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2JC4
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BU of 2jc4 by Molmil
3'-5' exonuclease (NExo) from Neisseria Meningitidis
Descriptor: ACETATE ION, DIHYDROGENPHOSPHATE ION, EXODEOXYRIBONUCLEASE III, ...
Authors:Carpenter, E.P, Corbett, A, Thomson, H, Adacha, J, Jensen, K, Bergeron, J, Kasampalidis, I, Exley, R, Winterbotham, M, Tang, C, Baldwin, G, Freemont, P.
Deposit date:2006-12-19
Release date:2007-03-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ap Endonuclease Paralogues with Distinct Activities in DNA Repair and Bacterial Pathogenesis.
Embo J., 26, 2007
2JC5
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BU of 2jc5 by Molmil
Apurinic Apyrimidinic (AP) endonuclease (NApe) from Neisseria Meningitidis
Descriptor: 1,4-DIETHYLENE DIOXIDE, BICINE, EXODEOXYRIBONUCLEASE, ...
Authors:Carpenter, E.P, Corbett, A, Thomson, H, Adacha, J, Jensen, K, Bergeron, J, Kasampalidis, I, Exley, R, Winterbotham, M, Tang, C, Baldwin, G.S, Freemont, P.
Deposit date:2006-12-19
Release date:2007-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Ap Endonuclease Paralogues with Distinct Activities in DNA Repair and Bacterial Pathogenesis.
Embo J., 26, 2007
2JPR
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BU of 2jpr by Molmil
Joint refinement of the HIV-1 CA-NTD in complex with the assembly inhibitor CAP-1
Descriptor: 1-(3-chloro-4-methylphenyl)-3-{2-[({5-[(dimethylamino)methyl]-2-furyl}methyl)thio]ethyl}urea, Gag-Pol polyprotein
Authors:Kelly, B.N, Kyere, S, Kinde, I, Tang, C, Howard, B.R, Robinson, H, Sundquist, W.I, Summers, M.F, Hill, C.P.
Deposit date:2007-05-22
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the Antiviral Assembly Inhibitor CAP-1 Complex with the HIV-1 CA Protein
J.Mol.Biol., 373, 2007
5XBO
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BU of 5xbo by Molmil
Lanthanoid tagging via an unnatural amino acid for protein structure characterization
Descriptor: Polyubiquitin-B, TERBIUM(III) ION, UV excision repair protein RAD23 homolog A
Authors:Jiang, W, Gu, X, Dong, X, Tang, C.
Deposit date:2017-03-21
Release date:2017-05-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Lanthanoid tagging via an unnatural amino acid for protein structure characterization
J. Biomol. NMR, 67, 2017
6KOX
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BU of 6kox by Molmil
Relaxed state of S65/T66 double-phosphorylated ubiquitin
Descriptor: Polyubiquitin-B
Authors:Dong, X, Tang, C.
Deposit date:2019-08-13
Release date:2019-08-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Ubiquitin is double-phosphorylated by PINK1 for enhanced pH-sensitivity of conformational switch.
Protein Cell, 10, 2019
6KOW
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BU of 6kow by Molmil
Retracted state of S65/T66 double-phosphorylated ubiquitin
Descriptor: Polyubiquitin-B
Authors:Dong, X, Tang, C.
Deposit date:2019-08-13
Release date:2019-08-28
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Ubiquitin is double-phosphorylated by PINK1 for enhanced pH-sensitivity of conformational switch.
Protein Cell, 10, 2019
5YMY
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BU of 5ymy by Molmil
The structure of the complex between Rpn13 and K48-diUb
Descriptor: Proteasomal ubiquitin receptor ADRM1, Ubiquitin
Authors:Liu, Z, Dong, X, Gong, Z, Yi, H.W, Liu, K, Yang, J, Zhang, W.P, Tang, C.
Deposit date:2017-10-22
Release date:2019-03-13
Last modified:2019-04-24
Method:SOLUTION NMR
Cite:Structural basis for the recognition of K48-linked Ub chain by proteasomal receptor Rpn13.
Cell Discov, 5, 2019
5YZ9
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BU of 5yz9 by Molmil
zinc finger domain of METTL3-METTL14 N6-methyladenosine methyltransferase
Descriptor: N6-adenosine-methyltransferase catalytic subunit, ZINC ION
Authors:Dong, X, Tang, C, Gong, Z, Yin, P, Huang, J.B.
Deposit date:2017-12-13
Release date:2018-03-28
Last modified:2024-05-01
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Solution structure of the RNA recognition domain of METTL3-METTL14 N6-methyladenosine methyltransferase.
Protein Cell, 10, 2019
5XK4
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BU of 5xk4 by Molmil
Retracted state of S65-phosphorylated ubiquitin
Descriptor: Polyubiquitin-B
Authors:Dong, X, Gong, Z, Qin, L.Y, Ran, M.L, Zhang, C.L, Liu, K, Liu, Z, Zhang, W.P, Tang, C.
Deposit date:2017-05-05
Release date:2017-06-28
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Ubiquitin S65 phosphorylation engenders a pH-sensitive conformational switch
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5XK5
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BU of 5xk5 by Molmil
Relaxed state of S65-phosphorylated ubiquitin
Descriptor: Polyubiquitin-B
Authors:Xu, D, Zhou, G, Qin, L.Y, Ran, M.L, Zhang, C.L, Liu, K, Liu, Z, Zhang, W.P, Tang, C.
Deposit date:2017-05-05
Release date:2017-06-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Ubiquitin S65 phosphorylation engenders a pH-sensitive conformational switch
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7YFJ
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BU of 7yfj by Molmil
Crystal structure of human WTAP
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Pre-mRNA-splicing regulator WTAP
Authors:Yan, X.H, Guan, Z.Y, Tang, C, Yin, P.
Deposit date:2022-07-08
Release date:2023-01-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:AI-empowered integrative structural characterization of m 6 A methyltransferase complex.
Cell Res., 32, 2022
7YG4
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BU of 7yg4 by Molmil
Structure of WTAP-VIRMA in the m6A writer complex
Descriptor: Pre-mRNA-splicing regulator WTAP, Protein virilizer homolog
Authors:Yan, X.H, Guan, Z.Y, Tang, C, Yin, P.
Deposit date:2022-07-11
Release date:2022-11-23
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:AI-empowered integrative structural characterization of m 6 A methyltransferase complex.
Cell Res., 32, 2022
6ZUO
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BU of 6zuo by Molmil
Human RIO1(kd)-StHA late pre-40S particle, structural state A (pre 18S rRNA cleavage)
Descriptor: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Plassart, L, Shayan, R, Plisson-Chastang, C.
Deposit date:2020-07-23
Release date:2021-05-12
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The final step of 40S ribosomal subunit maturation is controlled by a dual key lock.
Elife, 10, 2021
6ZV6
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BU of 6zv6 by Molmil
Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Plassart, L, Shayan, R, Plisson-Chastang, C.
Deposit date:2020-07-24
Release date:2021-05-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The final step of 40S ribosomal subunit maturation is controlled by a dual key lock.
Elife, 10, 2021
6RBD
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BU of 6rbd by Molmil
State 1 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles
Descriptor: 20S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Shayan, R, Mitterer, V, Ferreira-Cerca, S, Murat, G, Enne, T, Rinaldi, D, Weigl, S, Omanic, H, Gleizes, P.E, Kressler, D, Pertschy, B, Plisson-Chastang, C.
Deposit date:2019-04-10
Release date:2019-06-26
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Conformational proofreading of distant 40S ribosomal subunit maturation events by a long-range communication mechanism.
Nat Commun, 10, 2019
6RBE
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BU of 6rbe by Molmil
State 2 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Shayan, R, Mitterer, V, Ferreira-Cerca, S, Murat, G, Enne, T, Rinaldi, D, Weigl, S, Omanic, H, Gleizes, P.E, Kressler, D, Pertschy, B, Plisson-Chastang, C.
Deposit date:2019-04-10
Release date:2019-06-26
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Conformational proofreading of distant 40S ribosomal subunit maturation events by a long-range communication mechanism.
Nat Commun, 10, 2019
6Y7C
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BU of 6y7c by Molmil
Early cytoplasmic yeast pre-40S particle (purified with Tsr1 as bait)
Descriptor: 20S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Shayan, R, Plassart, L, Plisson-Chastang, C.
Deposit date:2020-02-28
Release date:2020-03-18
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Good Vibrations: Structural Remodeling of Maturing Yeast Pre-40S Ribosomal Particles Followed by Cryo-Electron Microscopy.
Molecules, 25, 2020
5EGF
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BU of 5egf by Molmil
The crystal structure of SeMet-CT
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-ETHANEDIOL, TqaA
Authors:Zhang, J.R, Tang, Y, Zhou, J.H.
Deposit date:2015-10-27
Release date:2016-10-19
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural basis of nonribosomal peptide macrocyclization in fungi
Nat.Chem.Biol., 12, 2016
5EJD
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BU of 5ejd by Molmil
The crystal structure of holo T3CT
Descriptor: 4'-PHOSPHOPANTETHEINE, GLYCEROL, TqaA
Authors:Zhang, J.R, Tang, Y, Zhou, J.H.
Deposit date:2015-11-01
Release date:2016-10-19
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural basis of nonribosomal peptide macrocyclization in fungi
Nat.Chem.Biol., 12, 2016
6PM9
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BU of 6pm9 by Molmil
Crystal structure of the core catalytic domain of human O-GlcNAcase bound to MK-8719
Descriptor: (3aR,5S,6S,7R,7aR)-5-(difluoromethyl)-2-(ethylamino)-5,6,7,7a-tetrahydro-3aH-pyrano[3,2-d][1,3]thiazole-6,7-diol, O-GlcNAcase TIM-barrel domain, O-GlcNAcase stalk domain
Authors:Klein, D.J, Selnick, H.G, Duffy, J.L, McEachern, E.J.
Deposit date:2019-07-01
Release date:2019-09-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Discovery of MK-8719, a Potent O-GlcNAcase Inhibitor as a Potential Treatment for Tauopathies.
J.Med.Chem., 62, 2019
5DIJ
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BU of 5dij by Molmil
The crystal structure of CT
Descriptor: CHLORIDE ION, GLYCEROL, TqaA
Authors:Zhang, J.R, Tang, Y, Zhou, J.H.
Deposit date:2015-09-01
Release date:2016-09-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of nonribosomal peptide macrocyclization in fungi
Nat.Chem.Biol., 12, 2016
5DLK
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BU of 5dlk by Molmil
The crystal structure of CT mutant
Descriptor: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, TqaA
Authors:Zhang, J.R, Tang, Y, Zhou, J.H.
Deposit date:2015-09-06
Release date:2016-09-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of nonribosomal peptide macrocyclization in fungi
Nat.Chem.Biol., 12, 2016
6A58
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BU of 6a58 by Molmil
Structure of histone demethylase REF6
Descriptor: Lysine-specific demethylase REF6, ZINC ION
Authors:Tian, Z, Chen, Z.
Deposit date:2018-06-22
Release date:2019-06-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal structures of REF6 and its complex with DNA reveal diverse recognition mechanisms.
Cell Discov, 6, 2020
6A57
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BU of 6a57 by Molmil
Structure of histone demethylase REF6 complexed with DNA
Descriptor: DNA (5'-D(*CP*TP*TP*TP*CP*TP*CP*TP*GP*TP*TP*TP*TP*GP*TP*C)-3'), DNA (5'-D(*GP*GP*AP*CP*AP*AP*AP*AP*CP*AP*GP*AP*GP*AP*AP*A)-3'), GLYCEROL, ...
Authors:Tian, Z, Chen, Z.
Deposit date:2018-06-22
Release date:2019-06-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of REF6 and its complex with DNA reveal diverse recognition mechanisms.
Cell Discov, 6, 2020
1MX8
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BU of 1mx8 by Molmil
Two homologous rat cellular retinol-binding proteins differ in local structure and flexibility
Descriptor: CELLULAR RETINOL-BINDING PROTEIN I, HOLO, RETINOL
Authors:Lu, J, Cistola, D.P, Li, E.
Deposit date:2002-10-01
Release date:2003-07-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Two homologous rat cellular retinol-binding proteins differ in local conformational flexibility.
J.Mol.Biol., 330, 2003

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