Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
9BGM
DownloadVisualize
BU of 9bgm by Molmil
Pseudomonas phage DEV neck and tail (portal, head-to-tail and tail tube proteins)
Descriptor: gp75 tail tube, gp80 portal protein, gp83 head-to-tail
Authors:Iglesias, S.M, Hou, C.-F.D, Li, F, Cingolani, G.
Deposit date:2024-04-19
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor
To Be Published
3LJ5
DownloadVisualize
BU of 3lj5 by Molmil
Full Length Bacteriophage P22 Portal Protein
Descriptor: Portal protein
Authors:Olia, A.S, Cingolani, G.
Deposit date:2010-01-25
Release date:2011-04-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (7.497 Å)
Cite:Three-dimensional structure of a viral genome-delivery portal vertex.
Nat.Struct.Mol.Biol., 18, 2011
3LWW
DownloadVisualize
BU of 3lww by Molmil
Structure of an open and closed conformation of Human Importin Beta bound to the Snurportin1 IBB-domain trapped in the same crystallographic asymmetric unit
Descriptor: Importin subunit beta-1, Snurportin-1
Authors:Bhardwaj, A, Cingolani, G.
Deposit date:2010-02-24
Release date:2010-06-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Conformational selection in the recognition of the snurportin importin beta binding domain by importin beta.
Biochemistry, 49, 2010
1ADR
DownloadVisualize
BU of 1adr by Molmil
DETERMINATION OF THE NUCLEAR MAGNETIC RESONANCE STRUCTURE OF THE DNA-BINDING DOMAIN OF THE P22 C2 REPRESSOR (1-76) IN SOLUTION AND COMPARISON WITH THE DNA-BINDING DOMAIN OF THE 434 REPRESSOR
Descriptor: P22 C2 REPRESSOR
Authors:Sevillasierra, P, Otting, G, Wuthrich, K.
Deposit date:1993-07-19
Release date:1994-01-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Determination of the nuclear magnetic resonance structure of the DNA-binding domain of the P22 c2 repressor (1 to 76) in solution and comparison with the DNA-binding domain of the 434 repressor.
J.Mol.Biol., 235, 1994
1AOY
DownloadVisualize
BU of 1aoy by Molmil
N-TERMINAL DOMAIN OF ESCHERICHIA COLI ARGININE REPRESSOR NMR, 23 STRUCTURES
Descriptor: ARGININE REPRESSOR
Authors:Sunnerhagen, M, Nilges, M, Otting, G.
Deposit date:1997-07-14
Release date:1997-09-17
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Solution structure of the DNA-binding domain and model for the complex of multifunctional hexameric arginine repressor with DNA.
Nat.Struct.Biol., 4, 1997
4BFR
DownloadVisualize
BU of 4bfr by Molmil
Discovery and Optimization of Pyrimidone Indoline Amide PI3Kbeta Inhibitors for the Treatment of Phosphatase and TENsin homologue (PTEN)-Deficient Cancers
Descriptor: 2-[2-(2-METHYL-2,3-DIHYDRO-INDOL-1-YL)-2-OXO-ETHYL]-6-MORPHOLIN-4-YL-3H-PYRIMIDIN-4-ONE, PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE 3-KINASE CATALYTIC S SUBUNIT BETA ISOFORM
Authors:Certal, V, Carry, J.C, Halley, F, Virone-Oddos, A, Thompson, F, Filoche-Romme, B, El-Ahmad, Y, Karlsson, A, Charrier, V, Delorme, C, Rak, A, Abecassis, P.Y, Amara, C, Vincent, L, Bonnevaux, H, Nicolas, J.P, Mathieu, M, Bertrand, T, Marquette, J.P, Michot, N, Benard, T, Perrin, M.A, Perron, S, Monget, S, Gruss-Leleu, F, Doerflinger, G, Guizani, H, Brollo, M, Delbarre, L, Bertin, L, Richepin, P, Loyau, V, Garcia-Echeverria, C, Lengauer, C, Schio, L.
Deposit date:2013-03-22
Release date:2014-01-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery and Optimization of Pyrimidone Indoline Amide Pi3Kbeta Inhibitors for the Treatment of Phosphatase and Tensin Homologue (Pten)-Deficient Cancers.
J.Med.Chem., 57, 2014
1AXJ
DownloadVisualize
BU of 1axj by Molmil
FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F), NMR, 20 STRUCTURES
Descriptor: FLAVIN MONONUCLEOTIDE, FMN-BINDING PROTEIN
Authors:Liepinsh, E, Otting, G.
Deposit date:1997-10-16
Release date:1998-01-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Pathway of chymotrypsin evolution suggested by the structure of the FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Nat.Struct.Biol., 4, 1997
4DKW
DownloadVisualize
BU of 4dkw by Molmil
Structure of P22 Large terminase nuclease domain
Descriptor: Large terminase protein, MAGNESIUM ION, SULFATE ION
Authors:Roy, A, Cingolani, G.
Deposit date:2012-02-04
Release date:2012-06-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structure of p22 headful packaging nuclease.
J.Biol.Chem., 287, 2012
2YAK
DownloadVisualize
BU of 2yak by Molmil
Structure of death-associated protein Kinase 1 (dapk1) in complex with a ruthenium octasporine ligand (OSV)
Descriptor: DEATH-ASSOCIATED PROTEIN KINASE 1, RUTHENIUM OCTASPORINE 4
Authors:Feng, L, Geisselbrecht, Y, Blanck, S, Wilbuer, A, Atilla-Gokcumen, G.E, Filippakopoulos, P, Kraeling, K, Celik, M.A, Harms, K, Maksimoska, J, Marmorstein, R, Frenking, G, Knapp, S, Essen, L.-O, Meggers, E.
Deposit date:2011-02-23
Release date:2011-04-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structurally Sophisticated Octahedral Metal Complexes as Highly Selective Protein Kinase Inhibitors.
J.Am.Chem.Soc., 133, 2011
3MJO
DownloadVisualize
BU of 3mjo by Molmil
Small subunit (R2F) of native ribonucleotide reductase from Corynebacterium ammoniagenes
Descriptor: MANGANESE (III) ION, Ribonucleotide reductase subunit R2F
Authors:Ogata, H, Stolle, P, Stehr, M, Auling, G, Lubitz, W.
Deposit date:2010-04-13
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:A Tyrosyl-Dimanganese Coupled Spin System is the Native Metalloradical Cofactor of the R2F Subunit of the Ribonucleotide Reductase of Corynebacterium ammoniagenes.
J.Am.Chem.Soc., 132, 2010
3ZOB
DownloadVisualize
BU of 3zob by Molmil
Solution structure of chicken Engrailed 2 homeodomain
Descriptor: HOMEOBOX PROTEIN ENGRAILED-2
Authors:Carlier, L, Balayssac, S, Cantrelle, F.X, Khemtemourian, L, Chassaing, G, Joliot, A, Lequin, O.
Deposit date:2013-02-21
Release date:2013-08-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Investigation of Homeodomain Membrane Translocation Properties: Insights from the Structure Determination of Engrailed-2 Homeodomain in Aqueous and Membrane-Mimetic Environments.
Biophys.J., 105, 2013
3P9A
DownloadVisualize
BU of 3p9a by Molmil
An atomic view of the nonameric small terminase subunit of Bacteriophage P22
Descriptor: DNA-packaging protein gp3
Authors:Bhardwaj, A, Roy, A, Cingolani, G.
Deposit date:2010-10-17
Release date:2012-05-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.755 Å)
Cite:Small terminase couples viral DNA binding to genome-packaging ATPase activity.
Structure, 20, 2012
6E3B
DownloadVisualize
BU of 6e3b by Molmil
STRUCTURE OF Siw14 CATALYTIC CORE
Descriptor: SULFATE ION, Tyrosine-protein phosphatase SIW14
Authors:Florio, T, Lokareddy, R, Cingolani, G.
Deposit date:2018-07-13
Release date:2019-02-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Architecture of the Inositol Phosphatase Siw14.
Biochemistry, 58, 2019
6E4D
DownloadVisualize
BU of 6e4d by Molmil
Atomic structure of Mycobacterium tuberculosis DppA
Descriptor: Periplasmic dipeptide-binding lipoprotein DPPA, VAL-VAL-VAL-ALA
Authors:Ko, Y, Mitra, A, Niederweis, M, Cingolani, G.
Deposit date:2018-07-17
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.252 Å)
Cite:Heme and hemoglobin utilization by Mycobacterium tuberculosis.
Nat Commun, 10, 2019
8K62
DownloadVisualize
BU of 8k62 by Molmil
Crystal structure of ALKBH1 and 13h complex.
Descriptor: 1-[5-[[3-(trifluoromethyloxy)phenyl]methoxy]pyrimidin-2-yl]pyrazole-4-carboxylic acid, MANGANESE (II) ION, Nucleic acid dioxygenase ALKBH1
Authors:Liang, X, Yinping, G, Feng, L, Jiang, Z, Ke, X, Shengyong, Y.
Deposit date:2023-07-24
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:Crystal structure of ALKBH1 and 13h complex
To Be Published
4R30
DownloadVisualize
BU of 4r30 by Molmil
Structure of human laforin dual specificity phosphatase domain
Descriptor: BETA-MERCAPTOETHANOL, Laforin, SULFATE ION
Authors:Sankhala, R.S, Koksal, A.C, Cingolani, G.
Deposit date:2014-08-13
Release date:2014-12-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Dimeric quaternary structure of human laforin.
J.Biol.Chem., 290, 2015
4EI2
DownloadVisualize
BU of 4ei2 by Molmil
Crystal Structures of MthK RCK gating ring bound to Barium
Descriptor: BARIUM ION, Calcium-gated potassium channel mthK
Authors:Smith, F.J, Cingolani, G, Rothberg, B.S.
Deposit date:2012-04-04
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.108 Å)
Cite:Crystal Structure of a Ba(2+)-Bound Gating Ring Reveals Elementary Steps in RCK Domain Activation.
Structure, 20, 2012
4ZKP
DownloadVisualize
BU of 4zkp by Molmil
P22 Tail Needle Gp26 crystallized at pH 7.0
Descriptor: CALCIUM ION, CHLORIDE ION, Tail needle protein gp26
Authors:Sankhala, R.S, Cingolani, G.
Deposit date:2015-04-30
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Plasticity of the Protein Plug That Traps Newly Packaged Genomes in Podoviridae Virions.
J.Biol.Chem., 291, 2016
1UAP
DownloadVisualize
BU of 1uap by Molmil
NMR structure of the NTR domain from human PCOLCE1
Descriptor: Procollagen C-proteinase enhancer protein
Authors:Liepinsh, E, Banyai, L, Pintacuda, G, Trexler, M, Patthy, L, Otting, G.
Deposit date:2003-03-14
Release date:2003-07-15
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR Structure of the Netrin-like Domain (NTR) of Human Type I Procollagen C-Proteinase Enhancer Defines Structural Consensus of NTR Domains and Assesses Potential Proteinase Inhibitory Activity and Ligand Binding.
J.Biol.Chem., 278, 2003
4HRF
DownloadVisualize
BU of 4hrf by Molmil
Atomic structure of DUSP26
Descriptor: Dual specificity protein phosphatase 26
Authors:Lokareddy, R.K, Bhardwaj, A, Cingolani, G.
Deposit date:2012-10-27
Release date:2013-01-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Atomic structure of dual-specificity phosphatase 26, a novel p53 phosphatase.
Biochemistry, 52, 2013
5BU5
DownloadVisualize
BU of 5bu5 by Molmil
HK620 Tail Needle crystallized at pH 9 (crystal form I)
Descriptor: CALCIUM ION, CHLORIDE ION, DNA stabilization protein
Authors:Bhardwaj, A, Cingolani, G.
Deposit date:2015-06-03
Release date:2015-06-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Structural Plasticity of the Protein Plug That Traps Newly Packaged Genomes in Podoviridae Virions.
J.Biol.Chem., 291, 2016
5BVZ
DownloadVisualize
BU of 5bvz by Molmil
HK620 Tail Needle crystallized at pH 9 (Crystal form II)
Descriptor: CALCIUM ION, CHLORIDE ION, DNA stabilization protein
Authors:Bhardwaj, A, Cingolani, G.
Deposit date:2015-06-05
Release date:2015-06-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Plasticity of the Protein Plug That Traps Newly Packaged Genomes in Podoviridae Virions.
J.Biol.Chem., 291, 2016
4ZXQ
DownloadVisualize
BU of 4zxq by Molmil
P22 Tail Needle Gp26 1-140 crystallized at pH 3.9
Descriptor: CALCIUM ION, CHLORIDE ION, Tail needle protein gp26
Authors:Sankhala, R.S, Cingolani, G.
Deposit date:2015-05-20
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural Plasticity of the Protein Plug That Traps Newly Packaged Genomes in Podoviridae Virions.
J.Biol.Chem., 291, 2016
1T3W
DownloadVisualize
BU of 1t3w by Molmil
Crystal Structure of the E.coli DnaG C-terminal domain (residues 434 to 581)
Descriptor: ACETIC ACID, DNA primase
Authors:Oakley, A.J, Loscha, K.V, Schaeffer, P.M, Liepinsh, E, Wilce, M.C.J, Otting, G, Dixon, N.E.
Deposit date:2004-04-28
Release date:2004-11-02
Last modified:2016-09-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal and solution structures of the helicase-binding domain of Escherichia coli primase
J.Biol.Chem., 280, 2005
5BU8
DownloadVisualize
BU of 5bu8 by Molmil
HK620 Tail Needle crystallized at pH 7.5 and derivatized with Xenon
Descriptor: CALCIUM ION, DNA stabilization protein, XENON
Authors:Sankhala, R.S, Cingolani, G.
Deposit date:2015-06-03
Release date:2015-11-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Structural Plasticity of the Protein Plug That Traps Newly Packaged Genomes in Podoviridae Virions.
J.Biol.Chem., 291, 2016

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon