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6DBN
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BU of 6dbn by Molmil
Jak1 with compound 23
Descriptor: Tyrosine-protein kinase JAK1, [(1S)-2,2-difluorocyclopropyl][(1R,5S)-3-{2-[(1-methyl-1H-pyrazol-4-yl)amino]pyrimidin-4-yl}-3,8-diazabicyclo[3.2.1]octan-8-yl]methanone
Authors:Vajdos, F.F.
Deposit date:2018-05-03
Release date:2018-08-29
Last modified:2018-11-07
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Dual Inhibition of TYK2 and JAK1 for the Treatment of Autoimmune Diseases: Discovery of (( S)-2,2-Difluorocyclopropyl)((1 R,5 S)-3-(2-((1-methyl-1 H-pyrazol-4-yl)amino)pyrimidin-4-yl)-3,8-diazabicyclo[3.2.1]octan-8-yl)methanone (PF-06700841).
J. Med. Chem., 61, 2018
8Z0L
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BU of 8z0l by Molmil
Cryo-EM structure of Cas8-HNH system at partial R-loop state
Descriptor: DNA (32-MER), DNA (5'-D(P*GP*TP*GP*CP*GP*GP*A)-3'), HNH endonuclease, ...
Authors:Zhang, H, Zhu, H, Li, X, Liu, Y.
Deposit date:2024-04-09
Release date:2024-10-02
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Structural basis for the type I-F Cas8-HNH system.
Embo J., 2024
8ZDY
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BU of 8zdy by Molmil
Cryo-EM structure of Cas8-HNH system at target free state
Descriptor: RNA (58-MER), a protein
Authors:Zhang, H, Zhu, H, Li, X, Liu, Y.
Deposit date:2024-05-03
Release date:2024-10-02
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis for the type I-F Cas8-HNH system.
Embo J., 2024
8Z0K
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BU of 8z0k by Molmil
Cryo-EM structure of Cas8-HNH system at full R-loop state
Descriptor: DNA (37-MER), DNA (5'-D(P*GP*TP*GP*CP*GP*GP*A)-3'), HNH endonuclease, ...
Authors:Zhang, H, Zhu, H, Li, X, Liu, Y.
Deposit date:2024-04-09
Release date:2024-10-02
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:Structural basis for the type I-F Cas8-HNH system.
Embo J., 2024
8ZNR
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BU of 8znr by Molmil
Cryo-EM structure of Cas8-HNH system at ssDNA-bound state
Descriptor: DNA (35-MER), RNA (56-MER), protein structure
Authors:Zhang, H, Zhu, H, Li, X, Liu, Y.
Deposit date:2024-05-28
Release date:2024-10-02
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for the type I-F Cas8-HNH system.
Embo J., 2024
5XMM
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BU of 5xmm by Molmil
FLA-E*01801-167W/S
Descriptor: Beta-2-microglobulin, Gag polyprotein, MHC class I antigen alpha chain
Authors:Liang, R, Sun, Y, Wang, J, Wu, Y, Zhang, N, Xia, C.
Deposit date:2017-05-15
Release date:2017-12-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Major Histocompatibility Complex Class I (FLA-E*01801) Molecular Structure in Domestic Cats Demonstrates Species-Specific Characteristics in Presenting Viral Antigen Peptides
J. Virol., 92, 2018
7QUB
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BU of 7qub by Molmil
EV-A71-3Cpro in complex with inhibitor MG78
Descriptor: (1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, Protease 3C, SODIUM ION
Authors:El Kilani, H, Hilgenfeld, R.
Deposit date:2022-01-17
Release date:2022-04-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:From Repurposing to Redesign: Optimization of Boceprevir to Highly Potent Inhibitors of the SARS-CoV-2 Main Protease.
Molecules, 27, 2022
7QG1
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BU of 7qg1 by Molmil
IRAK4 in complex with inhibitor
Descriptor: Interleukin-1 receptor-associated kinase 4, methyl 4-[4-[[6-(cyanomethyl)-2-[(1-methylpyrazol-4-yl)amino]-5-oxidanylidene-pyrido[4,3-d]pyrimidin-4-yl]amino]cyclohexyl]piperazine-1-carboxylate
Authors:Xue, Y, Aagaard, A, Robb, G.R, Degorce, S.L.
Deposit date:2021-12-07
Release date:2022-05-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Identification and optimisation of a pyrimidopyridone series of IRAK4 inhibitors.
Bioorg.Med.Chem., 63, 2022
7QL8
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BU of 7ql8 by Molmil
SARS-COV2 Main Protease in complex with inhibitor MG78
Descriptor: (1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5, CHLORIDE ION, ...
Authors:El Kilani, H, Hilgenfeld, R.
Deposit date:2021-12-19
Release date:2022-04-27
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (1.807 Å)
Cite:From Repurposing to Redesign: Optimization of Boceprevir to Highly Potent Inhibitors of the SARS-CoV-2 Main Protease.
Molecules, 27, 2022
7QG5
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BU of 7qg5 by Molmil
IRAK4 in complex with inhibitor
Descriptor: 4-[(1-methylcyclopropyl)amino]-2-[[1-(1-methylpiperidin-4-yl)pyrazol-4-yl]amino]-6-pyrimidin-5-yl-pyrido[4,3-d]pyrimidin-5-one, Interleukin-1 receptor-associated kinase 4
Authors:Xue, Y, Aagaard, A, Robb, G.R, Degorce, S.L.
Deposit date:2021-12-07
Release date:2022-05-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification and optimisation of a pyrimidopyridone series of IRAK4 inhibitors.
Bioorg.Med.Chem., 63, 2022
7QG2
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BU of 7qg2 by Molmil
IRAK4 in complex with inhibitor
Descriptor: 6-methyl-4-[(1-methylcyclopropyl)amino]-2-[[1-(1-methylpiperidin-4-yl)pyrazol-4-yl]amino]pyrido[4,3-d]pyrimidin-5-one, Interleukin-1 receptor-associated kinase 4
Authors:Xue, Y, Aagaard, A, Robb, G.R, Degorce, S.L.
Deposit date:2021-12-07
Release date:2022-05-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.031 Å)
Cite:Identification and optimisation of a pyrimidopyridone series of IRAK4 inhibitors.
Bioorg.Med.Chem., 63, 2022
7QG3
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BU of 7qg3 by Molmil
IRAK4 in complex with inhibitor
Descriptor: 6-[(2~{S})-2-fluoranylpropyl]-4-[(1-methylcyclopropyl)amino]-2-[[1-(1-methylpiperidin-4-yl)pyrazol-4-yl]amino]pyrido[4,3-d]pyrimidin-5-one, Interleukin-1 receptor-associated kinase 4
Authors:Xue, Y, Aagaard, A, Robb, G.R, Degorce, S.L.
Deposit date:2021-12-07
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Identification and optimisation of a pyrimidopyridone series of IRAK4 inhibitors.
Bioorg.Med.Chem., 63, 2022
5T0F
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BU of 5t0f by Molmil
Crystal structure of the Myc3 N-terminal domain [44-242] in complex with JAZ10 CMID domain [16-58] from arabidopsis
Descriptor: Protein TIFY 9, Transcription factor MYC3
Authors:Ke, J, Zhang, F, Brunzelle, J.S, He, S.Y, Xu, H.E, Melcher, K.
Deposit date:2016-08-16
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into alternative splicing-mediated desensitization of jasmonate signaling.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5J8V
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BU of 5j8v by Molmil
Structure of rabbit ryanodine receptor RyR1 open state activated by calcium ion
Descriptor: Ryanodine receptor 1
Authors:Wang, X, Wei, R, Yin, C, Sun, F.
Deposit date:2016-04-08
Release date:2016-09-14
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structural insights into Ca(2+)-activated long-range allosteric channel gating of RyR1
Cell Res., 26, 2016
8IXV
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BU of 8ixv by Molmil
Crystal structure of intracellular B30.2 domain of BTN3A in complex with 2Cl-HMBPP
Descriptor: 1,2-ETHANEDIOL, Butyrophilin subfamily 3 member A1, DI(HYDROXYETHYL)ETHER, ...
Authors:Yang, Y.Y, Yi, S.M, Huang, J.W, Chen, C.C, Guo, R.T.
Deposit date:2023-04-03
Release date:2023-09-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Phosphoantigens glue butyrophilin 3A1 and 2A1 to activate V gamma 9V delta 2 T cells.
Nature, 621, 2023
7F70
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BU of 7f70 by Molmil
Crystal structure of Rv3094c
Descriptor: Rv3094c
Authors:Wang, Z.X, Ouyang, S.Y, Zhang, H.T.
Deposit date:2021-06-26
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Omics analysis of Mycobacterium tuberculosis isolates uncovers Rv3094c, an ethionamide metabolism-associated gene.
Commun Biol, 6, 2023
8IZG
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BU of 8izg by Molmil
Crystal structure of intracellular B30.2 domain of BTN3A1 in complex with 5-HMBPP
Descriptor: 1,2-ETHANEDIOL, Butyrophilin subfamily 3 member A1, DI(HYDROXYETHYL)ETHER, ...
Authors:Yang, Y.Y, Yi, S.M, Huang, J.W, Chen, C.C, Guo, R.T.
Deposit date:2023-04-07
Release date:2023-09-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Phosphoantigens glue butyrophilin 3A1 and 2A1 to activate V gamma 9V delta 2 T cells.
Nature, 621, 2023
8CYF
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BU of 8cyf by Molmil
WhiB3 bound to SigmaAr4-RNAP Beta flap tip chimera and DNA
Descriptor: CACODYLATE ION, DNA (5'-D(*CP*AP*CP*CP*AP*CP*AP*AP*CP*CP*GP*AP*TP*TP*TP*T)-3'), DNA (5'-D(*GP*AP*AP*AP*AP*TP*CP*GP*GP*TP*TP*GP*TP*GP*GP*T)-3'), ...
Authors:Wan, T, Zhang, L.M.
Deposit date:2022-05-23
Release date:2023-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structural basis of DNA binding by the WhiB-like transcription factor WhiB3 in Mycobacterium tuberculosis.
J.Biol.Chem., 299, 2023
7CRH
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BU of 7crh by Molmil
Cryo-EM structure of SKF83959 bound dopamine receptor DRD1-Gs signaling complex
Descriptor: (1S)-6-chloranyl-3-methyl-1-(3-methylphenyl)-1,2,4,5-tetrahydro-3-benzazepine-7,8-diol, D(1A) dopamine receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Yan, W, Shao, Z.H.
Deposit date:2020-08-13
Release date:2021-03-03
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Ligand recognition and allosteric regulation of DRD1-Gs signaling complexes.
Cell, 184, 2021
7CKW
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BU of 7ckw by Molmil
Cryo-EM structure of Fenoldopam bound dopamine receptor DRD1-Gs signaling complex
Descriptor: (1R)-6-chloranyl-1-(4-hydroxyphenyl)-2,3,4,5-tetrahydro-1H-3-benzazepine-7,8-diol, CHOLESTEROL, D(1A) dopamine receptor, ...
Authors:Yan, W, Shao, W.
Deposit date:2020-07-20
Release date:2021-03-03
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Ligand recognition and allosteric regulation of DRD1-Gs signaling complexes.
Cell, 184, 2021
4YWC
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BU of 4ywc by Molmil
Crystal structure of Myc3(5-242) fragment in complex with Jaz9(218-239) peptide
Descriptor: Protein TIFY 7, Transcription factor MYC3
Authors:Ke, J, Zhang, F, Brunzelle, J.S, Xu, H.E, Melcher, K, He, S.Y.
Deposit date:2015-03-20
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of JAZ repression of MYC transcription factors in jasmonate signalling.
Nature, 525, 2015
7CKZ
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BU of 7ckz by Molmil
Cryo-EM structure of Dopamine and LY3154207 bound dopamine receptor DRD1-Gs signaling complex
Descriptor: 2-[2,6-bis(chloranyl)phenyl]-1-[(1S,3R)-3-(hydroxymethyl)-1-methyl-5-(3-methyl-3-oxidanyl-butyl)-3,4-dihydro-1H-isoquinolin-2-yl]ethanone, CHOLESTEROL, D(1A) dopamine receptor, ...
Authors:Yan, W, Shao, Z.
Deposit date:2020-07-20
Release date:2021-03-03
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Ligand recognition and allosteric regulation of DRD1-Gs signaling complexes.
Cell, 184, 2021
7CKY
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BU of 7cky by Molmil
Cryo-EM structure of PW0464 bound dopamine receptor DRD1-Gs signaling complex
Descriptor: 6-[4-[3-[bis(fluoranyl)methoxy]pyridin-2-yl]oxy-2-methyl-phenyl]-1,5-dimethyl-pyrimidine-2,4-dione, CHOLESTEROL, D(1A) dopamine receptor, ...
Authors:Yan, W, Shao, Z.
Deposit date:2020-07-20
Release date:2021-03-03
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Ligand recognition and allosteric regulation of DRD1-Gs signaling complexes.
Cell, 184, 2021
7CKX
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BU of 7ckx by Molmil
Cryo-EM structure of A77636 bound dopamine receptor DRD1-Gs signaling complex
Descriptor: (1R,3S)-3-(1-adamantyl)-1-(aminomethyl)-3,4-dihydro-1H-isochromene-5,6-diol, CHOLESTEROL, D(1A) dopamine receptor, ...
Authors:Yan, W, Shao, Z.
Deposit date:2020-07-20
Release date:2021-03-03
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Ligand recognition and allosteric regulation of DRD1-Gs signaling complexes.
Cell, 184, 2021
6LBE
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BU of 6lbe by Molmil
Crystal structure of bony fish MHC class I binding beta2M-2 for 2.6 angstrom
Descriptor: 9-mer peptide from RNA-DIRECTED RNA POLYMERASE L, Beta-2-microglobulin, MHC class I antigen
Authors:Li, Z.B, Xia, C.
Deposit date:2019-11-14
Release date:2020-11-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Mechanism of beta 2m Molecule-Induced Changes in the Peptide Presentation Profile in a Bony Fish.
Iscience, 23, 2020

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PDB entries from 2024-10-16

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