D(*CP*AP*GP*TP*GP*GP*CP*TP*GP*A)-3'), DNA repair endonuclease XPF | | 著者 | Das, D, Folkers, G.E, van Dijk, M, Jaspers, N.G.J, Hoeijmakers, J.H.J, Kaptein, R, Boelens, R. | | 登録日 | 2009-08-16 | | 公開日 | 2010-08-04 | | 最終更新日 | 2024-05-01 | | 実験手法 | SOLUTION NMR | | 主引用文献 | The structure of the XPF-ssDNA complex underscores the distinct roles of the XPF and ERCC1 helix- hairpin-helix domains in ss/ds DNA recognition
Structure, 20, 2012
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2LYH
 | | Structure of Faap24 residues 141-215 | | 分子名称: | Fanconi anemia-associated protein of 24 kDa | | 著者 | Wienk, H, Slootweg, J, Kaptein, R, Boelens, R, Folkers, G.E. | | 登録日 | 2012-09-18 | | 公開日 | 2013-05-01 | | 最終更新日 | 2024-05-01 | | 実験手法 | SOLUTION NMR | | 主引用文献 | The Fanconi anemia associated protein FAAP24 uses two substrate specific binding surfaces for DNA recognition.
Nucleic Acids Res., 41, 2013
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2MUT
 | | Solution structure of the F231L mutant ERCC1-XPF dimerization region | | 分子名称: | DNA excision repair protein ERCC-1, DNA repair endonuclease XPF | | 著者 | Faridounnia, M, Wienk, H, Kovacic, L, Folkers, G.E, Jaspers, N.G.J, Kaptein, R, Hoeijmakers, J.H.J, Boelens, R. | | 登録日 | 2014-09-17 | | 公開日 | 2015-06-24 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR | | 主引用文献 | The Cerebro-oculo-facio-skeletal Syndrome Point Mutation F231L in the ERCC1 DNA Repair Protein Causes Dissociation of the ERCC1-XPF Complex.
J.Biol.Chem., 290, 2015
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2K27
 | | Solution structure of Human Pax8 Paired Box Domain | | 分子名称: | Paired box protein Pax-8 | | 著者 | Codutti, L, Esposito, G, Corazza, A, Fogolari, F, Tell, G, Vascotto, C, van Ingen, H, Boelens, R, Viglino, P, Quadrifoglio, F. | | 登録日 | 2008-03-26 | | 公開日 | 2008-09-30 | | 最終更新日 | 2024-05-08 | | 実験手法 | SOLUTION NMR | | 主引用文献 | The Solution Structure of DNA-free Pax-8 Paired Box Domain Accounts for Redox Regulation of Transcriptional Activity in the Pax Protein Family.
J.Biol.Chem., 283, 2008
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2K16
 | | Solution structure of the free TAF3 PHD domain | | 分子名称: | Transcription initiation factor TFIID subunit 3, ZINC ION | | 著者 | van Ingen, H, van Schaik, F.M.A, Wienk, H, Timmers, M, Boelens, R. | | 登録日 | 2008-02-22 | | 公開日 | 2008-07-15 | | 最終更新日 | 2024-05-08 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Recognition of the H3K4me3 mark by the TAF3-PHD finger
To be Published
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2K17
 | | Solution structure of the TAF3 PHD domain in complex with a H3K4me3 peptide | | 分子名称: | H3K4me3 peptide, Transcription initiation factor TFIID subunit 3, ZINC ION | | 著者 | van Ingen, H, van Schaik, F.M.A, Wienk, H, Timmers, M, Boelens, R. | | 登録日 | 2008-02-22 | | 公開日 | 2008-07-15 | | 最終更新日 | 2023-06-14 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Recognition of the H3K4me3 mark by the TAF3-PHD finger
To be Published
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2K4D
 | | E2-c-Cbl recognition is necessary but not sufficient for ubiquitination activity | | 分子名称: | E3 ubiquitin-protein ligase CBL, ZINC ION | | 著者 | Huang, A, De Jong, R.N, Wienk, H, Winkler, S.G, Timmers, H.T.M, Boelens, R. | | 登録日 | 2008-06-06 | | 公開日 | 2009-01-20 | | 最終更新日 | 2023-06-14 | | 実験手法 | SOLUTION NMR | | 主引用文献 | E2-c-Cbl recognition is necessary but not sufficient for ubiquitination activity
J.Mol.Biol., 385, 2009
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2KXI
 | | Solution NMR structure of the apoform of NarE (NMB1343) | | 分子名称: | Uncharacterized protein | | 著者 | Koehler, C, Carlier, L, Veggi, D, Soriani, M, Pizza, M, Boelens, R, Bonvin, A.M.J.J. | | 登録日 | 2010-05-06 | | 公開日 | 2011-03-02 | | 最終更新日 | 2018-08-08 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution NMR structure of the apoform of NarE (NMB1343)
To be Published
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2MH3
 | | NMR structure of the basic helix-loop-helix region of the transcriptional repressor HES-1 | | 分子名称: | Transcription factor HES-1 | | 著者 | Wienk, H, Popovic, M, Coglievina, M, Boelens, R, Pongor, S, Pintar, A. | | 登録日 | 2013-11-15 | | 公開日 | 2014-02-05 | | 最終更新日 | 2024-05-15 | | 実験手法 | SOLUTION NMR | | 主引用文献 | The basic helix-loop-helix region of the transcriptional repressor hairy and enhancer of split 1 is preorganized to bind DNA.
Proteins, 82, 2014
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2N01
 | | NMR structure of VirB9 C-terminal domain in complex with VirB7 N-terminal domain from Xanthomonas citri's T4SS | | 分子名称: | VirB7 protein, VirB9 protein | | 著者 | Oliveira, L.C, Souza, D.P, Salinas, R.K, Wienk, H, Boelens, R, Farah, S.C. | | 登録日 | 2015-03-03 | | 公開日 | 2015-09-09 | | 最終更新日 | 2024-05-01 | | 実験手法 | SOLUTION NMR | | 主引用文献 | VirB7 and VirB9 Interactions Are Required for the Assembly and Antibacterial Activity of a Type IV Secretion System.
Structure, 24, 2016
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1D1N
 | | SOLUTION STRUCTURE OF THE FMET-TRNAFMET BINDING DOMAIN OF BECILLUS STEAROTHERMOPHILLUS TRANSLATION INITIATION FACTOR IF2 | | 分子名称: | INITIATION FACTOR 2 | | 著者 | Meunier, S, Spurio, S, Czisch, M, Wechselberger, R, Gueunneugues, M. | | 登録日 | 1999-09-20 | | 公開日 | 2000-09-20 | | 最終更新日 | 2024-05-22 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structure of the fMet-tRNA(fMet)-binding domain of B. stearothermophilus initiation factor IF2.
EMBO J., 19, 2000
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