2E1C
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![BU of 2e1c by Molmil](/molmil-images/mine/2e1c) | Structure of Putative HTH-type transcriptional regulator PH1519/DNA Complex | Descriptor: | DNA (5'-D(*DAP*DGP*DTP*DGP*DAP*DAP*DAP*DAP*DTP*DTP*DTP*DTP*DTP*DCP*DAP*DCP*DA)-3'), DNA (5'-D(*DTP*DGP*DTP*DGP*DAP*DAP*DAP*DAP*DAP*DTP*DTP*DTP*DTP*DCP*DAP*DCP*DT)-3'), Putative HTH-type transcriptional regulator PH1519 | Authors: | Koike, H, Suzuki, M. | Deposit date: | 2006-10-24 | Release date: | 2007-12-04 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Feast/Famine Regulation by Transcription Factor FL11 for the Survival of the Hyperthermophilic Archaeon Pyrococcus OT3. Structure, 15, 2007
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2ZNZ
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![BU of 2znz by Molmil](/molmil-images/mine/2znz) | Crystal structure of FFRP | Descriptor: | LYSINE, Uncharacterized HTH-type transcriptional regulator PH1519 | Authors: | Yamada, M, Suzuki, M. | Deposit date: | 2008-05-02 | Release date: | 2009-03-17 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.39 Å) | Cite: | Interactions between the archaeal transcription repressor FL11 and its coregulators lysine and arginine. Proteins, 74, 2009
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3VU9
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![BU of 3vu9 by Molmil](/molmil-images/mine/3vu9) | Crystal Structure of Psy3-Csm2 complex | Descriptor: | 1,2-ETHANEDIOL, Chromosome segregation in meiosis protein 2, Platinum sensitivity protein 3 | Authors: | Tawaramoto, M, Sasanuma, H, Hosaka, H, Lao, J.P, Sanda, E, Suzuki, M, Yamashita, E, Hunter, N, Shinohara, M, Nakagawa, A, Shinohara, A. | Deposit date: | 2012-06-23 | Release date: | 2013-04-10 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | A new protein complex promoting the assembly of Rad51 filaments Nat Commun, 4, 2013
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2ZIB
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![BU of 2zib by Molmil](/molmil-images/mine/2zib) | Crystal structure analysis of calcium-independent type II antifreeze protein | Descriptor: | SULFATE ION, Type II antifreeze protein | Authors: | Nishimiya, Y, Sato, R, Kondo, H, Noro, N, Sugimoto, H, Suzuki, M, Tsuda, S. | Deposit date: | 2008-02-14 | Release date: | 2008-08-19 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.34 Å) | Cite: | Crystal structure and mutational analysis of Ca2+-independent type II antifreeze protein from longsnout poacher, Brachyopsis rostratus J.Mol.Biol., 382, 2008
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2ZUQ
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![BU of 2zuq by Molmil](/molmil-images/mine/2zuq) | Crystal structure of DsbB-Fab complex | Descriptor: | Disulfide bond formation protein B, Fab fragment heavy chain, Fab fragment light chain, ... | Authors: | Inaba, K, Suzuki, M, Murakami, S. | Deposit date: | 2008-10-28 | Release date: | 2009-04-14 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | Dynamic nature of disulphide bond formation catalysts revealed by crystal structures of DsbB Embo J., 28, 2009
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3APQ
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![BU of 3apq by Molmil](/molmil-images/mine/3apq) | |
3APO
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![BU of 3apo by Molmil](/molmil-images/mine/3apo) | Crystal structure of full-length ERdj5 | Descriptor: | DnaJ homolog subfamily C member 10 | Authors: | Inaba, K, Suzuki, M, Nagata, K. | Deposit date: | 2010-10-20 | Release date: | 2011-04-20 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Structural basis of an ERAD pathway mediated by the ER-resident protein disulfide reductase ERdj5. Mol.Cell, 41, 2011
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3APS
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![BU of 3aps by Molmil](/molmil-images/mine/3aps) | Crystal structure of Trx4 domain of ERdj5 | Descriptor: | DnaJ homolog subfamily C member 10, GLYCEROL, SULFATE ION | Authors: | Inaba, K, Suzuki, M, Nagata, K. | Deposit date: | 2010-10-20 | Release date: | 2011-04-20 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural basis of an ERAD pathway mediated by the ER-resident protein disulfide reductase ERdj5. Mol.Cell, 41, 2011
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2ZUP
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![BU of 2zup by Molmil](/molmil-images/mine/2zup) | Updated crystal structure of DsbB-DsbA complex from E. coli | Descriptor: | Disulfide bond formation protein B, Thiol:disulfide interchange protein dsbA, UBIQUINONE-1, ... | Authors: | Inaba, K, Suzuki, M, Murakami, S, Nakagawa, A. | Deposit date: | 2008-10-28 | Release date: | 2009-04-14 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.7 Å) | Cite: | Dynamic nature of disulphide bond formation catalysts revealed by crystal structures of DsbB Embo J., 28, 2009
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3AXA
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![BU of 3axa by Molmil](/molmil-images/mine/3axa) | Crystal structure of afadin PDZ domain in complex with the C-terminal peptide from nectin-3 | Descriptor: | Afadin, Nectin-3 | Authors: | Fujiwara, Y, Goda, N, Narita, H, Satomura, K, Nakagawa, A, Sakisaka, T, Suzuki, M, Hiroaki, H. | Deposit date: | 2011-03-31 | Release date: | 2012-04-25 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.78 Å) | Cite: | Crystal structure of afadin PDZ domain-nectin-3 complex shows the structural plasticity of the ligand-binding site. Protein Sci., 24, 2015
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3VQF
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![BU of 3vqf by Molmil](/molmil-images/mine/3vqf) | Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein | Descriptor: | E3 ubiquitin-protein ligase LNX | Authors: | Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H. | Deposit date: | 2012-03-22 | Release date: | 2013-03-27 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.199 Å) | Cite: | Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase To be Published
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3VK9
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![BU of 3vk9 by Molmil](/molmil-images/mine/3vk9) | Crystal structure of delta-class glutathione transferase from silkmoth | Descriptor: | GLYCEROL, Glutathione S-transferase delta | Authors: | Kakuta, Y, Usuda, K, Higashiura, A, Suzuki, M, Nakagawa, A, Kimura, M, Yamamoto, K. | Deposit date: | 2011-11-10 | Release date: | 2012-10-03 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.001 Å) | Cite: | Structural basis for catalytic activity of a silkworm Delta-class glutathione transferase Biochim.Biophys.Acta, 1820, 2012
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3VQG
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![BU of 3vqg by Molmil](/molmil-images/mine/3vqg) | Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein | Descriptor: | C-terminal peptide from Immunoglobulin superfamily member 5, E3 ubiquitin-protein ligase LNX, SULFATE ION | Authors: | Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H. | Deposit date: | 2012-03-23 | Release date: | 2013-03-27 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.35 Å) | Cite: | Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase To be Published
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3WUN
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![BU of 3wun by Molmil](/molmil-images/mine/3wun) | |
3WR2
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![BU of 3wr2 by Molmil](/molmil-images/mine/3wr2) | |
3VRP
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![BU of 3vrp by Molmil](/molmil-images/mine/3vrp) | Crystal structure of the tyrosine kinase binding domain of Cbl-c in complex with phospho-EGFR peptide | Descriptor: | CALCIUM ION, Epidermal growth factor receptor, Signal transduction protein CBL-C | Authors: | Takeshita, K, Tezuka, T, Isozaki, Y, Yamashita, E, Suzuki, M, Yamanashi, Y, Yamamoto, T, Nakagawa, A. | Deposit date: | 2012-04-13 | Release date: | 2013-03-06 | Method: | X-RAY DIFFRACTION (1.52 Å) | Cite: | Structural flexibility regulates phosphopeptide-binding activity of the tyrosine kinase binding domain of Cbl-c. J.Biochem., 152, 2012
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3VRN
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![BU of 3vrn by Molmil](/molmil-images/mine/3vrn) | Crystal structure of the tyrosine kinase binding domain of Cbl-c | Descriptor: | CALCIUM ION, Signal transduction protein CBL-C | Authors: | Takeshita, K, Tezuka, T, Isozaki, Y, Yamashita, E, Suzuki, M, Yamanashi, Y, Yamamoto, T, Nakagawa, A. | Deposit date: | 2012-04-13 | Release date: | 2013-03-06 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.64 Å) | Cite: | Structural flexibility regulates phosphopeptide-binding activity of the tyrosine kinase binding domain of Cbl-c J.Biochem., 152, 2012
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3VRQ
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![BU of 3vrq by Molmil](/molmil-images/mine/3vrq) | Crystal structure of the tyrosine kinase binding domain of Cbl-c (PL mutant) | Descriptor: | CALCIUM ION, Signal transduction protein CBL-C | Authors: | Takeshita, K, Tezuka, T, Isozaki, Y, Yamashita, E, Suzuki, M, Yamanashi, Y, Yamamoto, T, Nakagawa, A. | Deposit date: | 2012-04-13 | Release date: | 2013-03-06 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.39 Å) | Cite: | Structural flexibility regulates phosphopeptide-binding activity of the tyrosine kinase binding domain of Cbl-c. J.Biochem., 152, 2012
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3VRR
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![BU of 3vrr by Molmil](/molmil-images/mine/3vrr) | Crystal structure of the tyrosine kinase binding domain of Cbl-c (PL mutant) in complex with phospho-EGFR peptide | Descriptor: | CALCIUM ION, Epidermal growth factor receptor, Signal transduction protein CBL-C | Authors: | Takeshita, K, Tezuka, T, Isozaki, Y, Yamashita, E, Suzuki, M, Yamanashi, Y, Yamamoto, T, Nakagawa, A. | Deposit date: | 2012-04-13 | Release date: | 2013-03-06 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural flexibility regulates phosphopeptide-binding activity of the tyrosine kinase binding domain of Cbl-c. J.Biochem., 152, 2012
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3VRO
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![BU of 3vro by Molmil](/molmil-images/mine/3vro) | Crystal structure of the tyrosine kinase binding domain of Cbl-c in complex with phospho-Src peptide | Descriptor: | CALCIUM ION, Proto-oncogene tyrosine-protein kinase Src, Signal transduction protein CBL-C | Authors: | Takeshita, K, Tezuka, T, Isozaki, Y, Yamashita, E, Suzuki, M, Yamanashi, Y, Yamamoto, T, Nakagawa, A. | Deposit date: | 2012-04-13 | Release date: | 2013-03-06 | Last modified: | 2017-11-22 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structural flexibility regulates phosphopeptide-binding activity of the tyrosine kinase binding domain of Cbl-c. J.Biochem., 152, 2012
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2D05
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![BU of 2d05 by Molmil](/molmil-images/mine/2d05) | Chitosanase From Bacillus circulans mutant K218P | Descriptor: | Chitosanase, SULFATE ION | Authors: | Fukamizo, T, Amano, S, Yamaguchi, K, Yoshikawa, T, Katsumi, T, Saito, J, Suzuki, M, Miki, K, Nagata, Y, Ando, A. | Deposit date: | 2005-07-25 | Release date: | 2005-12-06 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Bacillus circulans MH-K1 Chitosanase: Amino Acid Residues Responsible for Substrate Binding J.Biochem.(Tokyo), 138, 2005
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2E0Z
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![BU of 2e0z by Molmil](/molmil-images/mine/2e0z) | Crystal structure of virus-like particle from Pyrococcus furiosus | Descriptor: | Virus-like particle | Authors: | Akita, F, Chong, K.T, Tanaka, H, Yamashita, E, Miyazaki, N, Nakaishi, Y, Namba, K, Ono, Y, Suzuki, M, Tsukihara, T, Nakagawa, A. | Deposit date: | 2006-10-16 | Release date: | 2007-04-17 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (3.6 Å) | Cite: | The Crystal Structure of a Virus-like Particle from the Hyperthermophilic Archaeon Pyrococcus furiosus Provides Insight into the Evolution of Viruses J.Mol.Biol., 368, 2007
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2ZPL
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![BU of 2zpl by Molmil](/molmil-images/mine/2zpl) | Crystal structure analysis of PDZ domain A | Descriptor: | GLYCEROL, NICKEL (II) ION, Regulator of sigma E protease | Authors: | Inaba, K, Suzuki, M. | Deposit date: | 2008-07-17 | Release date: | 2008-10-21 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal structure analysis of PDZ-domain A To be Published
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2ZPM
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![BU of 2zpm by Molmil](/molmil-images/mine/2zpm) | |
3AHR
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![BU of 3ahr by Molmil](/molmil-images/mine/3ahr) | Inactive human Ero1 | Descriptor: | ERO1-like protein alpha, FLAVIN-ADENINE DINUCLEOTIDE | Authors: | Inaba, K, Sitia, R, Suzuki, M. | Deposit date: | 2010-04-26 | Release date: | 2010-12-22 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.07 Å) | Cite: | Crystal structures of human Ero1-alpha reveal the mechanisms of regulated and targeted oxidation of PDI Embo J., 29, 2010
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