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5A68
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BU of 5a68 by Molmil
Crystal structure of the AtTTM3 product complex with two orthophosphates and manganese ions (form B)
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, TRIPHOSPHATE TUNEL METALLOENZYME 3
Authors:Martinez, J, Truffault, V, Hothorn, M.
Deposit date:2015-06-24
Release date:2015-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
5A64
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BU of 5a64 by Molmil
Crystal structure of mouse thiamine triphosphatase in complex with thiamine triphosphate.
Descriptor: 1,2-ETHANEDIOL, THIAMINE TRIPHOSPHATASE, TRIETHYLENE GLYCOL, ...
Authors:Martinez, J, Truffault, V, Hothorn, M.
Deposit date:2015-06-24
Release date:2015-08-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
5A60
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BU of 5a60 by Molmil
Crystal structure of full-length E. coli ygiF in complex with tripolyphosphate and two magnesium ions
Descriptor: 1,2-ETHANEDIOL, INORGANIC TRIPHOSPHATASE, MAGNESIUM ION, ...
Authors:Martinez, J, Truffault, V, Hothorn, M.
Deposit date:2015-06-23
Release date:2015-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
4LSX
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BU of 4lsx by Molmil
Plant steroid receptor ectodomain bound to brassinolide and SERK1 co-receptor ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Brassinolide, ...
Authors:Santiago, J, Henzler, C, Hothorn, M.
Deposit date:2013-07-23
Release date:2013-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.302 Å)
Cite:Molecular mechanism for plant steroid receptor activation by somatic embryogenesis co-receptor kinases.
Science, 341, 2013
5A66
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BU of 5a66 by Molmil
Crystal structure of AtTTM3 in complex with tripolyphosphate and manganese ion (form A)
Descriptor: 1,2-ETHANEDIOL, MANGANESE (II) ION, TRIPHOSPHATE, ...
Authors:Martinez, J, Truffault, V, Hothorn, M.
Deposit date:2015-06-24
Release date:2015-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
4LSC
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BU of 4lsc by Molmil
Isolated SERK1 co-receptor ectodomain at high resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Somatic embryogenesis receptor kinase 1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Santiago, J, Henzler, C, Hothorn, M.
Deposit date:2013-07-22
Release date:2013-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.529 Å)
Cite:Molecular mechanism for plant steroid receptor activation by somatic embryogenesis co-receptor kinases.
Science, 341, 2013
3GYM
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BU of 3gym by Molmil
Structure of Prostasin in Complex with Aprotinin
Descriptor: Pancreatic trypsin inhibitor, Prostasin
Authors:Spraggon, G, Hornsby, M, Shipway, A, Harris, J.L, Lesley, S.A.
Deposit date:2009-04-03
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Active site conformational changes of prostasin provide a new mechanism of protease regulation by divalent cations.
Protein Sci., 18, 2009
5A61
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BU of 5a61 by Molmil
Crystal structure of full-length E. coli ygiF in complex with tripolyphosphate and two manganese ions.
Descriptor: 1,2-ETHANEDIOL, INORGANIC TRIPHOSPHATASE, MANGANESE (II) ION, ...
Authors:Martinez, J, Truffault, V, Hothorn, M.
Deposit date:2015-06-23
Release date:2015-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
5A5Y
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BU of 5a5y by Molmil
Crystal structure of AtTTM3 in complex with tripolyphosphate and magnesium ion (form A)
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, TRIPHOSPHATE, ...
Authors:Martinez, J, Truffault, V, Hothorn, M.
Deposit date:2015-06-23
Release date:2015-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
2XNR
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BU of 2xnr by Molmil
Structural insights into cis element recognition of non- polyadenylated RNAs by the Nab3-RRM
Descriptor: 5'-R(*UP*UP*CP*UP*UP*AP*UP*UP*CP*UP*UP*A)-3', ACETATE ION, NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN 3
Authors:Lunde, B.M, Horner, M, Meinhart, A.
Deposit date:2010-08-05
Release date:2010-09-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Insights Into Cis Element Recognition of Non-Polyadenylated Rnas by the Nab3-Rrm.
Nucleic Acids Res., 39, 2011
2XNQ
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BU of 2xnq by Molmil
Structural insights into cis element recognition of non- polyadenylated RNAs by the Nab3-RRM
Descriptor: ACETATE ION, NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN 3
Authors:Lunde, B.M, Horner, M, Meinhart, A.
Deposit date:2010-08-05
Release date:2010-09-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Insights Into Cis Element Recognition of Non-Polyadenylated Rnas by the Nab3-Rrm.
Nucleic Acids Res., 39, 2011
1ZR3
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BU of 1zr3 by Molmil
Crystal structure of the macro-domain of human core histone variant macroH2A1.1 (form B)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, histone macroH2A1.1
Authors:Kustatscher, G, Hothorn, M, Pugieux, C, Scheffzek, K, Ladurner, A.G.
Deposit date:2005-05-19
Release date:2006-02-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Splicing regulates NAD metabolite binding to histone macroH2A.
Nat.Struct.Mol.Biol., 12, 2005
1ZR5
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BU of 1zr5 by Molmil
Crystal structure of the macro-domain of human core histone variant macroH2A1.2
Descriptor: H2AFY protein
Authors:Kustatscher, G, Hothorn, M, Pugieux, C, Scheffzek, K, Ladurner, A.G.
Deposit date:2005-05-19
Release date:2005-06-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Splicing regulates NAD metabolite binding to histone macroH2A.
Nat.Struct.Mol.Biol., 12, 2005
2FXK
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BU of 2fxk by Molmil
Crystal structure of the macro-domain of human core histone variant macroH2A1.1 (form A)
Descriptor: H2A histone family, member Y isoform 1
Authors:Kustatscher, G, Hothorn, M, Pugieux, C, Scheffzek, K, Ladurner, A.G.
Deposit date:2006-02-06
Release date:2006-02-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Splicing regulates NAD metabolite binding to histone macroH2A.
Nat.Struct.Mol.Biol., 12, 2005
2H7J
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BU of 2h7j by Molmil
Crystal Structure of Cathepsin S in complex with a Nonpeptidic Inhibitor.
Descriptor: 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL, Cathepsin S, N-[(1S)-1-{1-[(1R,3E)-1-ACETYLPENT-3-EN-1-YL]-1H-1,2,3-TRIAZOL-4-YL}-1,2-DIMETHYLPROPYL]BENZAMIDE
Authors:Patterson, A.W, Wood, W.J, Hornsby, M, Lesley, S, Spraggon, G, Ellman, J.A.
Deposit date:2006-06-02
Release date:2006-10-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Identification of selective, nonpeptidic nitrile inhibitors of cathepsin s using the substrate activity screening method.
J.Med.Chem., 49, 2006
2HH5
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BU of 2hh5 by Molmil
Crystal Structure of Cathepsin S in complex with a Zinc mediated non-covalent arylaminoethyl amide
Descriptor: CHLORIDE ION, Cathepsin S, N-[(1R)-1-[(BENZYLSULFONYL)METHYL]-2-{[(1S)-1-METHYL-2-{[4-(TRIFLUOROMETHOXY)PHENYL]AMINO}ETHYL]AMINO}-2-OXOETHYL]MORPHOLINE-4-CARBOXAMIDE, ...
Authors:Spraggon, G, Hornsby, M, Lesley, S.A, Tully, D.C, Harris, J.L, Karenewsky, D.S.
Deposit date:2006-06-27
Release date:2006-08-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Synthesis and SAR of arylaminoethyl amides as noncovalent inhibitors of cathepsin S: P3 cyclic ethers.
Bioorg.Med.Chem.Lett., 16, 2006
2HHN
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BU of 2hhn by Molmil
Cathepsin S in complex with non covalent arylaminoethyl amide.
Descriptor: Cathepsin S, N-[(1R)-1-[(BENZYLSULFONYL)METHYL]-2-{[(1S)-1-METHYL-2-{[4-(TRIFLUOROMETHOXY)PHENYL]AMINO}ETHYL]AMINO}-2-OXOETHYL]MORPHOLINE-4-CARBOXAMIDE, SULFATE ION
Authors:Spraggon, G, Hornsby, M, Lesley, S.A, Tully, D.C, Harris, J.L, Karenewsky, D.S, Kulathila, R, Clark, K.
Deposit date:2006-06-28
Release date:2007-05-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Synthesis and SAR of arylaminoethyl amides as noncovalent inhibitors of cathepsin S: P3 cyclic ethers
Bioorg.Med.Chem.Lett., 16, 2006
2HXZ
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BU of 2hxz by Molmil
Crystal Structure of Cathepsin S in complex with a Nonpeptidic Inhibitor (Hexagonal spacegroup)
Descriptor: Cathepsin S, N-[(1S)-1-{1-[(1R,3E)-1-ACETYLPENT-3-EN-1-YL]-1H-1,2,3-TRIAZOL-4-YL}-1,2-DIMETHYLPROPYL]BENZAMIDE, SULFATE ION
Authors:Patterson, A.W, Wood, W.J, Hornsby, M, Lesley, S, Spraggon, G, Ellman, J.A.
Deposit date:2006-08-04
Release date:2006-10-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Identification of selective, nonpeptidic nitrile inhibitors of cathepsin s using the substrate activity screening method.
J.Med.Chem., 49, 2006
6YI7
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BU of 6yi7 by Molmil
Structure of cathepsin B1 from Schistosoma mansoni (SmCB1) in complex with an azanitrile inhibitor
Descriptor: 1-[(2~{S})-1-[[iminomethyl(methyl)amino]-methyl-amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-3-(phenylmethyl)urea, ACETATE ION, Cathepsin B-like peptidase (C01 family)
Authors:Jilkova, A, Rezacova, P, Pachl, P, Fanfrlik, J, Rubesova, P, Guetschow, M, Mares, M.
Deposit date:2020-04-01
Release date:2020-12-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Azanitrile Inhibitors of the SmCB1 Protease Target Are Lethal to Schistosoma mansoni : Structural and Mechanistic Insights into Chemotype Reactivity.
Acs Infect Dis., 7, 2021
5V8O
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BU of 5v8o by Molmil
Discovery of a high affinity inhibitor of cGAS
Descriptor: 5-phenyltetrazolo[1,5-a]pyrimidin-7-ol, Cyclic GMP-AMP synthase, ZINC ION
Authors:Hall, J.
Deposit date:2017-03-22
Release date:2017-09-27
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Discovery of PF-06928215 as a high affinity inhibitor of cGAS enabled by a novel fluorescence polarization assay.
PLoS ONE, 12, 2017
7NUU
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BU of 7nuu by Molmil
Crystal structure of human AMDHD2 in complex with Zn
Descriptor: GLYCEROL, N-acetylglucosamine-6-phosphate deacetylase, ZINC ION
Authors:Ruegenberg, S, Kroef, V, Baumann, U, Denzel, M.S.
Deposit date:2021-03-14
Release date:2021-04-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.836 Å)
Cite:GFPT2/GFAT2 and AMDHD2 act in tandem to control the hexosamine pathway.
Elife, 11, 2022
7NUT
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BU of 7nut by Molmil
Crystal structure of human AMDHD2 in complex with Zn and GlcN6P
Descriptor: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, N-acetylglucosamine-6-phosphate deacetylase, ZINC ION
Authors:Ruegenberg, S, Kroef, V, Baumann, U, Denzel, M.S.
Deposit date:2021-03-14
Release date:2021-04-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:GFPT2/GFAT2 and AMDHD2 act in tandem to control the hexosamine pathway.
Elife, 11, 2022
8R6T
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BU of 8r6t by Molmil
NMR solution structure of thyropin IrThy-Cd from the hard tick Ixodes ricinus
Descriptor: Putative two thyropin protein (Fragment)
Authors:Srb, P, Veverka, V, Matouskova, Z, Orsaghova, K, Mares, M.
Deposit date:2023-11-23
Release date:2024-02-28
Last modified:2024-03-06
Method:SOLUTION NMR
Cite:An Unusual Two-Domain Thyropin from Tick Saliva: NMR Solution Structure and Highly Selective Inhibition of Cysteine Cathepsins Modulated by Glycosaminoglycans.
Int J Mol Sci, 25, 2024
7QBN
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BU of 7qbn by Molmil
Structure of cathepsin K in complex with the azadipeptide nitrile inhibitor Gu1303
Descriptor: (phenylmethyl) ~{N}-[(2~{S})-1-[[aminomethyl(methyl)amino]-methyl-amino]-1-oxidanylidene-3-phenyl-propan-2-yl]carbamate, ACETATE ION, CHLORIDE ION, ...
Authors:Benysek, J, Busa, M, Mares, M.
Deposit date:2021-11-19
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Highly potent inhibitors of cathepsin K with a differently positioned cyanohydrazide warhead: structural analysis of binding mode to mature and zymogen-like enzymes.
J Enzyme Inhib Med Chem, 37, 2022
6NAO
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BU of 6nao by Molmil
Discovery of a high affinity inhibitor of cGAS
Descriptor: (1R,2S)-2-[(7-hydroxy-5-phenylpyrazolo[1,5-a]pyrimidine-3-carbonyl)amino]cyclohexane-1-carboxylic acid, CYCLIC GMP-AMP SYNTHASE, ZINC ION
Authors:Hall, J.
Deposit date:2018-12-06
Release date:2018-12-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.23 Å)
Cite:Discovery of PF-06928215 as a high affinity inhibitor of cGAS enabled by a novel fluorescence polarization assay.
PLoS ONE, 12, 2017

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