Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8QRJ
DownloadVisualize
BU of 8qrj by Molmil
LCC-ICCG PETase mutant H218Y
Descriptor: 1,2-ETHANEDIOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CALCIUM ION, ...
Authors:Orr, G, Niv, Y, Barakat, M, Boginya, A, Dessau, M, Afriat-Jurnou, L.
Deposit date:2023-10-09
Release date:2024-09-18
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Streamlined screening of extracellularly expressed PETase libraries for improved polyethylene terephthalate degradation.
Biotechnol J, 19, 2024
3CL8
DownloadVisualize
BU of 3cl8 by Molmil
Crystal structure of Puue Allantoinase complexed with ACA
Descriptor: 5-amino-1H-imidazole-4-carboxamide, Puue Allantoinase
Authors:Ramazzina, I, Cendron, L, Folli, C, Berni, R, Monteverdi, D, Zanotti, G, Percudani, R.
Deposit date:2008-03-18
Release date:2008-06-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Logical identification of an allantoinase analog (puuE) recruited from polysaccharide deacetylases
J.Biol.Chem., 283, 2008
3CKX
DownloadVisualize
BU of 3ckx by Molmil
Crystal structure of sterile 20-like kinase 3 (MST3, STK24) in complex with staurosporine
Descriptor: STAUROSPORINE, Serine/threonine-protein kinase 24
Authors:Antonysamy, S.S, Burley, S.K, Buchanan, S, Chau, F, Feil, I, Wu, L, Sauder, J.M, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-03-17
Release date:2008-04-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of sterile 20-like kinase 3 (MST3, STK24) in complex with staurosporine.
To be Published
3CL7
DownloadVisualize
BU of 3cl7 by Molmil
Crystal structure of Puue Allantoinase in complex with Hydantoin
Descriptor: Puue Allantoinase, imidazolidine-2,4-dione
Authors:Ramazzina, I, Cendron, L, Folli, C, Berni, R, Monteverdi, D, Zanotti, G, Percudani, R.
Deposit date:2008-03-18
Release date:2008-06-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Logical identification of an allantoinase analog (puuE) recruited from polysaccharide deacetylases
J.Biol.Chem., 283, 2008
3P9O
DownloadVisualize
BU of 3p9o by Molmil
Aerobic ternary complex of urate oxidase with azide and chloride
Descriptor: AZIDE ION, CHLORIDE ION, SODIUM ION, ...
Authors:Gabison, L, Colloc'H, N, El Hajji, M, Castro, B, Chiadmi, M, Prange, T.
Deposit date:2010-10-18
Release date:2011-08-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Azide and Cyanide Show Different Inhibition Modes to Urate Oxidase
To be Published
3CNC
DownloadVisualize
BU of 3cnc by Molmil
Crystal Structure of Ad16 fiber knob
Descriptor: Fiber protein
Authors:Pache, L, Venkataraman, S, Nemerow, G.R, Reddy, V.S.
Deposit date:2008-03-25
Release date:2008-06-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural variations in species B adenovirus fibers impact CD46 association
J.Virol., 82, 2008
8SJ3
DownloadVisualize
BU of 8sj3 by Molmil
Beta-lactamase CTX-M-14 E166Y/N170G
Descriptor: Beta-lactamase CTX-M-14
Authors:Judge, A, Palzkill, T, Sankaran, B, Prasad, B.V.V, Hu, L.
Deposit date:2023-04-17
Release date:2024-02-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Network of epistatic interactions in an enzyme active site revealed by large-scale deep mutational scanning.
Proc.Natl.Acad.Sci.USA, 121, 2024
6H0Q
DownloadVisualize
BU of 6h0q by Molmil
B1-type ACP domain from module 7 of MLSB
Descriptor: Type I modular polyketide synthase
Authors:Moretto, L, Heylen, R, Holroyd, N, Vance, S, Broadhurst, R.W.
Deposit date:2018-07-10
Release date:2019-03-06
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Modular type I polyketide synthase acyl carrier protein domains share a common N-terminally extended fold.
Sci Rep, 9, 2019
8SHH
DownloadVisualize
BU of 8shh by Molmil
Crystal structure of EvdS6 decarboxylase in ligand free state
Descriptor: DI(HYDROXYETHYL)ETHER, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, dTDP-glucose 4,6-dehydratase
Authors:Sharma, P, Frigo, L, Dulin, C.C, Bachmann, B.O, Iverson, T.M.
Deposit date:2023-04-14
Release date:2023-08-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:EvdS6 is a bifunctional decarboxylase from the everninomicin gene cluster.
J.Biol.Chem., 299, 2023
8SK0
DownloadVisualize
BU of 8sk0 by Molmil
Crystal structure of EvdS6 decarboxylase in ligand bound state
Descriptor: CITRATE ANION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Sharma, P, Frigo, L, Dulin, C.C, Bachmann, B.O, Iverson, T.M.
Deposit date:2023-04-18
Release date:2023-08-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:EvdS6 is a bifunctional decarboxylase from the everninomicin gene cluster.
J.Biol.Chem., 299, 2023
3CQ0
DownloadVisualize
BU of 3cq0 by Molmil
Crystal Structure of TAL2_YEAST
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Putative transaldolase YGR043C, ...
Authors:Huang, H, Niu, L, Teng, M.
Deposit date:2008-04-01
Release date:2009-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure and identification of NQM1/YGR043C, a transaldolase from Saccharomyces cerevisiae
Proteins, 73, 2008
6H0J
DownloadVisualize
BU of 6h0j by Molmil
A1-type ACP domain from module 5 of MLSA1
Descriptor: Type I modular polyketide synthase
Authors:Moretto, L, Heylen, R, Holroyd, N, Vance, S, Broadhurst, R.W.
Deposit date:2018-07-09
Release date:2019-03-06
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Modular type I polyketide synthase acyl carrier protein domains share a common N-terminally extended fold.
Sci Rep, 9, 2019
6HB8
DownloadVisualize
BU of 6hb8 by Molmil
Crystal structure of OXA-517 beta-lactamase
Descriptor: 1,2-ETHANEDIOL, 2-ETHOXYETHANOL, Beta-lactamase, ...
Authors:Raczynska, J.E, Dabos, L, Zavala, A, Retailleau, P, Iorga, B, Jaskolski, M, Naas, T.
Deposit date:2018-08-09
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Genetic, biochemical and structural characterization of OXA-517, an OXA-48-like extended-spectrum cephalosporins and carbapenems-hydrolyzing beta-lactamase
To Be Published
3CYZ
DownloadVisualize
BU of 3cyz by Molmil
Dimeric crystal structure of a pheromone binding protein from Apis mellifera in complex with 9-keto-2(E)-decenoic acid at pH 7.0
Descriptor: (2Z)-9-oxodec-2-enoic acid, CHLORIDE ION, GLYCEROL, ...
Authors:Pesenti, M.E, Spinelli, S, Bezirard, V, Briand, L, Pernollet, J.C, Tegoni, M, Cambillau, C.
Deposit date:2008-04-27
Release date:2009-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Queen bee pheromone binding protein pH-induced domain swapping favors pheromone release
J.Mol.Biol., 390, 2009
6H8O
DownloadVisualize
BU of 6h8o by Molmil
Crystal structure of the Master-Rep protein nuclease domain from the Faba Bean Necrotic Yellows Virus
Descriptor: Replication-associated protein, SULFATE ION
Authors:Moncalian, G, Gonzalez-Montes, L.
Deposit date:2018-08-02
Release date:2018-08-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of the Master-Rep protein nuclease domain from the Faba Bean Necrotic Yellows Virus
To Be Published
3CZO
DownloadVisualize
BU of 3czo by Molmil
Crystal Structure of Double Mutant Phenylalanine Ammonia-Lyase From Anabaena Variabilis
Descriptor: Histidine ammonia-lyase
Authors:Stevens, R.C, Wang, L.
Deposit date:2008-04-29
Release date:2008-05-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and biochemical characterization of the therapeutic Anabaena variabilis phenylalanine ammonia lyase.
J.Mol.Biol., 380, 2008
8SFY
DownloadVisualize
BU of 8sfy by Molmil
Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with UDP-glucose
Descriptor: UDP-glycosyltransferase 202A2, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Arriaza, R.H, Daneshian, L, Dermauw, W, Wybouw, N, Van Leeuwen, T, Chruszcz, M.
Deposit date:2023-04-11
Release date:2023-09-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with UDP-glucose
To Be Published
8SK5
DownloadVisualize
BU of 8sk5 by Molmil
Crystal structure of the SARS-CoV-2 neutralizing VHH 7A9 bound to the spike receptor binding domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, anti-SARS-CoV-2 receptor binding domain VHH
Authors:Noland, C.L, Pande, K, Zhang, L, Zhou, H, Galli, J, Eddins, M, Gomez-Llorente, Y.
Deposit date:2023-04-18
Release date:2023-08-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.011 Å)
Cite:Discovery and multimerization of cross-reactive single-domain antibodies against SARS-like viruses to enhance potency and address emerging SARS-CoV-2 variants.
Sci Rep, 13, 2023
6HHX
DownloadVisualize
BU of 6hhx by Molmil
Structure of T. thermophilus AspRS in Complex with 5'-O-(N-(L-aspartyl)-sulfamoyl)cytidine
Descriptor: 5'-O-(N-(L-aspartyl)-sulfamoyl)cytidine, Aspartate--tRNA(Asp) ligase
Authors:De Graef, S, Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2018-08-29
Release date:2019-12-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Insights into the Binding of Natural Pyrimidine-Based Inhibitors of Class II Aminoacyl-tRNA Synthetases.
Acs Chem.Biol., 15, 2020
6HEP
DownloadVisualize
BU of 6hep by Molmil
Crystal structure of human 14-3-3 beta in complex with CFTR R-domain peptide pS753-pS768
Descriptor: 14-3-3 protein beta/alpha, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Cystic fibrosis transmembrane conductance regulator
Authors:Stevers, L.M, Ottmann, C, Brunsveld, L.
Deposit date:2018-08-20
Release date:2018-10-24
Last modified:2018-11-07
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:A Thermodynamic Model for Multivalency in 14-3-3 Protein-Protein Interactions.
J. Am. Chem. Soc., 140, 2018
8SEB
DownloadVisualize
BU of 8seb by Molmil
Cryo-EM structure of a single loaded human UBA7-UBE2L6-ISG15 adenylate complex
Descriptor: ADENOSINE MONOPHOSPHATE, Ubiquitin-like modifier-activating enzyme 7, Ubiquitin-like protein ISG15, ...
Authors:Afsar, M, Jia, L, Ruben, E.A, Olsen, S.K.
Deposit date:2023-04-08
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Cryo-EM structures of Uba7 reveal the molecular basis for ISG15 activation and E1-E2 thioester transfer.
Nat Commun, 14, 2023
3CYG
DownloadVisualize
BU of 3cyg by Molmil
Crystal structure of an uncharacterized protein from Fervidobacterium nodosum Rt17-B1
Descriptor: Uncharacterized protein
Authors:Damodharan, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-04-25
Release date:2008-05-13
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal structure of an uncharacterized protein from Fervidobacterium nodosum Rt17-B1.
To be Published
3CYY
DownloadVisualize
BU of 3cyy by Molmil
The crystal structure of ZO-1 PDZ2 in complex with the Cx43 peptide
Descriptor: Tight junction protein ZO-1, peptide from Gap junction alpha-1 protein
Authors:Pan, L, Zhang, M.
Deposit date:2008-04-27
Release date:2008-09-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Domain-swapped dimerization of ZO-1 PDZ2 generates specific and regulatory connexin43-binding sites
Embo J., 27, 2008
6HKO
DownloadVisualize
BU of 6hko by Molmil
Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP
Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
Authors:Tafur, L, Sadian, Y, Weis, F, Muller, C.W.
Deposit date:2018-09-07
Release date:2019-04-03
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:The cryo-EM structure of a 12-subunit variant of RNA polymerase I reveals dissociation of the A49-A34.5 heterodimer and rearrangement of subunit A12.2.
Elife, 8, 2019
8SEA
DownloadVisualize
BU of 8sea by Molmil
Cryo-EM structure of a double loaded human UBA7-UBE2L6-ISG15 thioester mimetic complex (Form 1)
Descriptor: ADENOSINE MONOPHOSPHATE, Ubiquitin-like modifier-activating enzyme 7, Ubiquitin-like protein ISG15, ...
Authors:Afsar, M, Jia, L, Ruben, E.A, Olsen, S.K.
Deposit date:2023-04-08
Release date:2023-10-11
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of Uba7 reveal the molecular basis for ISG15 activation and E1-E2 thioester transfer.
Nat Commun, 14, 2023

225681

PDB entries from 2024-10-02

PDB statisticsPDBj update infoContact PDBjnumon