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4FJH
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BU of 4fjh by Molmil
RB69 DNA polymerase ternary complex with dGTP/dC
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-06-11
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013
4FJJ
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BU of 4fjj by Molmil
RB69 DNA polymerase ternary complex with dTTP/dC
Descriptor: CALCIUM ION, DNA polymerase, DNA primer, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-06-11
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:DNA mismatch synthesis complexes provide insights into base selectivity of a B family DNA polymerase.
J.Am.Chem.Soc., 135, 2013
4E3S
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BU of 4e3s by Molmil
RB69 DNA Polymerase Ternary Complex with dQTP Opposite dT
Descriptor: 3-{2-deoxy-5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-7-methyl-3H-imidazo[4,5-b]pyridine, CALCIUM ION, DNA polymerase, ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2012-03-10
Release date:2012-05-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Probing minor groove hydrogen bonding interactions between RB69 DNA polymerase and DNA.
Biochemistry, 51, 2012
4DWR
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BU of 4dwr by Molmil
RNA ligase RtcB/Mn2+ complex
Descriptor: MANGANESE (II) ION, SULFATE ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, ...
Authors:Xia, S, Englert, M, Soll, D, Wang, J.
Deposit date:2012-02-26
Release date:2012-09-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural and mechanistic insights into guanylylation of RNA-splicing ligase RtcB joining RNA between 3'-terminal phosphate and 5'-OH.
Proc.Natl.Acad.Sci.USA, 109, 2012
4MM2
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BU of 4mm2 by Molmil
Crystal structure of yeast primase catalytic subunit
Descriptor: CADMIUM ION, CITRIC ACID, DNA primase small subunit
Authors:Park, K.R, An, J.Y, Lee, Y, Youn, H.S, Lee, J.G, Kang, J.Y, Kim, T.G, Lim, J.J, Eom, S.H, Wang, J.
Deposit date:2013-09-07
Release date:2014-09-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of yeast primase catalytic subunit
To be Published
5WX8
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BU of 5wx8 by Molmil
Human herpesvirus 6A immediate early protein 2 C-terminal domain
Descriptor: Immediate-early protein 2
Authors:Nishimura, M, Wang, J, Wakata, A, Sakamoto, K, Mori, Y.
Deposit date:2017-01-06
Release date:2017-08-02
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the DNA-Binding Domain of Human Herpesvirus 6A Immediate Early Protein 2.
J. Virol., 91, 2017
5GND
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BU of 5gnd by Molmil
Structure of Deg protease HhoA from Synechocystis sp. PCC 6803
Descriptor: Putative serine protease HhoA, SODIUM ION, UNK-UNK-UNK-UNK-TRP, ...
Authors:Dong, W, Wang, J, Liu, L.
Deposit date:2016-07-20
Release date:2016-09-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the zinc-bound HhoA protease from Synechocystis sp. PCC 6803
Febs Lett., 590, 2016
5X40
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BU of 5x40 by Molmil
Structure of a CbiO dimer bound with AMPPCP
Descriptor: Cobalt ABC transporter ATP-binding protein, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
Authors:Bao, Z, Qi, X, Wang, J, Zhang, P.
Deposit date:2017-02-09
Release date:2017-04-05
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure and mechanism of a group-I cobalt energy coupling factor transporter
Cell Res., 27, 2017
5X3X
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BU of 5x3x by Molmil
2.8A resolution structure of a cobalt energy-coupling factor transporter-CbiMQO
Descriptor: Cobalt ABC transporter ATP-binding protein, Cobalt transport protein CbiM, Uncharacterized protein CbiQ
Authors:Bao, Z, Qi, X, Wang, J, Zhang, P.
Deposit date:2017-02-09
Release date:2017-04-05
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.788 Å)
Cite:Structure and mechanism of a group-I cobalt energy coupling factor transporter
Cell Res., 27, 2017
5XMM
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BU of 5xmm by Molmil
FLA-E*01801-167W/S
Descriptor: Beta-2-microglobulin, Gag polyprotein, MHC class I antigen alpha chain
Authors:Liang, R, Sun, Y, Wang, J, Wu, Y, Zhang, N, Xia, C.
Deposit date:2017-05-15
Release date:2017-12-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Major Histocompatibility Complex Class I (FLA-E*01801) Molecular Structure in Domestic Cats Demonstrates Species-Specific Characteristics in Presenting Viral Antigen Peptides
J. Virol., 92, 2018
5XMF
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BU of 5xmf by Molmil
Crystal structure of feline MHC class I for 2,1 angstrom
Descriptor: Beta-2-microglobulin, Gag polyprotein, MHC class I antigen alpha chain
Authors:Liang, R, Sun, Y, Wang, J, Wu, Y, Zhang, N, Xia, C.
Deposit date:2017-05-15
Release date:2017-12-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Major Histocompatibility Complex Class I (FLA-E*01801) Molecular Structure in Domestic Cats Demonstrates Species-Specific Characteristics in Presenting Viral Antigen Peptides
J. Virol., 92, 2018
5HBY
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BU of 5hby by Molmil
RNA primer-template complex with 2-methylimidazole-activated monomer analogue-3 binding sites
Descriptor: MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*C)-3'), [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-(3-methyl-1~{H}-pyrazol-4-yl)phosphinic acid
Authors:Zhang, W, Tam, C.P, Wang, J, Szostak, J.W.
Deposit date:2016-01-03
Release date:2016-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Unusual Base-Pairing Interactions in Monomer-Template Complexes.
ACS Cent Sci, 2, 2016
4PLX
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BU of 4plx by Molmil
Crystal structure of the triple-helical stability element at the 3' end of MALAT1
Descriptor: Core ENE hairpin and A-rich tract from MALAT1
Authors:Brown, J.A, Bulkley, D, Wang, J, Valenstein, M.L, Yario, T.A, Steitz, T.A, Steitz, J.A.
Deposit date:2014-05-19
Release date:2014-06-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural insights into the stabilization of MALAT1 noncoding RNA by a bipartite triple helix.
Nat.Struct.Mol.Biol., 21, 2014
5FKP
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BU of 5fkp by Molmil
Crystal structure of the mouse CD1d in complex with the p99 peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIGEN-PRESENTING GLYCOPROTEIN CD1D1, BETA 2 MICROGLOBULIN, ...
Authors:Girardi, E, Wang, J, Zajonc, D.M.
Deposit date:2015-10-18
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of an Alpha-Helical Peptide and Lipopeptide Bound to the Non-Classical Mhc Class I Molecule Cd1D
J.Biol.Chem., 291, 2016
4Q0F
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BU of 4q0f by Molmil
Crystal Structure of Thermotoga maritima FtsH Periplasmic domain
Descriptor: ATP-dependent zinc metalloprotease FtsH
Authors:An, J.Y, Sharif, H, Barrera, F.N, Karabadzhak, A, Kang, G.B, Park, K.J, Sakkiah, S, Lee, K.W, Lee, S, Engelman, D.M, Wang, J, Eom, S.H.
Deposit date:2014-04-01
Release date:2015-04-01
Method:X-RAY DIFFRACTION (1.948 Å)
Cite:Structures of periplasmic and transmembrane domains of FtsH suggest a reverse translocon mechanism for protein extraction from membrane
To be Published
4HYD
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BU of 4hyd by Molmil
Structure of a presenilin family intramembrane aspartate protease in C2221 space group
Descriptor: Putative uncharacterized protein
Authors:Li, X, Dang, S, Yan, C, Wang, J, Shi, Y.
Deposit date:2012-11-13
Release date:2012-12-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structure of a presenilin family intramembrane aspartate protease
Nature, 493, 2013
4ILD
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BU of 4ild by Molmil
Crystal structure of truncated Bovine viral diarrhea virus 1 E2 envelope protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Envelope glycoprotein E2, ...
Authors:Modis, Y, Li, Y, Wang, J.
Deposit date:2012-12-30
Release date:2013-04-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Crystal structure of glycoprotein E2 from bovine viral diarrhea virus.
Proc.Natl.Acad.Sci.USA, 110, 2013
7D74
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BU of 7d74 by Molmil
Cryo-EM structure of GMPPA/GMPPB complex bound to GTP (state II)
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Mannose-1-phosphate guanyltransferase alpha, Mannose-1-phosphate guanyltransferase beta
Authors:Zheng, L, Liu, Z, Wang, Y, Yang, F, Wang, J, Qing, J, cai, X, Mo, X, Gao, N, Jia, D.
Deposit date:2020-10-02
Release date:2021-05-19
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of human GMPPA-GMPPB complex reveal how cells maintain GDP-mannose homeostasis.
Nat.Struct.Mol.Biol., 28, 2021
4IU9
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BU of 4iu9 by Molmil
Crystal structure of a membrane transporter
Descriptor: Nitrite extrusion protein 2
Authors:Yan, H, Huang, W, Yan, C, Gong, X, Jiang, S, Zhao, Y, Wang, J, Shi, Y.
Deposit date:2013-01-20
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.005 Å)
Cite:Structure and mechanism of a nitrate transporter.
Cell Rep, 3, 2013
2LUA
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BU of 2lua by Molmil
Solution structure of CXC domain of MSL2
Descriptor: Protein male-specific lethal-2, ZINC ION
Authors:Feng, Y, Ye, K, Zheng, S, Wang, J.
Deposit date:2012-06-09
Release date:2012-10-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of MSL2 CXC Domain Reveals an Unusual Zn(3)Cys(9) Cluster and Similarity to Pre-SET Domains of Histone Lysine Methyltransferases.
Plos One, 7, 2012
4IU8
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BU of 4iu8 by Molmil
Crystal structure of a membrane transporter (selenomethionine derivative)
Descriptor: NITRATE ION, Nitrite extrusion protein 2
Authors:Yan, H, Huang, W, Yan, C, Gong, X, Jiang, S, Zhao, Y, Wang, J, Shi, Y.
Deposit date:2013-01-20
Release date:2013-04-17
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Structure and mechanism of a nitrate transporter.
Cell Rep, 3, 2013
4J2D
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BU of 4j2d by Molmil
RB69 DNA Polymerase L415K Ternary Complex
Descriptor: CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*T)-3'), DNA (5'-D(*TP*CP*GP*AP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3'), ...
Authors:Xia, S, Wang, J, Konigsberg, W.H.
Deposit date:2013-02-04
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Role of L415 in the Replication of RB69 DNA Polymerase
To be Published
4JNT
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BU of 4jnt by Molmil
Crystal structure of the ectodomain of Bovine viral diarrhea virus 1 E2 envelope protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein E2
Authors:Li, Y, Wang, J, Modis, Y.
Deposit date:2013-03-15
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (4.09 Å)
Cite:Crystal structure of glycoprotein E2 from bovine viral diarrhea virus.
Proc.Natl.Acad.Sci.USA, 110, 2013
8GTY
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BU of 8gty by Molmil
Crystal structure of exopolyphosphatase (PPX) from Zymomonas mobilis in complex with magnesium ions
Descriptor: MAGNESIUM ION, Ppx/GppA phosphatase
Authors:Lu, Z, Wang, J, Zhang, B.
Deposit date:2022-09-09
Release date:2023-09-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the exopolyphosphatase (PPX) from Zymomonas mobilis reveals a two-magnesium-ions PPX.
Int.J.Biol.Macromol., 262, 2024
7WU1
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BU of 7wu1 by Molmil
Crystal structure of phospholipase D from Moritella sp. JT01
Descriptor: 1,2-ETHANEDIOL, Phospholipase D, SODIUM ION
Authors:Wang, Y.H, Mao, X.J, Wang, J, Wang, F.H.
Deposit date:2022-02-05
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of phospholipase D from Moritella sp. JT01
To Be Published

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PDB entries from 2024-09-11

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