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7W2F
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BU of 7w2f by Molmil
An open-like conformation of the sigma-1 receptor from Xenopus laevis complexed with PRE084 by co-crystallization
Descriptor: 2-morpholin-4-ylethyl 1-phenylcyclohexane-1-carboxylate, Sigma non-opioid intracellular receptor 1, octyl beta-D-glucopyranoside
Authors:Meng, F, Sun, Z, Zhou, X.
Deposit date:2021-11-23
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:An open-like conformation of the sigma-1 receptor reveals its ligand entry pathway.
Nat Commun, 13, 2022
7Y5G
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BU of 7y5g by Molmil
Cryo-EM structure of a eukaryotic ZnT8 in the presence of zinc
Descriptor: ZINC ION, Zinc transporter 8
Authors:Zhang, S, Fu, C, Luo, Y, Sun, Z, Su, Z, Zhou, X.
Deposit date:2022-06-17
Release date:2022-12-14
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.85 Å)
Cite:Cryo-EM structure of a eukaryotic zinc transporter at a low pH suggests its Zn 2+ -releasing mechanism.
J.Struct.Biol., 215, 2022
7Y5H
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BU of 7y5h by Molmil
Cryo-EM structure of a eukaryotic ZnT8 at a low pH
Descriptor: ZINC ION, Zinc transporter 8
Authors:Zhang, S, Fu, C, Luo, Y, Sun, Z, Su, Z, Zhou, X.
Deposit date:2022-06-17
Release date:2022-12-14
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Cryo-EM structure of a eukaryotic zinc transporter at a low pH suggests its Zn 2+ -releasing mechanism.
J.Struct.Biol., 215, 2022
7WD4
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BU of 7wd4 by Molmil
Crystal structure of the Ilheus virus helicase: implications for enzyme function and drug design
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, NS3 helicase
Authors:Wang, D.P, Wang, M.Y, Zhou, X, Wang, W.M, Cao, J.M.
Deposit date:2021-12-21
Release date:2023-01-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the Ilheus virus helicase: implications for enzyme function and drug design
To Be Published
7WXI
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BU of 7wxi by Molmil
GPR domain of Drosophila P5CS filament with glutamate and ATPgammaS
Descriptor: Delta-1-pyrroline-5-carboxylate synthase, GAMMA-GLUTAMYL PHOSPHATE
Authors:Liu, J.L, Zhong, J, Guo, C.J, Zhou, X.
Deposit date:2022-02-14
Release date:2022-03-30
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural basis of dynamic P5CS filaments.
Elife, 11, 2022
7WXH
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BU of 7wxh by Molmil
GPR domain open form of Drosophila P5CS filament with glutamate, ATP, and NADPH
Descriptor: Delta-1-pyrroline-5-carboxylate synthase
Authors:Liu, J.L, Zhong, J, Guo, C.J, Zhou, X.
Deposit date:2022-02-14
Release date:2022-03-30
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural basis of dynamic P5CS filaments.
Elife, 11, 2022
7WX4
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BU of 7wx4 by Molmil
GK domain of Drosophila P5CS filament with glutamate and ATPgammaS
Descriptor: Delta-1-pyrroline-5-carboxylate synthase
Authors:Liu, J.L, Zhong, J, Guo, C.J, Zhou, X.
Deposit date:2022-02-14
Release date:2022-04-06
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of dynamic P5CS filaments.
Elife, 11, 2022
7WXG
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BU of 7wxg by Molmil
GPR domain closed form of Drosophila P5CS filament with glutamate, ATP, and NADPH
Descriptor: Delta-1-pyrroline-5-carboxylate synthase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Liu, J.L, Zhong, J, Guo, C.J, Zhou, X.
Deposit date:2022-02-14
Release date:2022-03-30
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural basis of dynamic P5CS filaments.
Elife, 11, 2022
7WXF
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BU of 7wxf by Molmil
GPR domain of Drosophila P5CS filament with glutamate
Descriptor: Delta-1-pyrroline-5-carboxylate synthase
Authors:Liu, J.L, Zhong, J, Guo, C.J, Zhou, X.
Deposit date:2022-02-14
Release date:2022-03-30
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of dynamic P5CS filaments.
Elife, 11, 2022
7WX3
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BU of 7wx3 by Molmil
GK domain of Drosophila P5CS filament with glutamate, ATP, and NADPH
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Delta-1-pyrroline-5-carboxylate synthase, GAMMA-GLUTAMYL PHOSPHATE, ...
Authors:Liu, J.L, Zhong, J, Guo, C.J, Zhou, X.
Deposit date:2022-02-14
Release date:2022-04-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of dynamic P5CS filaments.
Elife, 11, 2022
6LFG
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BU of 6lfg by Molmil
Cryo-EM structure of the Drosophila CTP synthase product-bound filament
Descriptor: CTP synthase
Authors:Ji-long, L, Xian, Z, Chen-Jun, G.
Deposit date:2019-12-02
Release date:2020-03-18
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (9.58 Å)
Cite:Drosophila CTP synthase can form distinct substrate- and product-bound filaments.
J Genet Genomics, 46, 2019
7C2Q
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BU of 7c2q by Molmil
The crystal structure of COVID-19 main protease in the apo state
Descriptor: 3C-like proteinase
Authors:Zhou, X.L, Zhong, F.L, Lin, C, Hu, X.H, Zhou, H, Wang, Q.S, Li, j, Zhang, J.
Deposit date:2020-05-08
Release date:2020-09-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure of SARS-CoV-2 main protease in the apo state.
Sci China Life Sci, 64, 2021
6D39
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BU of 6d39 by Molmil
Photodissociable dimeric Dronpa green fluorescent protein variant V (pdDronpaV)
Descriptor: Fluorescent protein Dronpa, SULFATE ION
Authors:Zhou, X, Fan, L, Lin, M.
Deposit date:2018-04-15
Release date:2018-05-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Optical control of cell signaling by single-chain photoswitchable kinases.
Science, 355, 2017
6D38
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BU of 6d38 by Molmil
Photodissociable dimeric Dronpa green fluorescent protein variant M (pdDronpaM)
Descriptor: Fluorescent protein Dronpa, SULFATE ION
Authors:Zhou, X, Fan, L, Lin, M.
Deposit date:2018-04-14
Release date:2018-05-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Optical control of cell signaling by single-chain photoswitchable kinases.
Science, 355, 2017
8K4F
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BU of 8k4f by Molmil
DHODH in complex with compound A0
Descriptor: 5-cyclopropyl-2-[1-[(2-fluorophenyl)methyl]pyrazolo[3,4-b]pyridin-3-yl]pyrimidin-4-amine, 6-[bis(oxidanyl)methyl]-5~{H}-pyrimidine-2,4-dione, ACETATE ION, ...
Authors:Jian, L, Sun, Q.
Deposit date:2023-07-18
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Discovery and Optimization of Novel h DHODH Inhibitors for the Treatment of Inflammatory Bowel Disease.
J.Med.Chem., 66, 2023
7MF1
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BU of 7mf1 by Molmil
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody 47D1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 47D1 Fab heavy chain, ...
Authors:Yuan, M, Zhu, X, Wilson, I.A.
Deposit date:2021-04-08
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.092 Å)
Cite:Diverse immunoglobulin gene usage and convergent epitope targeting in neutralizing antibody responses to SARS-CoV-2.
Cell Rep, 35, 2021
8SMK
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BU of 8smk by Molmil
hPAD4 bound to Activating Fab hA362
Descriptor: Activating Fab 362 heavy chain, Activating Fab 362 light chain, CALCIUM ION, ...
Authors:Maker, A, Verba, K.A.
Deposit date:2023-04-26
Release date:2024-03-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Antibody discovery identifies regulatory mechanisms of protein arginine deiminase 4.
Nat.Chem.Biol., 20, 2024
8SML
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BU of 8sml by Molmil
hPAD4 bound to inhibitory Fab hI365
Descriptor: CALCIUM ION, Fab hI365 heavy chain, Fab hI365 light chain, ...
Authors:Maker, A, Verba, K.A.
Deposit date:2023-04-26
Release date:2024-03-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Antibody discovery identifies regulatory mechanisms of protein arginine deiminase 4.
Nat.Chem.Biol., 20, 2024
8HCO
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BU of 8hco by Molmil
Substrate-engaged TOM complex from yeast
Descriptor: Mitochondrial import receptor subunit TOM22, Mitochondrial import receptor subunit TOM40, Mitochondrial import receptor subunit TOM5, ...
Authors:Zhou, X.Y, Yang, Y.Q, Wang, G.P, Wang, S.S.
Deposit date:2022-11-02
Release date:2023-09-13
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Molecular pathway of mitochondrial preprotein import through the TOM-TIM23 supercomplex.
Nat.Struct.Mol.Biol., 30, 2023
6L6Z
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BU of 6l6z by Molmil
Cryo-EM structure of the Drosophila CTP synthase substrate-bound filament
Descriptor: CTP synthase
Authors:Ji-Long, L, Xian, Z, Chen-Jun, G.
Deposit date:2019-10-30
Release date:2020-03-18
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (6.09 Å)
Cite:Drosophila CTP synthase can form distinct substrate- and product-bound filaments.
J Genet Genomics, 46, 2019
7WIZ
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BU of 7wiz by Molmil
Structural basis for ligand binding modes of CTP synthase
Descriptor: CTP synthase, GLUTAMINE, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Liu, J.L, Guo, C.J.
Deposit date:2022-01-05
Release date:2023-01-11
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis for ligand binding modes of CTP synthase.
Proc.Natl.Acad.Sci.USA, 118, 2021
7WJ4
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BU of 7wj4 by Molmil
Structural basis for ligand binding modes of CTP synthase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CTP synthase, GAMMA-L-GLUTAMIC ACID, ...
Authors:Liu, J.L, Guo, C.J.
Deposit date:2022-01-05
Release date:2023-01-11
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structural basis for ligand binding modes of CTP synthase.
Proc.Natl.Acad.Sci.USA, 118, 2021
5WTW
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BU of 5wtw by Molmil
Hepatitis B virus core protein Y132A mutant in P 41 21 2 Space Group
Descriptor: CHLORIDE ION, Core protein
Authors:Zhou, Z, Xu, Z.H.
Deposit date:2016-12-15
Release date:2017-02-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.623 Å)
Cite:Heteroaryldihydropyrimidine (HAP) and Sulfamoylbenzamide (SBA) Inhibit Hepatitis B Virus Replication by Different Molecular Mechanisms.
Sci Rep, 7, 2017
7YP1
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BU of 7yp1 by Molmil
Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 10E4 (localized refinement)
Descriptor: 10E4 heavy chain, 10E4 light chain, EBV gH, ...
Authors:Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N.
Deposit date:2022-08-02
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection.
Cell Rep Med, 4, 2023
7YOY
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BU of 7yoy by Molmil
Cryo-EM structure of EBV gHgL-gp42 in complex with mAbs 3E8 and 5E3 (localized refinement)
Descriptor: 3E8 heavy chain, 3E8 light chain, 5E3 heavy chain, ...
Authors:Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N.
Deposit date:2022-08-02
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection.
Cell Rep Med, 4, 2023

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PDB entries from 2024-07-17

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