Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6DVV
DownloadVisualize
BU of 6dvv by Molmil
2.25 Angstrom Resolution Crystal Structure of 6-phospho-alpha-glucosidase from Klebsiella pneumoniae in Complex with NAD and Mn2+.
Descriptor: 6-phospho-alpha-glucosidase, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Endres, M, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-06-25
Release date:2018-07-18
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
6DUX
DownloadVisualize
BU of 6dux by Molmil
2.25 Angstrom Resolution Crystal Structure of 6-phospho-alpha-glucosidase from Klebsiella pneumoniae in Complex with NAD.
Descriptor: (2S)-2-hydroxybutanedioic acid, 6-phospho-alpha-glucosidase, ACETATE ION, ...
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Endres, M, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-06-22
Release date:2018-07-04
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
7KD1
DownloadVisualize
BU of 7kd1 by Molmil
Apo structure of the THF riboswitch aptamer domain
Descriptor: MAGNESIUM ION, SULFATE ION, tetrahydrofolate riboswitch aptamer domain
Authors:Wilt, H.M, Stagno, J.R, Wang, Y.-X.
Deposit date:2020-10-07
Release date:2021-03-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tying the knot in the tetrahydrofolate (THF) riboswitch: A molecular basis for gene regulation.
J.Struct.Biol., 213, 2021
4EJ7
DownloadVisualize
BU of 4ej7 by Molmil
Crystal structure of the aminoglycoside phosphotransferase APH(3')-Ia, ATP-bound
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Aminoglycoside 3'-phosphotransferase AphA1-IAB, CALCIUM ION, ...
Authors:Stogios, P.J, Minasov, G, Tan, K, Evdokimova, E, Egorova, O, Di Leo, R, Shakya, T, Wright, G.D, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-04-06
Release date:2012-04-18
Last modified:2013-09-04
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structure-guided optimization of protein kinase inhibitors reverses aminoglycoside antibiotic resistance.
Biochem.J., 454, 2013
3VZR
DownloadVisualize
BU of 3vzr by Molmil
Crystal structure of T173S mutant of PhaB from Ralstonia eutropha
Descriptor: Acetoacetyl-CoA reductase
Authors:Ikeda, K, Tanaka, Y, Tanaka, I, Yao, M.
Deposit date:2012-10-15
Release date:2013-08-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Directed evolution and structural analysis of NADPH-dependent Acetoacetyl Coenzyme A (Acetoacetyl-CoA) reductase from Ralstonia eutropha reveals two mutations responsible for enhanced kinetics
Appl.Environ.Microbiol., 79, 2013
4FC9
DownloadVisualize
BU of 4fc9 by Molmil
Structure of the C-terminal domain of the type III effector Xcv3220 (XopL)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, uncharacterized protein
Authors:Singer, A.U, Xu, X, Cui, H, Tan, K, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-05-24
Release date:2012-06-13
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the C-terminal domain of the type III effector Xcv3220 (XopL)
To be Published
3VZQ
DownloadVisualize
BU of 3vzq by Molmil
Crystal structure of Q47L mutant of PhaB from Ralstonia eutropha
Descriptor: Acetoacetyl-CoA reductase
Authors:Ikeda, K, Tanaka, Y, Tanaka, I, Yao, M.
Deposit date:2012-10-15
Release date:2013-08-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Directed evolution and structural analysis of NADPH-dependent Acetoacetyl Coenzyme A (Acetoacetyl-CoA) reductase from Ralstonia eutropha reveals two mutations responsible for enhanced kinetics
Appl.Environ.Microbiol., 79, 2013
3VZP
DownloadVisualize
BU of 3vzp by Molmil
Crystal structure of PhaB from Ralstonia eutropha
Descriptor: 1,4-DIETHYLENE DIOXIDE, Acetoacetyl-CoA reductase, GLYCEROL, ...
Authors:Ikeda, K, Tanaka, Y, Tanaka, I, Yao, M.
Deposit date:2012-10-15
Release date:2013-08-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:Directed evolution and structural analysis of NADPH-dependent Acetoacetyl Coenzyme A (Acetoacetyl-CoA) reductase from Ralstonia eutropha reveals two mutations responsible for enhanced kinetics
Appl.Environ.Microbiol., 79, 2013
3VZS
DownloadVisualize
BU of 3vzs by Molmil
Crystal structure of PhaB from Ralstonia eutropha in complex with Acetoacetyl-CoA and NADP
Descriptor: ACETOACETYL-COENZYME A, Acetoacetyl-CoA reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Ikeda, K, Tanaka, Y, Tanaka, I, Yao, M.
Deposit date:2012-10-15
Release date:2013-08-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Directed evolution and structural analysis of NADPH-dependent Acetoacetyl Coenzyme A (Acetoacetyl-CoA) reductase from Ralstonia eutropha reveals two mutations responsible for enhanced kinetics
Appl.Environ.Microbiol., 79, 2013
4OO2
DownloadVisualize
BU of 4oo2 by Molmil
Streptomyces globisporus C-1027 FAD dependent (S)-3-chloro-β-tyrosine-S-SgcC2 C-5 hydroxylase SgcC apo form
Descriptor: CALCIUM ION, Chlorophenol-4-monooxygenase, GLYCEROL
Authors:Cao, H, Xu, W, Bingman, C.A, Lohman, J.R, Yennamalli, R, Shen, B, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-01-29
Release date:2014-02-12
Last modified:2023-03-22
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Crystal Structures of SgcE6 and SgcC, the Two-Component Monooxygenase That Catalyzes Hydroxylation of a Carrier Protein-Tethered Substrate during the Biosynthesis of the Enediyne Antitumor Antibiotic C-1027 in Streptomyces globisporus.
Biochemistry, 55, 2016
8JT1
DownloadVisualize
BU of 8jt1 by Molmil
COLLAGENASE FROM GRIMONTIA (VIBRIO) HOLLISAE 1706B COMPLEXED WITH GLY-PRO-HYP-GLY-PRO-HYP
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-mer peptide, ...
Authors:Ueshima, S, Yaskawa, K, Takita, T, Mikami, B.
Deposit date:2023-06-21
Release date:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into the catalytic mechanism of Grimontia hollisae collagenase through structural and mutational analyses.
Febs Lett., 597, 2023
7AKW
DownloadVisualize
BU of 7akw by Molmil
Crystal structure of the viral rhodopsins chimera O1O2
Descriptor: EICOSANE, RETINAL, chimera of viral rhodopsins OLPVR1 and OLPVRII
Authors:Kovalev, K, Zabelskii, D, Alekseev, A, Astashkin, R, Gordeliy, V.
Deposit date:2020-10-02
Release date:2020-11-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Viral rhodopsins 1 are an unique family of light-gated cation channels.
Nat Commun, 11, 2020
7AKY
DownloadVisualize
BU of 7aky by Molmil
Crystal structure of the viral rhodopsin OLPVR1 in P21212 space group
Descriptor: (2S)-2,3-dihydroxypropyl (9Z)-hexadec-9-enoate, EICOSANE, viral rhodopsin OLPVR1
Authors:Kovalev, K, Zabelskii, D, Alekseev, A, Astashkin, R, Gordeliy, V.
Deposit date:2020-10-02
Release date:2020-11-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Viral rhodopsins 1 are an unique family of light-gated cation channels.
Nat Commun, 11, 2020
3SP8
DownloadVisualize
BU of 3sp8 by Molmil
Crystal structure of NK2 in complex with fractionated Heparin DP10
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Recacha, R, Mulloy, B, Gherardi, E.
Deposit date:2011-07-01
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of NK2 in complex with fractionated Heparin DP10
TO BE PUBLISHED
1CE0
DownloadVisualize
BU of 1ce0 by Molmil
TRIMERIZATION SPECIFICITY IN HIV-1 GP41: ANALYSIS WITH A GCN4 LEUCINE ZIPPER MODEL
Descriptor: PROTEIN (LEUCINE ZIPPER MODEL H38-P1)
Authors:Shu, W, Ji, H, Lu, M.
Deposit date:1999-03-12
Release date:1999-03-19
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Trimerization specificity in HIV-1 gp41: analysis with a GCN4 leucine zipper model.
Biochemistry, 38, 1999
1GSH
DownloadVisualize
BU of 1gsh by Molmil
STRUCTURE OF ESCHERICHIA COLI GLUTATHIONE SYNTHETASE AT PH 7.5
Descriptor: GLUTATHIONE BIOSYNTHETIC LIGASE
Authors:Matsuda, K, Kato, H, Yamaguchi, H, Nishioka, T, Katsube, Y, Oda, J.
Deposit date:1995-05-16
Release date:1996-07-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of glutathione synthetase at optimal pH: domain architecture and structural similarity with other proteins.
Protein Eng., 9, 1996
7W4Z
DownloadVisualize
BU of 7w4z by Molmil
Crystal structure of fragmin domain-1 in complex with actin (AMPPNP-form)
Descriptor: 1,2-ETHANEDIOL, Actin, alpha skeletal muscle, ...
Authors:Takeda, S.
Deposit date:2021-11-29
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structures and mechanisms of actin ATP hydrolysis.
Proc.Natl.Acad.Sci.USA, 119, 2022
7W50
DownloadVisualize
BU of 7w50 by Molmil
Crystal structure of fragmin domain-1 in complex with actin (ADP-Pi-form)
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Actin, ...
Authors:Takeda, S.
Deposit date:2021-11-29
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structures and mechanisms of actin ATP hydrolysis.
Proc.Natl.Acad.Sci.USA, 119, 2022
7W52
DownloadVisualize
BU of 7w52 by Molmil
Crystal structure of fragmin domain-1 (15-160) in complex with actin
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Takeda, S.
Deposit date:2021-11-29
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structures and mechanisms of actin ATP hydrolysis.
Proc.Natl.Acad.Sci.USA, 119, 2022
7V1W
DownloadVisualize
BU of 7v1w by Molmil
Difructose dianhydride I synthase/hydrolase (alphaFFase1) from Bifidobacterium dentium in complex with beta-D-arabinofuranose
Descriptor: CALCIUM ION, Difructose dianhydride I synthase/hydrolase (alphaFFase1), beta-D-arabinofuranose
Authors:Kashima, T, Arakawa, T, Yamada, C, Fujita, K, Fushinobu, S.
Deposit date:2021-08-06
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Identification of difructose dianhydride I synthase/hydrolase from an oral bacterium establishes a novel glycoside hydrolase family.
J.Biol.Chem., 297, 2021
7V1X
DownloadVisualize
BU of 7v1x by Molmil
Difructose dianhydride I synthase/hydrolase (alphaFFase1) from Bifidobacterium dentium in complex with beta-D-fructofuranose
Descriptor: CALCIUM ION, Difructose dianhydride I synthase/hydrolase, beta-D-fructofuranose
Authors:Kashima, T, Arakawa, T, Yamada, C, Fujita, K, Fushinobu, S.
Deposit date:2021-08-06
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Identification of difructose dianhydride I synthase/hydrolase from an oral bacterium establishes a novel glycoside hydrolase family.
J.Biol.Chem., 297, 2021
7V1V
DownloadVisualize
BU of 7v1v by Molmil
Difructose dianhydride I synthase/hydrolase (alphaFFase1) from Bifidobacterium dentium, ligand-free form
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, D(-)-TARTARIC ACID, ...
Authors:Kashima, T, Arakawa, T, Yamada, C, Fujita, K, Fushinobu, S.
Deposit date:2021-08-06
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Identification of difructose dianhydride I synthase/hydrolase from an oral bacterium establishes a novel glycoside hydrolase family.
J.Biol.Chem., 297, 2021
7W51
DownloadVisualize
BU of 7w51 by Molmil
Crystal structure of fragmin domain-1 in complex with actin (ADP-form)
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Actin, ...
Authors:Takeda, S.
Deposit date:2021-11-29
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structures and mechanisms of actin ATP hydrolysis.
Proc.Natl.Acad.Sci.USA, 119, 2022
7YNE
DownloadVisualize
BU of 7yne by Molmil
Crystal structure of fragmin domain-1 (1-160) in complex with G-form actin
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Takeda, S.
Deposit date:2022-07-30
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures and mechanisms of actin ATP hydrolysis.
Proc.Natl.Acad.Sci.USA, 119, 2022
1BD0
DownloadVisualize
BU of 1bd0 by Molmil
ALANINE RACEMASE COMPLEXED WITH ALANINE PHOSPHONATE
Descriptor: ALANINE RACEMASE, {1-[(3-HYDROXY-METHYL-5-PHOSPHONOOXY-METHYL-PYRIDIN-4-YLMETHYL)-AMINO]-ETHYL}-PHOSPHONIC ACID
Authors:Stamper, G.F, Morollo, A.A, Ringe, D.
Deposit date:1998-05-12
Release date:1998-10-14
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Reaction of alanine racemase with 1-aminoethylphosphonic acid forms a stable external aldimine.
Biochemistry, 37, 1998

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon