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3A9T
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BU of 3a9t by Molmil
X-ray Structure of Bacillus pallidus D-Arabinose Isomerase Complex with L-Fucitol
Descriptor: D-arabinose isomerase, FUCITOL, MANGANESE (II) ION
Authors:Takeda, K, Yoshida, H, Izumori, K, Kamitori, S.
Deposit date:2009-11-05
Release date:2010-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:X-ray structures of Bacillus pallidusd-arabinose isomerase and its complex with l-fucitol.
Biochim.Biophys.Acta, 1804, 2010
3B0W
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BU of 3b0w by Molmil
Crystal structure of the orphan nuclear receptor ROR(gamma)t ligand-binding domain in complex with digoxin
Descriptor: DIGOXIN, Nuclear receptor ROR-gamma
Authors:Fujita-Sato, S, Ito, S, Isobe, T, Ohyama, T, Wakabayashi, K, Morishita, K, Ando, O, Isono, F.
Deposit date:2011-06-17
Release date:2011-07-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis of Digoxin That Antagonizes ROR{gamma}t Receptor Activity and Suppresses Th17 Cell Differentiation and Interleukin (IL)-17 Production
J.Biol.Chem., 286, 2011
3B0C
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BU of 3b0c by Molmil
Crystal structure of the chicken CENP-T histone fold/CENP-W complex, crystal form I
Descriptor: CITRIC ACID, Centromere protein T, Centromere protein W
Authors:Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
Deposit date:2011-06-08
Release date:2012-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold.
Cell(Cambridge,Mass.), 148, 2012
3B0B
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BU of 3b0b by Molmil
Crystal structure of the chicken CENP-S/CENP-X complex
Descriptor: Centromere protein S, Centromere protein X
Authors:Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
Deposit date:2011-06-08
Release date:2012-03-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold.
Cell(Cambridge,Mass.), 148, 2012
3B0D
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BU of 3b0d by Molmil
Crystal structure of the chicken CENP-T histone fold/CENP-W complex, crystal form II
Descriptor: CITRIC ACID, Centromere protein T, Centromere protein W
Authors:Nishino, T, Takeuchi, K, Gascoigne, K.E, Suzuki, A, Hori, T, Oyama, T, Morikawa, K, Cheeseman, I.M, Fukagawa, T.
Deposit date:2011-06-08
Release date:2012-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:CENP-T-W-S-X Forms a Unique Centromeric Chromatin Structure with a Histone-like Fold.
Cell(Cambridge,Mass.), 148, 2012
1IZ4
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BU of 1iz4 by Molmil
Pyrococcus furiosus PCNA mutant (Met73Leu/Asp143Ala): tetragonal form
Descriptor: Proliferating cell nuclear antigen
Authors:Matsumiya, S, Ishino, S, Ishino, Y, Morikawa, K.
Deposit date:2002-09-21
Release date:2003-04-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Intermolecular ion pairs maintain the toroidal structure of Pyrococcus furiosus PCNA
PROTEIN SCI., 12, 2003
2ZK1
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BU of 2zk1 by Molmil
Human peroxisome proliferator-activated receptor gamma ligand binding domain complexed with 15-deoxy-delta12,14-prostaglandin J2
Descriptor: (5E,14E)-11-oxoprosta-5,9,12,14-tetraen-1-oic acid, Peroxisome proliferator-activated receptor gamma
Authors:Waku, T, Shiraki, T, Oyama, T, Fujimoto, Y, Morikawa, K.
Deposit date:2008-03-12
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural insight into PPARgamma activation through covalent modification with endogenous fatty acids
J.Mol.Biol., 385, 2009
2ZK4
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BU of 2zk4 by Molmil
Human peroxisome proliferator-activated receptor gamma ligand binding domain complexed with 15-oxo-eicosatetraenoic acid
Descriptor: (5E,8E,11Z,13E)-15-oxoicosa-5,8,11,13-tetraenoic acid, Peroxisome proliferator-activated receptor gamma
Authors:Waku, T, Shiraki, T, Oyama, T, Fujimoto, Y, Morikawa, K.
Deposit date:2008-03-12
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structural insight into PPARgamma activation through covalent modification with endogenous fatty acids
J.Mol.Biol., 385, 2009
2ZK3
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BU of 2zk3 by Molmil
Human peroxisome proliferator-activated receptor gamma ligand binding domain complexed with 8-oxo-eicosatetraenoic acid
Descriptor: (5E,11E,14E)-8-oxoicosa-5,9,11,14-tetraenoic acid, Peroxisome proliferator-activated receptor gamma
Authors:Waku, T, Shiraki, T, Oyama, T, Fujimoto, Y, Morikawa, K.
Deposit date:2008-03-12
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural insight into PPARgamma activation through covalent modification with endogenous fatty acids
J.Mol.Biol., 385, 2009
1IXZ
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BU of 1ixz by Molmil
Crystal structure of the FtsH ATPase domain from Thermus thermophilus
Descriptor: ATP-dependent metalloprotease FtsH, MERCURY (II) ION, SULFATE ION
Authors:Niwa, H, Tsuchiya, D, Makyio, H, Yoshida, M, Morikawa, K.
Deposit date:2002-07-10
Release date:2002-11-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Hexameric ring structure of the ATPase domain of the membrane-integrated metalloprotease FtsH from Thermus thermophilus HB8
Structure, 10, 2002
1IY1
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BU of 1iy1 by Molmil
Crystal structure of the FtsH ATPase domain with ADP from Thermus thermophilus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent metalloprotease FtsH
Authors:Niwa, H, Tsuchiya, D, Makyio, H, Yoshida, M, Morikawa, K.
Deposit date:2002-07-10
Release date:2002-11-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Hexameric ring structure of the ATPase domain of the membrane-integrated metalloprotease FtsH from Thermus thermophilus HB8
Structure, 10, 2002
1IY2
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BU of 1iy2 by Molmil
Crystal structure of the FtsH ATPase domain from Thermus thermophilus
Descriptor: ATP-dependent metalloprotease FtsH, SULFATE ION
Authors:Niwa, H, Tsuchiya, D, Makyio, H, Yoshida, M, Morikawa, K.
Deposit date:2002-07-10
Release date:2002-11-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Hexameric ring structure of the ATPase domain of the membrane-integrated metalloprotease FtsH from Thermus thermophilus HB8
Structure, 10, 2002
2ZK2
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BU of 2zk2 by Molmil
Human peroxisome proliferator-activated receptor gamma ligand binding domain complexed with glutathion conjugated 15-deoxy-delta12,14-prostaglandin J2
Descriptor: (5E,14E)-11-oxoprosta-5,9,12,14-tetraen-1-oic acid, GLUTATHIONE, Peroxisome proliferator-activated receptor gamma
Authors:Waku, T, Shiraki, T, Oyama, T, Fujimoto, Y, Morikawa, K.
Deposit date:2008-03-12
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural insight into PPARgamma activation through covalent modification with endogenous fatty acids
J.Mol.Biol., 385, 2009
1IY0
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BU of 1iy0 by Molmil
Crystal structure of the FtsH ATPase domain with AMP-PNP from Thermus thermophilus
Descriptor: ATP-dependent metalloprotease FtsH, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Niwa, H, Tsuchiya, D, Makyio, H, Yoshida, M, Morikawa, K.
Deposit date:2002-07-10
Release date:2002-11-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Hexameric ring structure of the ATPase domain of the membrane-integrated metalloprotease FtsH from Thermus thermophilus HB8
Structure, 10, 2002
1ISQ
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BU of 1isq by Molmil
Pyrococcus furiosus PCNA complexed with RFCL PIP-box peptide
Descriptor: Proliferating Cell Nuclear Antigen, replication factor C large subunit
Authors:Matsumiya, S, Ishino, S, Ishino, Y, Morikawa, K.
Deposit date:2001-12-19
Release date:2002-10-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Physical interaction between proliferating cell nuclear antigen and replication factor C from Pyrococcus furiosus
Genes Cells, 7, 2002
1IZ5
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BU of 1iz5 by Molmil
Pyrococcus furiosus PCNA mutant (Met73Leu, Asp143Ala, Asp147Ala): orthorhombic form
Descriptor: Proliferating cell nuclear antigen
Authors:Matsumiya, S, Ishino, S, Ishino, Y, Morikawa, K.
Deposit date:2002-09-23
Release date:2003-04-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Intermolecular ion pairs maintain the toroidal structure of Pyrococcus furiosus PCNA
PROTEIN SCI., 12, 2003
3A2F
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BU of 3a2f by Molmil
Crystal Structure of Pyrococcus furiosus DNA polymerase/PCNA monomer mutant complex
Descriptor: DNA polymerase, DNA polymerase sliding clamp
Authors:Nishida, H, Ishino, Y, Morikawa, K.
Deposit date:2009-05-15
Release date:2009-11-03
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Structural determinant for switching between the polymerase and exonuclease modes in the PCNA-replicative DNA polymerase complex
To be Published
3ANW
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BU of 3anw by Molmil
A protein complex essential initiation of DNA replication
Descriptor: Putative uncharacterized protein
Authors:Oyama, T, Shirai, T, Nagasawa, N, Ishino, Y, Morikawa, K.
Deposit date:2010-09-10
Release date:2011-07-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Architectures of archaeal GINS complexes, essential DNA replication initiation factors
Bmc Biol., 9, 2011
2ZK5
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BU of 2zk5 by Molmil
Human peroxisome proliferator-activated receptor gamma ligand binding domain complexed with nitro-233
Descriptor: 3-[5-(2-nitropent-1-en-1-yl)furan-2-yl]benzoic acid, Peroxisome proliferator-activated receptor gamma
Authors:Waku, T, Shiraki, T, Oyama, T, Fujimoto, Y, Morikawa, K.
Deposit date:2008-03-12
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural insight into PPARgamma activation through covalent modification with endogenous fatty acids
J.Mol.Biol., 385, 2009
2ZK0
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BU of 2zk0 by Molmil
Human peroxisome proliferator-activated receptor gamma ligand binding domain
Descriptor: Peroxisome proliferator-activated receptor gamma
Authors:Waku, T, Shiraki, T, Oyama, T, Fujimoto, Y, Morikawa, K.
Deposit date:2008-03-12
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural insight into PPARgamma activation through covalent modification with endogenous fatty acids
J.Mol.Biol., 385, 2009
2ZMF
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BU of 2zmf by Molmil
Crystal structure of the C-terminal GAF domain of human phosphodiesterase 10A
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A
Authors:Handa, N, Kishishita, S, Mizohata, E, Omori, K, Kotera, J, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-17
Release date:2008-04-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the GAF-B Domain from Human Phosphodiesterase 10A Complexed with Its Ligand, cAMP
J.Biol.Chem., 283, 2008
2EGN
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BU of 2egn by Molmil
Crystal Structure of Tamalin PDZ Domain in Complex with mGluR5 C-terminal Peptide
Descriptor: General receptor for phosphoinositides 1-associated scaffold protein, mGluR5 C-terminal peptide
Authors:Sugi, T, Oyama, T, Muto, T, Nakanishi, S, Morikawa, K, Jingami, H.
Deposit date:2007-03-01
Release date:2007-05-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of autoinhibitory PDZ domain of Tamalin: implications for metabotropic glutamate receptor trafficking regulation
Embo J., 26, 2007
2E4Z
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BU of 2e4z by Molmil
Crystal structure of the ligand-binding region of the group III metabotropic glutamate receptor
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Metabotropic glutamate receptor 7
Authors:Muto, T, Tsuchiya, D, Morikawa, K, Jingami, H.
Deposit date:2006-12-17
Release date:2007-02-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structures of the extracellular regions of the group II/III metabotropic glutamate receptors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EGK
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BU of 2egk by Molmil
Crystal Structure of Tamalin PDZ-Intrinsic Ligand Fusion Protein
Descriptor: General receptor for phosphoinositides 1-associated scaffold protein, PHOSPHATE ION
Authors:Sugi, T, Oyama, T, Muto, T, Nakanishi, S, Morikawa, K, Jingami, H.
Deposit date:2007-03-01
Release date:2007-05-08
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structures of autoinhibitory PDZ domain of Tamalin: implications for metabotropic glutamate receptor trafficking regulation
Embo J., 26, 2007
2CFM
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BU of 2cfm by Molmil
ATP-DEPENDENT DNA LIGASE FROM PYROCOCCUS FURIOSUS
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, THERMOSTABLE DNA LIGASE
Authors:Nishida, H, Ishino, Y, Morikawa, K.
Deposit date:2006-02-22
Release date:2006-07-12
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Closed Structure of an Archaeal DNA Ligase from Pyrococcus Furiosus.
J.Mol.Biol., 360, 2006

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