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2ZUR
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BU of 2zur by Molmil
Crystal Structure of Rh(nbd)/apo-Fr
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
Authors:Abe, S, Hirata, K, Ueno, T, Shimizu, N, Yamamoto, M, Takata, M, Watanabe, Y.
Deposit date:2008-10-28
Release date:2009-06-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Polymerization of phenylacetylene by rhodium complexes within a discrete space of apo-ferritin
J.Am.Chem.Soc., 131, 2009
2Z5Q
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BU of 2z5q by Molmil
Apo-Fr with intermediate content of Pd ion
Descriptor: CADMIUM ION, Ferritin light chain, GLYCEROL, ...
Authors:Ueno, T, Hirata, K, Abe, M, Suzuki, M, Abe, S, Shimizu, N, Yamamoto, M, Takata, M, Watanabe, Y.
Deposit date:2007-07-16
Release date:2008-07-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Process of accumulation of metal ions on the interior surface of apo-ferritin: crystal structures of a series of apo-ferritins containing variable quantities of Pd(II) ions.
J.Am.Chem.Soc., 131, 2009
3A93
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BU of 3a93 by Molmil
Crystal structure of hen egg white lysozyme soaked with 30mM RhCl3
Descriptor: CHLORIDE ION, Lysozyme C, RHODIUM(III) ION, ...
Authors:Abe, S, Koshiyama, T, Ohki, T, Hikage, T, Watanabe, Y, Ueno, T.
Deposit date:2009-10-15
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Elucidation of Metal-Ion Accumulation Induced by Hydrogen Bonds on Protein Surfaces by Using Porous Lysozyme Crystals Containing Rh(III) Ions as the Model Surfaces
Chemistry, 16, 2010
3A94
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BU of 3a94 by Molmil
Crystal structure of hen egg white lysozyme soaked with 100mM RhCl3
Descriptor: CHLORIDE ION, Lysozyme C, RHODIUM(III) ION, ...
Authors:Abe, S, Koshiyama, T, Ohki, T, Hikage, T, Watanabe, Y, Ueno, T.
Deposit date:2009-10-15
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Elucidation of Metal-Ion Accumulation Induced by Hydrogen Bonds on Protein Surfaces by Using Porous Lysozyme Crystals Containing Rh(III) Ions as the Model Surfaces
Chemistry, 16, 2010
3A90
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BU of 3a90 by Molmil
Crystal structure of hen egg white lysozyme soaked with 1mM RhCl3
Descriptor: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
Authors:Abe, S, Koshiyama, T, Ohki, T, Hikage, T, Watanabe, Y, Ueno, T.
Deposit date:2009-10-15
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Elucidation of Metal-Ion Accumulation Induced by Hydrogen Bonds on Protein Surfaces by Using Porous Lysozyme Crystals Containing Rh(III) Ions as the Model Surfaces
Chemistry, 16, 2010
3A96
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BU of 3a96 by Molmil
Crystal structure of hen egg white lysozyme soaked with 100mM RhCl3 at pH2.2
Descriptor: CHLORIDE ION, Lysozyme C, RHODIUM(III) ION, ...
Authors:Abe, S, Koshiyama, T, Ohki, T, Hikage, T, Watanabe, Y, Ueno, T.
Deposit date:2009-10-15
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Elucidation of Metal-Ion Accumulation Induced by Hydrogen Bonds on Protein Surfaces by Using Porous Lysozyme Crystals Containing Rh(III) Ions as the Model Surfaces
Chemistry, 16, 2010
2Z68
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BU of 2z68 by Molmil
Crystal Structure Of An Artificial Metalloprotein: Cr[N-salicylidene-4-amino-3-hydroxyhydrocinnamic acid]/Wild Type Heme oxygenase
Descriptor: Heme oxygenase, SODIUM ION, SULFATE ION, ...
Authors:Yokoi, N, Unno, M, Ueno, T, Ikeda-Saito, M, Watanabe, Y.
Deposit date:2007-07-24
Release date:2007-08-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Ligand design for improvement of thermal stabilityof metal complex/protein hybrids
To be Published
3A91
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BU of 3a91 by Molmil
Crystal structure of hen egg white lysozyme soaked with 5mM RhCl3
Descriptor: CHLORIDE ION, Lysozyme C, RHODIUM(III) ION, ...
Authors:Abe, S, Koshiyama, T, Ohki, T, Hikage, T, Watanabe, Y, Ueno, T.
Deposit date:2009-10-15
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Elucidation of Metal-Ion Accumulation Induced by Hydrogen Bonds on Protein Surfaces by Using Porous Lysozyme Crystals Containing Rh(III) Ions as the Model Surfaces
Chemistry, 16, 2010
3A8Z
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BU of 3a8z by Molmil
Crystal structure of hen egg white lysozyme
Descriptor: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
Authors:Abe, S, Koshiyama, T, Ohki, T, Hikage, T, Watanabe, Y, Ueno, T.
Deposit date:2009-10-15
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Elucidation of Metal-Ion Accumulation Induced by Hydrogen Bonds on Protein Surfaces by Using Porous Lysozyme Crystals Containing Rh(III) Ions as the Model Surfaces
Chemistry, 16, 2010
3AJV
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BU of 3ajv by Molmil
Splicing endonuclease from Aeropyrum pernix
Descriptor: CHLORIDE ION, GLYCEROL, Putative uncharacterized protein, ...
Authors:Yoshinari, S, Watanabe, Y, Okuda, M, Shiba, T, Inaoka, K.D, Kurisu, G.
Deposit date:2010-06-19
Release date:2010-11-17
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Conserved Lysine Residue in the Crenarchaea-Specific Loop is Important for the Crenarchaeal Splicing Endonuclease Activity.
J.Mol.Biol., 405, 2011
3AF9
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BU of 3af9 by Molmil
Crystal Structure of Pd(allyl)/apo-C48AFr
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
Authors:Abe, S, Hikage, T, Watanabe, Y, Kitagawa, S, Ueno, T.
Deposit date:2010-02-24
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mechanism of Accumulation and Incorporation of Organometallic Pd Complexes into the Protein Nanocage of apo-Ferritin.
Inorg.Chem., 49, 2010
3AF7
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BU of 3af7 by Molmil
Crystal Structure of 25Pd(allyl)/apo-Fr
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
Authors:Abe, S, Hikage, T, Watanabe, Y, Kitagawa, S, Ueno, T.
Deposit date:2010-02-24
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Mechanism of Accumulation and Incorporation of Organometallic Pd Complexes into the Protein Nanocage of apo-Ferritin.
Inorg.Chem., 49, 2010
5JGF
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BU of 5jgf by Molmil
Crystal structure of mApe1
Descriptor: Vacuolar aminopeptidase 1, ZINC ION
Authors:Noda, N.N, Adachi, W, Inagaki, F.
Deposit date:2016-04-20
Release date:2016-06-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural Basis for Receptor-Mediated Selective Autophagy of Aminopeptidase I Aggregates
Cell Rep, 16, 2016
5JHC
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BU of 5jhc by Molmil
Crystal structure of the self-assembled propeptides from Ape1
Descriptor: Vacuolar aminopeptidase 1
Authors:Yamasaki, A, Noda, N.N.
Deposit date:2016-04-20
Release date:2016-06-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Basis for Receptor-Mediated Selective Autophagy of Aminopeptidase I Aggregates
Cell Rep, 16, 2016
1WQV
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BU of 1wqv by Molmil
Human Factor Viia-Tissue Factor Complexed with propylsulfonamide-D-Thr-Met-p-aminobenzamidine
Descriptor: CALCIUM ION, Coagulation factor VII, N-[DIHYDROXY(PROPYL)-LAMBDA~4~-SULFANYL]THREONYL-N~1~-{4-[AMINO(IMINO)METHYL]BENZYL}METHIONINAMIDE, ...
Authors:Kadono, S, Sakamoto, A, Kikuchi, Y, Oh-eda, M, Yabuta, N, Koga, T, Hattori, K, Shiraishi, T, Haramura, M, Kodama, H.
Deposit date:2004-10-02
Release date:2005-10-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of human factor VIIa/tissue factor in complex with peptide mimetic inhibitor
Biochem.Biophys.Res.Commun., 324, 2004
7SGE
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BU of 7sge by Molmil
I53-50 nanoparticle core reconstructed from GPC-I53-50NP by focused refinement
Descriptor: I53-50B component, Josiah GPCysR4-I53-50A - nanoparticle component
Authors:Antanasijevic, A, Brouwer, P.J.M, Ward, A.B.
Deposit date:2021-10-05
Release date:2022-10-12
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Lassa virus glycoprotein nanoparticles elicit neutralizing antibody responses and protection.
Cell Host Microbe, 30, 2022
7SGF
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BU of 7sgf by Molmil
Lassa virus glycoprotein construct (Josiah GPC-I53-50A) in complex with LAVA01 antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Antanasijevic, A, Brouwer, P.J.M, Ward, A.B.
Deposit date:2021-10-05
Release date:2022-10-12
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (4.41 Å)
Cite:Lassa virus glycoprotein nanoparticles elicit neutralizing antibody responses and protection.
Cell Host Microbe, 30, 2022
7SGD
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BU of 7sgd by Molmil
Lassa virus glycoprotein construct(Josiah GPCysR4) recovered from GPC-I53-50 nanoparticle by localized reconstruction
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Antanasijevic, A, Brouwer, P.J.M, Ward, A.B.
Deposit date:2021-10-05
Release date:2022-10-12
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:Lassa virus glycoprotein nanoparticles elicit neutralizing antibody responses and protection.
Cell Host Microbe, 30, 2022
5SIC
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BU of 5sic by Molmil
MOLECULAR RECOGNITION AT THE ACTIVE SITE OF SUBTILISIN BPN': CRYSTALLOGRAPHIC STUDIES USING GENETICALLY ENGINEERED PROTEINACEOUS INHIBITOR SSI (STREPTOMYCES SUBTILISIN INHIBITOR)
Descriptor: CALCIUM ION, SUBTILISIN BPN', SUBTILISIN INHIBITOR (SSI)
Authors:Mitsui, Y, Takeuchi, Y, Nakamura, K.T.
Deposit date:1991-11-18
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular recognition at the active site of subtilisin BPN': crystallographic studies using genetically engineered proteinaceous inhibitor SSI (Streptomyces subtilisin inhibitor).
Protein Eng., 4, 1991
3SSI
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BU of 3ssi by Molmil
PROTEINASE INHIBITOR SSI (STREPTOMYCES SUBTILISIN, INHIBITOR) FROM STREPTOMYCES ALBOGRISEOLUS
Descriptor: STREPTOMYCES SUBTILISIN INHIBITOR
Authors:Suzuki, T, Nonaka, T, Mitsui, Y.
Deposit date:1996-03-01
Release date:1996-08-17
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Modulation of the Protein Proteinase Inhibitor Ssi (Streptomyces Subtilisin Inhibitor)
To be Published
6OZC
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BU of 6ozc by Molmil
BG505 SOSIP.664 with 2G12 Fab2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2G12 Fab Heavy chain, ...
Authors:Cottrell, C.A, Ward, A.B.
Deposit date:2019-05-15
Release date:2020-05-20
Last modified:2020-08-19
Method:ELECTRON MICROSCOPY (3.79 Å)
Cite:Networks of HIV-1 Envelope Glycans Maintain Antibody Epitopes in the Face of Glycan Additions and Deletions.
Structure, 28, 2020
1O16
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BU of 1o16 by Molmil
RECOMBINANT SPERM WHALE MYOGLOBIN H64D/V68S/D122N MUTANT (MET)
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Phillips Jr, G.N.
Deposit date:2002-10-25
Release date:2003-11-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Molecular engineering of myoglobin: influence of residue 68 on the rate and the enantioselectivity of oxidation reactions catalyzed by H64D/V68X myoglobin
Biochemistry, 42, 2003
5GN7
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BU of 5gn7 by Molmil
Crystal structure of alternative oxidase from Trypanosoma brucei brucei complexed with cumarin derivative-17
Descriptor: 4-[[4-(4-methoxyphenyl)piperazin-1-yl]methyl]-7,8-bis(oxidanyl)chromen-2-one, Alternative oxidase, mitochondrial, ...
Authors:Balogun, E.O, Inaoka, D.K, Shiba, T, Tsuge, T, May, B, Sato, T, Kido, Y, Takeshi, N, Aoki, T, Honma, T, Tanaka, A, Inoue, M, Matsuoka, S, Michels, P.A.M, Watanabe, Y, Moore, A.L, Harada, S, Kita, K.
Deposit date:2016-07-19
Release date:2017-07-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Discovery of trypanocidal coumarins with dual inhibition of both the glycerol kinase and alternative oxidase ofTrypanosoma brucei brucei.
Faseb J., 33, 2019
5GN9
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BU of 5gn9 by Molmil
Crystal structure of alternative oxidase from Trypanosoma brucei brucei complexed with cumarin derivative-17b
Descriptor: 4-butyl-7,8-bis(oxidanyl)chromen-2-one, Alternative oxidase, mitochondrial, ...
Authors:Balogun, E.O, Inaoka, D.K, Shiba, T, Tsuge, T, May, B, Sato, T, Kido, Y, Takeshi, N, Aoki, T, Honma, T, Tanaka, A, Inoue, M, Matsuoka, S, Michels, P.A.M, Watanabe, Y, Moore, A.L, Harada, S, Kita, K.
Deposit date:2016-07-19
Release date:2017-07-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Discovery of trypanocidal coumarins with dual inhibition of both the glycerol kinase and alternative oxidase ofTrypanosoma brucei brucei.
Faseb J., 33, 2019
5GN5
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BU of 5gn5 by Molmil
Crystal structure of glycerol kinase from Trypanosoma brucei gambiense complexed with cumarin derivative-17
Descriptor: 4-[[4-(4-methoxyphenyl)piperazin-1-yl]methyl]-7,8-bis(oxidanyl)chromen-2-one, GLYCEROL, Glycerol kinase
Authors:Balogun, E.O, Inaoka, D.K, Shiba, T, Tsuge, T, May, B, Sato, T, Kido, Y, Takeshi, N, Aoki, T, Honma, T, Tanaka, A, Inoue, M, Matsuoka, S, Michels, P.A.M, Watanabe, Y, Moore, A.L, Harada, S, Kita, K.
Deposit date:2016-07-19
Release date:2017-07-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Discovery of trypanocidal coumarins with dual inhibition of both the glycerol kinase and alternative oxidase ofTrypanosoma brucei brucei.
Faseb J., 33, 2019

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