1AH9
 
 | | THE STRUCTURE OF THE TRANSLATIONAL INITIATION FACTOR IF1 FROM ESCHERICHIA COLI, NMR, 19 STRUCTURES | | Descriptor: | INITIATION FACTOR 1 | | Authors: | Sette, M, Van Tilborg, P, Spurio, R, Kaptein, R, Paci, M, Gualerzi, C.O, Boelens, R. | | Deposit date: | 1997-04-16 | | Release date: | 1997-07-07 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | The structure of the translational initiation factor IF1 from E.coli contains an oligomer-binding motif.
EMBO J., 16, 1997
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2LYH
 | | Structure of Faap24 residues 141-215 | | Descriptor: | Fanconi anemia-associated protein of 24 kDa | | Authors: | Wienk, H, Slootweg, J, Kaptein, R, Boelens, R, Folkers, G.E. | | Deposit date: | 2012-09-18 | | Release date: | 2013-05-01 | | Last modified: | 2024-05-01 | | Method: | SOLUTION NMR | | Cite: | The Fanconi anemia associated protein FAAP24 uses two substrate specific binding surfaces for DNA recognition.
Nucleic Acids Res., 41, 2013
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2NBG
 | | Structure of the Geobacillus stearothermophilus IF2 G3-subdomain | | Descriptor: | Translation initiation factor IF-2 | | Authors: | Dongre, R, Folkers, G.E, Gualerzi, C.O, Boelens, R, Wienk, H. | | Deposit date: | 2016-02-11 | | Release date: | 2016-07-20 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | A model for the interaction of the G3-subdomain of Geobacillus stearothermophilus IF2 with the 30S ribosomal subunit.
Protein Sci., 25, 2016
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2PHE
 | | Model for VP16 binding to PC4 | | Descriptor: | Alpha trans-inducing protein, TRANSCRIPTIONAL COACTIVATOR PC4 | | Authors: | Jonker, H.R.A, Wechselberger, R.W, Boelens, R, Folkers, G.E, Kaptein, R. | | Deposit date: | 2007-04-11 | | Release date: | 2007-04-24 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Structural Properties of the Promiscuous VP16 Activation Domain
Biochemistry, 44, 2005
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2PHG
 | | Model for VP16 binding to TFIIB | | Descriptor: | Alpha trans-inducing protein, Transcription initiation factor IIB | | Authors: | Jonker, H.R.A, Wechselberger, R.W, Boelens, R, Folkers, G.E, Kaptein, R. | | Deposit date: | 2007-04-11 | | Release date: | 2007-04-24 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Structural Properties of the Promiscuous VP16 Activation Domain
Biochemistry, 44, 2005
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2MUT
 | | Solution structure of the F231L mutant ERCC1-XPF dimerization region | | Descriptor: | DNA excision repair protein ERCC-1, DNA repair endonuclease XPF | | Authors: | Faridounnia, M, Wienk, H, Kovacic, L, Folkers, G.E, Jaspers, N.G.J, Kaptein, R, Hoeijmakers, J.H.J, Boelens, R. | | Deposit date: | 2014-09-17 | | Release date: | 2015-06-24 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | The Cerebro-oculo-facio-skeletal Syndrome Point Mutation F231L in the ERCC1 DNA Repair Protein Causes Dissociation of the ERCC1-XPF Complex.
J.Biol.Chem., 290, 2015
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1B28
 | | ARC REPRESSOR MYL MUTANT FROM SALMONELLA BACTERIOPHAGE P22 | | Descriptor: | PROTEIN (REGULATORY PROTEIN ARC) | | Authors: | Rietveld, A.W.M, Nooren, I.M.A, Sauer, R.T, Kaptein, R, Boelens, R. | | Deposit date: | 1998-12-05 | | Release date: | 1999-11-03 | | Last modified: | 2023-12-27 | | Method: | SOLUTION NMR | | Cite: | The solution structure and dynamics of an Arc repressor mutant reveal premelting conformational changes related to DNA binding.
Biochemistry, 38, 1999
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1BRV
 | | SOLUTION NMR STRUCTURE OF THE IMMUNODOMINANT REGION OF PROTEIN G OF BOVINE RESPIRATORY SYNCYTIAL VIRUS, 48 STRUCTURES | | Descriptor: | PROTEIN G | | Authors: | Doreleijers, J.F, Langedijk, J.P.M, Hard, K, Rullmann, J.A.C, Boelens, R, Schaaper, W.M, Van Oirschot, J.T, Kaptein, R. | | Deposit date: | 1996-03-29 | | Release date: | 1997-06-05 | | Last modified: | 2017-11-29 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the immunodominant region of protein G of bovine respiratory syncytial virus.
Biochemistry, 35, 1996
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2KEK
 | | Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O3 | | Descriptor: | DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*GP*AP*GP*CP*GP*CP*AP*AP*CP*GP*CP*AP*AP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*TP*TP*GP*CP*GP*TP*TP*GP*CP*GP*CP*TP*CP*AP*CP*TP*GP*CP*CP*G)-3'), Lactose operon repressor | | Authors: | Romanuka, J, Folkers, G, Biris, N, Tishchenko, E, Wienk, H, Kaptein, R, Boelens, R. | | Deposit date: | 2009-01-30 | | Release date: | 2009-05-19 | | Last modified: | 2021-10-20 | | Method: | SOLUTION NMR | | Cite: | Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
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2KEI
 | | Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1 | | Descriptor: | DNA (5'-D(*GP*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*GP*GP*AP*TP*AP*AP*CP*AP*AP*TP*TP*T)-3'), DNA (5'-D(P*AP*AP*AP*TP*TP*GP*TP*TP*AP*TP*CP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*TP*C)-3'), Lactose operon repressor | | Authors: | Romanuka, J, Folkers, G, Biris, N, Tishchenko, E, Wienk, H, Kaptein, R, Boelens, R. | | Deposit date: | 2009-01-30 | | Release date: | 2009-05-19 | | Last modified: | 2021-10-20 | | Method: | SOLUTION NMR | | Cite: | Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
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2KEJ
 | | Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O2 | | Descriptor: | DNA (5'-D(*GP*AP*AP*AP*TP*GP*TP*GP*AP*GP*CP*GP*AP*GP*TP*AP*AP*CP*AP*AP*CP*CP*G)-3'), DNA (5'-D(P*CP*GP*GP*TP*TP*GP*TP*TP*AP*CP*TP*CP*GP*CP*TP*CP*AP*CP*AP*TP*TP*TP*C)-3'), Lactose operon repressor | | Authors: | Romanuka, J, Folkers, G, Biris, N, Tishchenko, E, Wienk, H, Kaptein, R, Boelens, R. | | Deposit date: | 2009-01-30 | | Release date: | 2009-05-19 | | Last modified: | 2021-10-20 | | Method: | SOLUTION NMR | | Cite: | Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
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2LKC
 | | Free B.st IF2-G2 | | Descriptor: | Translation initiation factor IF-2 | | Authors: | Wienk, H, Tishchenko, E, Belardinelli, R, Tomaselli, S, Dongre, R, Spurio, R, Folkers, G.E, Gualerzi, C.O, Boelens, R. | | Deposit date: | 2011-10-10 | | Release date: | 2012-02-15 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | Structural Dynamics of Bacterial Translation Initiation Factor IF2.
J.Biol.Chem., 287, 2012
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2JPD
 | | Solution structure of the ERCC1 central domain | | Descriptor: | DNA excision repair protein ERCC-1 | | Authors: | Tripsianes, K, Folkers, G, Zheng, C, Das, D, Grinstead, J.S, Kaptein, R, Boelens, R. | | Deposit date: | 2007-05-06 | | Release date: | 2007-09-04 | | Last modified: | 2024-05-08 | | Method: | SOLUTION NMR | | Cite: | Analysis of the XPA and ssDNA-binding surfaces on the central domain of human ERCC1 reveals evidence for subfunctionalization
Nucleic Acids Res., 35, 2007
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2KN7
 | | Structure of the XPF-single strand DNA complex | | Descriptor: | DNA (5'-D(*CP*AP*GP*TP*GP*GP*CP*TP*GP*A)-3'), DNA repair endonuclease XPF | | Authors: | Das, D, Folkers, G.E, van Dijk, M, Jaspers, N.G.J, Hoeijmakers, J.H.J, Kaptein, R, Boelens, R. | | Deposit date: | 2009-08-16 | | Release date: | 2010-08-04 | | Last modified: | 2024-05-01 | | Method: | SOLUTION NMR | | Cite: | The structure of the XPF-ssDNA complex underscores the distinct roles of the XPF and ERCC1 helix- hairpin-helix domains in ss/ds DNA recognition
Structure, 20, 2012
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2MH3
 | | NMR structure of the basic helix-loop-helix region of the transcriptional repressor HES-1 | | Descriptor: | Transcription factor HES-1 | | Authors: | Wienk, H, Popovic, M, Coglievina, M, Boelens, R, Pongor, S, Pintar, A. | | Deposit date: | 2013-11-15 | | Release date: | 2014-02-05 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | The basic helix-loop-helix region of the transcriptional repressor hairy and enhancer of split 1 is preorganized to bind DNA.
Proteins, 82, 2014
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2N01
 | | NMR structure of VirB9 C-terminal domain in complex with VirB7 N-terminal domain from Xanthomonas citri's T4SS | | Descriptor: | VirB7 protein, VirB9 protein | | Authors: | Oliveira, L.C, Souza, D.P, Salinas, R.K, Wienk, H, Boelens, R, Farah, S.C. | | Deposit date: | 2015-03-03 | | Release date: | 2015-09-09 | | Last modified: | 2024-05-01 | | Method: | SOLUTION NMR | | Cite: | VirB7 and VirB9 Interactions Are Required for the Assembly and Antibacterial Activity of a Type IV Secretion System.
Structure, 24, 2016
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1DZ7
 | | Solution structure of the a-subunit of human chorionic gonadotropin [modeled without carbohydrate residues] | | Descriptor: | CHORIONIC GONADOTROPIN | | Authors: | Erbel, P.J.A, Karimi-Nejad, Y, De Beer, T, Boelens, R, Kamerling, J.P, Vliegenthart, J.F.G. | | Deposit date: | 2000-02-18 | | Release date: | 2000-02-29 | | Last modified: | 2019-10-09 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the alpha-subunit of human chorionic gonadotropin.
Eur.J.Biochem., 260, 1999
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1E9J
 | | SOLUTION STRUCTURE OF THE A-SUBUNIT OF HUMAN CHORIONIC GONADOTROPIN [INCLUDING A SINGLE GLCNAC RESIDUE AT ASN52 AND ASN78] | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CHORIONIC GONADOTROPIN | | Authors: | Erbel, P.J.A, Karimi-Nejad, Y, van Kuik, J.A, Boelens, R, Kamerling, J.P, Vliegenthart, J.F.G. | | Deposit date: | 2000-10-18 | | Release date: | 2002-07-25 | | Last modified: | 2020-07-29 | | Method: | SOLUTION NMR | | Cite: | Effects of the N-linked glycans on the 3D structure of the free alpha-subunit of human chorionic gonadotropin.
Biochemistry, 39, 2000
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1E4U
 | | N-terminal RING finger domain of human NOT-4 | | Descriptor: | TRANSCRIPTIONAL REPRESSOR NOT4, ZINC ION | | Authors: | Hanzawa, H, De Ruwe, M.J, Albert, T.K, Van Der Vliet, P.C, Timmers, H.T, Boelens, R. | | Deposit date: | 2000-07-12 | | Release date: | 2001-03-31 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | The Structure of the C4C4 Ring Finger of Human not4 Reveals Features Distinct from Those of C3Hc4 Ring Fingers
J.Biol.Chem., 276, 2001
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2K27
 | | Solution structure of Human Pax8 Paired Box Domain | | Descriptor: | Paired box protein Pax-8 | | Authors: | Codutti, L, Esposito, G, Corazza, A, Fogolari, F, Tell, G, Vascotto, C, van Ingen, H, Boelens, R, Viglino, P, Quadrifoglio, F. | | Deposit date: | 2008-03-26 | | Release date: | 2008-09-30 | | Last modified: | 2024-05-08 | | Method: | SOLUTION NMR | | Cite: | The Solution Structure of DNA-free Pax-8 Paired Box Domain Accounts for Redox Regulation of Transcriptional Activity in the Pax Protein Family.
J.Biol.Chem., 283, 2008
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2K16
 | | Solution structure of the free TAF3 PHD domain | | Descriptor: | Transcription initiation factor TFIID subunit 3, ZINC ION | | Authors: | van Ingen, H, van Schaik, F.M.A, Wienk, H, Timmers, M, Boelens, R. | | Deposit date: | 2008-02-22 | | Release date: | 2008-07-15 | | Last modified: | 2024-05-08 | | Method: | SOLUTION NMR | | Cite: | Recognition of the H3K4me3 mark by the TAF3-PHD finger
To be Published
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2K17
 | | Solution structure of the TAF3 PHD domain in complex with a H3K4me3 peptide | | Descriptor: | H3K4me3 peptide, Transcription initiation factor TFIID subunit 3, ZINC ION | | Authors: | van Ingen, H, van Schaik, F.M.A, Wienk, H, Timmers, M, Boelens, R. | | Deposit date: | 2008-02-22 | | Release date: | 2008-07-15 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | Recognition of the H3K4me3 mark by the TAF3-PHD finger
To be Published
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2K4D
 | | E2-c-Cbl recognition is necessary but not sufficient for ubiquitination activity | | Descriptor: | E3 ubiquitin-protein ligase CBL, ZINC ION | | Authors: | Huang, A, De Jong, R.N, Wienk, H, Winkler, S.G, Timmers, H.T.M, Boelens, R. | | Deposit date: | 2008-06-06 | | Release date: | 2009-01-20 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | E2-c-Cbl recognition is necessary but not sufficient for ubiquitination activity
J.Mol.Biol., 385, 2009
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2KXI
 | | Solution NMR structure of the apoform of NarE (NMB1343) | | Descriptor: | Uncharacterized protein | | Authors: | Koehler, C, Carlier, L, Veggi, D, Soriani, M, Pizza, M, Boelens, R, Bonvin, A.M.J.J. | | Deposit date: | 2010-05-06 | | Release date: | 2011-03-02 | | Last modified: | 2018-08-08 | | Method: | SOLUTION NMR | | Cite: | Solution NMR structure of the apoform of NarE (NMB1343)
To be Published
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1GDC
 | | REFINED SOLUTION STRUCTURE OF THE GLUCOCORTICOID RECEPTOR DNA-BINDING DOMAIN | | Descriptor: | GLUCOCORTICOID RECEPTOR, ZINC ION | | Authors: | Baumann, H, Paulsen, K, Kovacs, H, Berglund, H, Wright, A.P.H, Gustafsson, J.-A, Hard, T. | | Deposit date: | 1994-03-15 | | Release date: | 1994-06-22 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Refined solution structure of the glucocorticoid receptor DNA-binding domain.
Biochemistry, 32, 1993
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