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5M98
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BU of 5m98 by Molmil
Crystal structure of urate oxidase from zebrafish
Descriptor: Uricase
Authors:Zanotti, G, Cendron, l, Percudani, R, Berni, R.
Deposit date:2016-11-01
Release date:2016-12-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Catalysis and Structure of Zebrafish Urate Oxidase Provide Insights into the Origin of Hyperuricemia in Hominoids.
Sci Rep, 6, 2016
5LL1
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BU of 5ll1 by Molmil
Crystal structure of urate oxidase from zebrafish
Descriptor: Uricase
Authors:Zanotti, G, Cendron, l, Percudani, R, Berni, R.
Deposit date:2016-07-26
Release date:2017-01-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Catalysis and Structure of Zebrafish Urate Oxidase Provide Insights into the Origin of Hyperuricemia in Hominoids.
Sci Rep, 6, 2016
2B5S
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BU of 2b5s by Molmil
Crystal structure of peach Pru p3, the prototypic member of the family of plant non-specific lipid transfer protein pan-allergens
Descriptor: HEPTANE, LAURIC ACID, Non-specific lipid transfer protein, ...
Authors:Pasquato, N, Berni, R, Folli, C, Folloni, S, Cianci, M, Pantano, S, Helliwell, R.J, Zanotti, G.
Deposit date:2005-09-29
Release date:2005-11-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structure of Peach Pru p 3, the Prototypic Member of the Family of Plant Non-specific Lipid Transfer Protein Pan-allergens
J.Mol.Biol., 356, 2006
2ALG
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BU of 2alg by Molmil
Crystal structure of peach Pru p3, the prototypic member of the family of plant non-specific lipid transfer protein pan-allergens
Descriptor: HEPTANE, HEXAETHYLENE GLYCOL, LAURIC ACID, ...
Authors:Pasquato, N, Berni, R, Folli, C, Folloni, S, Cianci, M, Pantano, S, Helliwell, J, Zanotti, G.
Deposit date:2005-08-05
Release date:2005-11-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Peach Pru p 3, the Prototypic Member of the Family of Plant Non-specific Lipid Transfer Protein Pan-allergens
J.Mol.Biol., 356, 2006
2RD3
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BU of 2rd3 by Molmil
Crystal structure of TenA homologue (HP1287) from Helicobacter pylori
Descriptor: Transcriptional regulator
Authors:Barison, N, Cendron, L, Trento, A, Angelini, A, Zanotti, G.
Deposit date:2007-09-21
Release date:2008-09-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structural and functional characterization of HP1287 from Helicobacter pylori demonstrates it is a TenA homologue
To be Published
2FJC
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BU of 2fjc by Molmil
Crystal structure of antigen TpF1 from Treponema pallidum
Descriptor: Antigen TpF1, FE (III) ION
Authors:Thumiger, A, Polenghi, A, Papinutto, E, Battistutta, R, Montecucco, C, Zanotti, G.
Deposit date:2006-01-02
Release date:2006-01-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of antigen TpF1 from Treponema pallidum.
Proteins, 62, 2006
4ZZF
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BU of 4zzf by Molmil
Crystal structure of truncated FlgD (tetragonal form) from the human pathogen Helicobacter pylori
Descriptor: Flagellar basal body rod modification protein
Authors:Pulic, I, Cendron, L, Salamina, M, Matkovic-Calogovic, D, Zanotti, G.
Deposit date:2015-05-22
Release date:2016-02-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1673 Å)
Cite:Crystal structure of truncated FlgD from the human pathogen Helicobacter pylori.
J.Struct.Biol., 194, 2016
5AL8
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BU of 5al8 by Molmil
Transthyretin binding heterogeneity and anti-amyloidogenic activity of natural polyphenols and their metabolites: daidzein-7-O- glucuronide
Descriptor: DAIDZEIN-7-O-GLUCURONIDE, TRANSTHYRETIN
Authors:Florio, P, Foll, C, Cianci, M, Del Rio, D, Zanotti, G, Berni, R.
Deposit date:2015-03-06
Release date:2015-10-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Transthyretin Binding Heterogeneity and Anti-Amyloidogenic Activity of Natural Polyphenols and Their Metabolites
J.Biol.Chem., 290, 2015
5AKS
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BU of 5aks by Molmil
Transthyretin binding heterogeneity and anti-amyloidogenic activity of natural polyphenols and their metabolites: resveratrol-3-O- glucuronide
Descriptor: DIMETHYL SULFOXIDE, Resveratrol-3-O-glucuronide, SULFATE ION, ...
Authors:Florio, P, Foll, C, Cianci, M, Del Rio, D, Zanotti, G, Berni, R.
Deposit date:2015-03-05
Release date:2015-10-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Transthyretin Binding Heterogeneity and Anti-Amyloidogenic Activity of Natural Polyphenols and Their Metabolites
J.Biol.Chem., 290, 2015
5K5Y
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BU of 5k5y by Molmil
Crystal structure of truncated FlgD (monoclinic form) from the human pathogen Helicobacter pylori (strain 26695)
Descriptor: Basal-body rod modification protein FlgD
Authors:Kekez, I, Cendron, L, Stojanovic, M, Zanotti, G, Matkovic-Calogovic, D.
Deposit date:2016-05-24
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure and Stability of FlgD from the Pathogenic 26695 Strain of Helicobacter pylori
Croatica Chemica Acta, 2016
7OH1
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BU of 7oh1 by Molmil
Tetanus neurotoxin LC-HN domain in complex with TT110-Fab1
Descriptor: FAB TT110, Tetanus toxin
Authors:Grinzato, A, Kandiah, E, Zanotti, G.
Deposit date:2021-05-07
Release date:2021-10-27
Last modified:2021-11-24
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Exceptionally potent human monoclonal antibodies are effective for prophylaxis and treatment of tetanus in mice.
J.Clin.Invest., 131, 2021
7OH0
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BU of 7oh0 by Molmil
Tetanus neurotoxin HC domain in complex with TT104-Fab1
Descriptor: Fab TT104, Tetanus toxin
Authors:Grinzato, A, Kandiah, E, Zanotti, G.
Deposit date:2021-05-07
Release date:2021-10-27
Last modified:2021-11-24
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Exceptionally potent human monoclonal antibodies are effective for prophylaxis and treatment of tetanus in mice.
J.Clin.Invest., 131, 2021
3CWX
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BU of 3cwx by Molmil
Crystal structure of cagd from helicobacter pylori pathogenicity island
Descriptor: protein CagD
Authors:Cendron, L, Zanotti, G, Angelini, A, Barison, N, Couturier, M, Stein, M.
Deposit date:2008-04-23
Release date:2008-12-30
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Helicobacter pylori CagD (HP0545, Cag24) protein is essential for CagA translocation and maximal induction of interleukin-8 secretion.
J.Mol.Biol., 386, 2009
2G3V
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BU of 2g3v by Molmil
Crystal structure of CagS (HP0534, Cag13) from Helicobacter pylori
Descriptor: (UNK)(UNK)(UNK)(UNK)(UNK)(MSE)(UNK), CAG pathogenicity island protein 13
Authors:Cendron, L, Tasca, E, Angelini, A, Seydel, A, Battistutta, R, Montecucco, C, Zanotti, G.
Deposit date:2006-02-21
Release date:2007-03-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of CagS from helicobacter pylori
To be Published
4OW6
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BU of 4ow6 by Molmil
Crystal structure of Diphtheria Toxin at acidic pH
Descriptor: Diphtheria toxin
Authors:Leka, O, Vallese, F, Pirazzini, M, Berto, P, Montecucco, C, Zanotti, G.
Deposit date:2014-01-31
Release date:2014-04-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Diphtheria toxin conformational switching at acidic pH.
Febs J., 281, 2014
4TSD
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BU of 4tsd by Molmil
Crystal structure of Helicobacter pylori HP1029
Descriptor: 1,2-ETHANEDIOL, HP1029, ZINC ION
Authors:Vallese, F, Percudani, R, Zanotti, G.
Deposit date:2014-06-18
Release date:2015-06-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The crystal structure of Helicobacter pylori HP1029 highlights the functional diversity of the sialic acid-related DUF386 family.
Febs J., 282, 2015
3CWY
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BU of 3cwy by Molmil
Structure of CagD from H. pylori pathogenicity island crystallized in the presence of Cu(II) ions
Descriptor: COPPER (II) ION, protein CagD
Authors:Cendron, L, Zanotti, G, Angelini, A, Barison, N, Couturier, M, Stein, M.
Deposit date:2008-04-23
Release date:2008-12-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The Helicobacter pylori CagD (HP0545, Cag24) protein is essential for CagA translocation and maximal induction of interleukin-8 secretion.
J.Mol.Biol., 386, 2009
5LFD
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BU of 5lfd by Molmil
Crystal structure of allantoin racemase from Pseudomonas fluorescens AllR
Descriptor: Allantoin racemase
Authors:Cendron, l, Zanotti, G, Percudani, R, Ramazzina, I, Puggioni, V, Maccacaro, E, Liuzzi, A, Secchi, A.
Deposit date:2016-07-01
Release date:2017-05-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Structure and Function of a Microbial Allantoin Racemase Reveal the Origin and Conservation of a Catalytic Mechanism.
Biochemistry, 55, 2016
5LG5
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BU of 5lg5 by Molmil
Crystal structure of allantoin racemase from Pseudomonas fluorescens AllR
Descriptor: Allantoin racemase
Authors:Cendron, l, Zanotti, G, Percudani, R, Ragazzina, I, Puggioni, V, Maccacaro, E, Liuzzi, A, Secchi, A.
Deposit date:2016-07-06
Release date:2017-05-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structure and Function of a Microbial Allantoin Racemase Reveal the Origin and Conservation of a Catalytic Mechanism.
Biochemistry, 55, 2016
1BOI
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BU of 1boi by Molmil
N-TERMINALLY TRUNCATED RHODANESE
Descriptor: RHODANESE
Authors:Gliubich, F, Berni, R, Cianci, M, Trevino, R.J, Horowitz, P.M, Zanotti, G.
Deposit date:1998-08-04
Release date:1999-04-27
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:NH2-terminal sequence truncation decreases the stability of bovine rhodanese, minimally perturbs its crystal structure, and enhances interaction with GroEL under native conditions.
J.Biol.Chem., 274, 1999
1BOH
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BU of 1boh by Molmil
SULFUR-SUBSTITUTED RHODANESE (ORTHORHOMBIC FORM)
Descriptor: RHODANESE
Authors:Gliubich, F, Berni, R, Cianci, M, Trevino, R.J, Horowitz, P.M, Zanotti, G.
Deposit date:1998-08-04
Release date:1999-04-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:NH2-terminal sequence truncation decreases the stability of bovine rhodanese, minimally perturbs its crystal structure, and enhances interaction with GroEL under native conditions.
J.Biol.Chem., 274, 1999
3Q1E
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BU of 3q1e by Molmil
Crystal structure of Y116T/I16A double mutant of 5-hydroxyisourate hydrolase in complex with T4
Descriptor: 3,5,3',5'-TETRAIODO-L-THYRONINE, 5-hydroxyisourate hydrolase
Authors:Cendron, L, Ramazzina, I, Percudani, R, Zanotti, G, Berni, R.
Deposit date:2010-12-17
Release date:2011-05-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Probing the evolution of hydroxyisourate hydrolase into transthyretin through active-site redesign.
J.Mol.Biol., 409, 2011
2PNC
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BU of 2pnc by Molmil
Crystal Structure of Bovine Plasma Copper-Containing Amine Oxidase in Complex with Clonidine
Descriptor: 2,6-DICHLORO-N-IMIDAZOLIDIN-2-YLIDENEANILINE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Cendron, L, Holt, A, Smith, D.J, Zanotti, G, Rigo, A, Di Paolo, M.L.
Deposit date:2007-04-24
Release date:2008-02-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Multiple binding sites for substrates and modulators of semicarbazide-sensitive amine oxidases: kinetic consequences
Mol.Pharmacol., 73, 2008
1TU5
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BU of 1tu5 by Molmil
Crystal structure of bovine plasma copper-containing amine oxidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Lunelli, M, Di Paolo, M.L, Biadene, M, Calderone, V, Scarpa, M, Battistutta, R, Rigo, A, Zanotti, G.
Deposit date:2004-06-24
Release date:2005-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystal structure of amine oxidase from bovine serum.
J.Mol.Biol., 346, 2005
3QN7
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BU of 3qn7 by Molmil
Potent and selective bicyclic peptide inhibitor (UK18) of human urokinase-type plasminogen activator(uPA)
Descriptor: 1,3,5-tris(bromomethyl)benzene, Bicyclic peptide inhibitor, Urokinase-type plasminogen activator
Authors:Angelini, A, Cendron, L, Touati, J, Winter, G, Zanotti, G, Heinis, C.
Deposit date:2011-02-08
Release date:2012-02-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Bicyclic peptide inhibitor reveals large contact interface with a protease target
Acs Chem.Biol., 7, 2012

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