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4TV0
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BU of 4tv0 by Molmil
Drosophila stem-loop binding protein complexed with histone mRNA stem-loop, Selenomethionine derivative
Descriptor: CALCIUM ION, Histone RNA hairpin-binding protein, RNA (26-MER)
Authors:Zhang, J.
Deposit date:2014-06-25
Release date:2014-09-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Molecular mechanisms for the regulation of histone mRNA stem-loop-binding protein by phosphorylation.
Proc.Natl.Acad.Sci.USA, 111, 2014
4TZZ
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BU of 4tzz by Molmil
Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization
Descriptor: MAGNESIUM ION, Ribosome-associated protein L7Ae-like, T-box Stem I RNA, ...
Authors:Zhang, J, Ferre-D'Amare, A.R.
Deposit date:2014-07-11
Release date:2014-09-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:Dramatic Improvement of Crystals of Large RNAs by Cation Replacement and Dehydration.
Structure, 22, 2014
4TUX
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BU of 4tux by Molmil
drosophila stem-loop binding protein complexed with histone mRNA stem-loop
Descriptor: CALCIUM ION, Histone RNA hairpin-binding protein, RNA (26-MER)
Authors:Zhang, J.
Deposit date:2014-06-25
Release date:2014-07-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Molecular mechanisms for the regulation of histone mRNA stem-loop-binding protein by phosphorylation.
Proc.Natl.Acad.Sci.USA, 111, 2014
4TZY
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BU of 4tzy by Molmil
Vibrio vulnificus Adenine Riboswitch Variant, grown in both Sr2+ and Mg2+
Descriptor: ADENINE, MAGNESIUM ION, STRONTIUM ION, ...
Authors:Zhang, J, Ferre-D'Amare, A.R.
Deposit date:2014-07-11
Release date:2014-09-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Dramatic Improvement of Crystals of Large RNAs by Cation Replacement and Dehydration.
Structure, 22, 2014
7T5H
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BU of 7t5h by Molmil
Structure of rabies virus phosphoprotein C-terminal domain, wild type
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, Phosphoprotein, ...
Authors:Zhan, J, Metcalfe, R.D, Gooley, P.R, Griffin, M.D.W.
Deposit date:2021-12-12
Release date:2022-04-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular Basis of Functional Effects of Phosphorylation of the C-Terminal Domain of the Rabies Virus P Protein.
J.Virol., 96, 2022
7T5G
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BU of 7t5g by Molmil
Structure of rabies virus phosphoprotein C-terminal domain, S210E mutant
Descriptor: Phosphoprotein, SULFATE ION
Authors:Zhan, J, Metcalfe, R.D, Gooley, P.R, Griffin, M.D.W.
Deposit date:2021-12-12
Release date:2022-04-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular Basis of Functional Effects of Phosphorylation of the C-Terminal Domain of the Rabies Virus P Protein.
J.Virol., 96, 2022
7WKJ
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BU of 7wkj by Molmil
A COVID-19 T-cell response detection method based on a newly identified human CD8+ T cell epitope from SARS-CoV-2-Hubei Province, 2021.
Descriptor: Beta-2-microglobulin, LYS-THR-PHE-PRO-PRO-THR-GLU-PRO-LYS, MHC class I antigen
Authors:Zhang, J, Lu, D, Li, M, Liu, M.S, Yao, S.J, Zhan, J.B, Liu, J, Gao, G.F.
Deposit date:2022-01-10
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A COVID-19 T-Cell Response Detection Method Based on a Newly Identified Human CD8 + T Cell Epitope from SARS-CoV-2 - Hubei Province, China, 2021.
China CDC Wkly, 4, 2022
8TDM
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BU of 8tdm by Molmil
Cryo-EM structure of AtMSL10-K539E
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
8TDJ
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BU of 8tdj by Molmil
Cryo-EM structure of the wild-type AtMSL10 in GDN
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
8TDK
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BU of 8tdk by Molmil
Cryo-EM structure of AtMSL10-G556V
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
8TDL
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BU of 8tdl by Molmil
Cryo-EM structure of the wild-type AtMSL10 in saposin
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
6FK5
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BU of 6fk5 by Molmil
Structure of 3' phosphatase NExo (D146N) from Neisseria bound to DNA substrate in presence of magnesium ion
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(P*CP*TP*AP*GP*CP*GP*AP*AP*GP*CP*TP*AP*GP*A)-3'), MAGNESIUM ION, ...
Authors:Silhan, J, Zhao, Q, Boura, E, Thomson, H, Foster, A, Tang, C.M, Freemont, P.S, Baldwin, G.S.
Deposit date:2018-01-23
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural basis for recognition and repair of the 3'-phosphate by NExo, a base excision DNA repair nuclease from Neisseria meningitidis.
Nucleic Acids Res., 46, 2018
1XG7
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BU of 1xg7 by Molmil
Conserved hypothetical protein Pfu-877259-001 from Pyrococcus furiosus
Descriptor: hypothetical protein
Authors:Chang, J, Zhao, M, Horanyi, P, Xu, H, Yang, H, Liu, Z.-J, Chen, L, Zhou, W, Habel, J, Tempel, W, Lee, D, Lin, D, Chang, S.-H, Eneh, J.C, Hopkins, R.C, Jenney Jr, F.E, Lee, H.-S, Li, T, Poole II, F.L, Shah, C, Sugar, F.J, Chen, C.-Y, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Rose, J.P, Adams, M.W.W, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-09-16
Release date:2004-11-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Conserved hypothetical protein Pfu-877259-001 from Pyrococcus furiosus
To be published
6FK4
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BU of 6fk4 by Molmil
Structure of 3' phosphatase NExo (WT) from Neisseria bound to DNA substrate
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(P*GP*CP*TP*AP*GP*CP*GP*AP*AP*GP*CP*TP*AP*GP*A)-3'), Exodeoxyribonuclease III
Authors:Silhan, J, Zhao, Q, Boura, E, Thomson, H, Foster, A, Tang, C.M, Freemont, P.S, Baldwin, G.S.
Deposit date:2018-01-23
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.297 Å)
Cite:Structural basis for recognition and repair of the 3'-phosphate by NExo, a base excision DNA repair nuclease from Neisseria meningitidis.
Nucleic Acids Res., 46, 2018
6FKE
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BU of 6fke by Molmil
Structure of 3' phosphatase NExo (D146N) from Neisseria bound to product DNA hairpin
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*GP*TP*AP*GP*CP*GP*AP*AP*GP*CP*TP*A)-3'), Exodeoxyribonuclease III, ...
Authors:Silhan, J, Zhao, Q, Boura, E, Thomson, H, Foster, A, Tang, C.M, Freemont, P.S, Baldwin, G.S.
Deposit date:2018-01-23
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Structural basis for recognition and repair of the 3'-phosphate by NExo, a base excision DNA repair nuclease from Neisseria meningitidis.
Nucleic Acids Res., 46, 2018
6WPI
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BU of 6wpi by Molmil
Crystal structure of Nop9 in complex with ITS1 RNA
Descriptor: 3,3',3''-phosphanetriyltripropanoic acid, GLYCEROL, Nucleolar protein 9, ...
Authors:Zhang, J, Qiu, C, Hall, T.M.T.
Deposit date:2020-04-27
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Nop9 recognizes structured and single-stranded RNA elements of preribosomal RNA.
Rna, 26, 2020
5UGM
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BU of 5ugm by Molmil
Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Edaglitazone
Descriptor: (5R)-5-({4-[2-(5-methyl-2-phenyl-1,3-oxazol-4-yl)ethoxy]-1-benzothiophen-7-yl}methyl)-1,3-thiazolidine-2,4-dione, Peroxisome proliferator-activated receptor gamma, nonanoic acid
Authors:Shang, J, Kojetin, D.J.
Deposit date:2017-01-09
Release date:2018-01-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Cooperative cobinding of synthetic and natural ligands to the nuclear receptor PPAR gamma.
Elife, 7, 2018
3J03
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BU of 3j03 by Molmil
Lidless Mm-cpn in the closed state with ATP/AlFx
Descriptor: Lidless Mm-cpn
Authors:Zhang, J, Ma, B, DiMaio, F, Douglas, N.R, Joachimiak, L, Baker, D, Frydman, J, Levitt, M, Chiu, W.
Deposit date:2011-02-10
Release date:2011-05-18
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cryo-EM structure of a group II chaperonin in the prehydrolysis ATP-bound state leading to lid closure.
Structure, 19, 2011
5SVD
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BU of 5svd by Molmil
Nop9, a new PUF-like protein, prevents premature pre-rRNA cleavage to correctly process mature 18S rRNA
Descriptor: Nucleolar protein 9
Authors:Zhang, J, Qiu, C, Hall, T.
Deposit date:2016-08-05
Release date:2016-10-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Nop9 is a PUF-like protein that prevents premature cleavage to correctly process pre-18S rRNA.
Nat Commun, 7, 2016
5T9P
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BU of 5t9p by Molmil
Structural analysis reveals the flexible C-terminus of Nop15 undergoes rearrangement to recognize a pre-ribosomal RNA folding intermediate
Descriptor: CHLORIDE ION, Ribosome biogenesis protein 15, SULFATE ION
Authors:Zhang, J, Gonzalez, E.L, Hall, M.T.T.
Deposit date:2016-09-09
Release date:2016-11-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis reveals the flexible C-terminus of Nop15 undergoes rearrangement to recognize a pre-ribosomal RNA folding intermediate.
Nucleic Acids Res., 45, 2017
6AR6
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BU of 6ar6 by Molmil
Clostridioides difficile toxinB with DLD-4 darpin
Descriptor: DLD-4 darpin, Toxin B
Authors:Zhang, J, Jiang, M.
Deposit date:2017-08-21
Release date:2018-08-22
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Clostridioides difficile toxinB with DLD-4 darpin
To Be Published
7KRR
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BU of 7krr by Molmil
Structural impact on SARS-CoV-2 spike protein by D614G substitution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Lu, J.M, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Zhu, H.S, Woosley, A.N, Yang, W, Sliz, P, Chen, B.
Deposit date:2020-11-20
Release date:2021-03-24
Last modified:2021-05-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural impact on SARS-CoV-2 spike protein by D614G substitution.
Science, 372, 2021
7KRS
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BU of 7krs by Molmil
Structural impact on SARS-CoV-2 spike protein by D614G substitution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Lu, J.M, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Zhu, H.S, Woosley, A.N, Yang, W, Sliz, P, Chen, B.
Deposit date:2020-11-20
Release date:2021-03-24
Last modified:2021-05-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural impact on SARS-CoV-2 spike protein by D614G substitution.
Science, 372, 2021
7KRQ
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BU of 7krq by Molmil
Structural impact on SARS-CoV-2 spike protein by D614G substitution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Lu, J.M, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Zhu, H.S, Woosley, A.N, Yang, W, Sliz, P, Chen, B.
Deposit date:2020-11-20
Release date:2021-03-31
Last modified:2021-05-12
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structural impact on SARS-CoV-2 spike protein by D614G substitution.
Science, 372, 2021
6V9O
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BU of 6v9o by Molmil
Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Descriptor: 3-(phenylsulfonyl)benzene-1-sulfonamide, FORMIC ACID, GLYCEROL, ...
Authors:Phan, J, Fesik, S.W.
Deposit date:2019-12-13
Release date:2020-12-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
To Be Published

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