Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1KAR
DownloadVisualize
BU of 1kar by Molmil
L-HISTIDINOL DEHYDROGENASE (HISD) STRUCTURE COMPLEXED WITH HISTAMINE (INHIBITOR), ZINC AND NAD (COFACTOR)
Descriptor: HISTAMINE, Histidinol dehydrogenase, ZINC ION
Authors:Barbosa, J.A.R.G, Sivaraman, J, Li, Y, Larocque, R, Matte, A, Schrag, J.D, Cygler, M.
Deposit date:2001-11-02
Release date:2002-06-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of action and NAD+-binding mode revealed by the crystal structure of L-histidinol dehydrogenase.
Proc.Natl.Acad.Sci.USA, 99, 2002
4NFC
DownloadVisualize
BU of 4nfc by Molmil
Structure of paired immunoglobulin-like type 2 receptor (PILR )
Descriptor: Paired immunoglobulin-like type 2 receptor beta
Authors:Lu, Q, Lu, G, Qi, J, Li, Y, Zhang, Y, Wang, H, Fan, Z, Yan, J, Gao, G.F.
Deposit date:2013-10-31
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:PILR alpha and PILR beta have a siglec fold and provide the basis of binding to sialic acid
Proc.Natl.Acad.Sci.USA, 111, 2014
1K6M
DownloadVisualize
BU of 1k6m by Molmil
Crystal Structure of Human Liver 6-Phosphofructo-2-Kinase/Fructose-2,6-Bisphosphatase
Descriptor: 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2-phosphatase, PHOSPHATE ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Lee, Y.H, Li, Y, Uyeda, K, Hasemann, C.A.
Deposit date:2001-10-16
Release date:2002-12-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Tissue-specific structure/function differentiation of the liver isoform of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase.
J.Biol.Chem., 278, 2003
5CZ3
DownloadVisualize
BU of 5cz3 by Molmil
Crystal Structure of Myxoma Virus M64
Descriptor: BETA-MERCAPTOETHANOL, M64R
Authors:Krumm, B.E, Meng, X, Li, Y, Xiang, Y, Deng, J.
Deposit date:2015-07-31
Release date:2015-11-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for antagonizing a host restriction factor by C7 family of poxvirus host-range proteins.
Proc.Natl.Acad.Sci.USA, 112, 2015
5CYW
DownloadVisualize
BU of 5cyw by Molmil
Crystal Structure of Vaccinia Virus C7
Descriptor: GLYCEROL, Interferon antagonist C7
Authors:Krumm, B.E, Meng, X, Li, Y, Xiang, Y, Deng, J.
Deposit date:2015-07-30
Release date:2015-11-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for antagonizing a host restriction factor by C7 family of poxvirus host-range proteins.
Proc.Natl.Acad.Sci.USA, 112, 2015
1N3B
DownloadVisualize
BU of 1n3b by Molmil
Crystal Structure of Dephosphocoenzyme A kinase from Escherichia coli
Descriptor: Dephospho-CoA kinase, SULFATE ION
Authors:O'Toole, N, Barbosa, J.A.R.G, Li, Y, Hung, L.-W, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2002-10-25
Release date:2003-01-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of a Trimeric Form of Dephosphocoenzyme A Kinase from Escherichia coli
Protein Sci., 12, 2003
1G91
DownloadVisualize
BU of 1g91 by Molmil
SOLUTION STRUCTURE OF MYELOID PROGENITOR INHIBITORY FACTOR-1 (MPIF-1)
Descriptor: MYELOID PROGENITOR INHIBITORY FACTOR-1
Authors:Rajarathnam, K, Li, Y, Rohrer, T, Gentz, R.
Deposit date:2000-11-21
Release date:2001-03-07
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Solution structure and dynamics of myeloid progenitor inhibitory factor-1 (MPIF-1), a novel monomeric CC chemokine.
J.Biol.Chem., 276, 2001
4WMH
DownloadVisualize
BU of 4wmh by Molmil
Structure of heme oxygenase-2 containing residues 1-288 lacking the membrane spanning region
Descriptor: CHLORIDE ION, Heme oxygenase 2
Authors:Bianchetti, C.M, Li, Y, Ragsdale, S.W, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2014-10-09
Release date:2014-11-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of heme oxygenase-2 containing residues 1-288 lacking the membrane spanning region
To Be Published
4XCX
DownloadVisualize
BU of 4xcx by Molmil
METHYLTRANSFERASE DOMAIN OF SMALL RNA 2'-O-METHYLTRANSFERASE
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, Small RNA 2'-O-methyltransferase
Authors:Walker, J.R, Zeng, H, Dong, A, Li, Y, Wernimont, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2014-12-18
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Crystal structure of human C1ORF59 in complex with SAH
To be published
4Y29
DownloadVisualize
BU of 4y29 by Molmil
Identification of a novel PPARg ligand that regulates metabolism
Descriptor: 1,2-dimethoxy-12-methyl[1,3]benzodioxolo[5,6-c]phenanthridin-12-ium, Peptide from Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma
Authors:Wang, R, Li, Y.
Deposit date:2015-02-09
Release date:2015-09-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Selective targeting of PPAR gamma by the natural product chelerythrine with a unique binding mode and improved antidiabetic potency.
Sci Rep, 5, 2015
7KA3
DownloadVisualize
BU of 7ka3 by Molmil
Aldolase, rabbit muscle (beam-tilt refinement x3)
Descriptor: Fructose-bisphosphate aldolase A
Authors:Kearns, S.K, Cash, J.N, Cianfrocco, M.A, Li, Y.
Deposit date:2020-09-29
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:High-resolution cryo-EM using beam-image shift at 200 keV.
Iucrj, 7, 2020
4YL8
DownloadVisualize
BU of 4yl8 by Molmil
Crystal structure of the Crumbs/Moesin complex
Descriptor: GLYCEROL, IODIDE ION, Moesin, ...
Authors:Wei, Z, Li, Y, Zhang, M.
Deposit date:2015-03-05
Release date:2015-04-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Basis for the Phosphorylation-regulated Interaction between the Cytoplasmic Tail of Cell Polarity Protein Crumbs and the Actin-binding Protein Moesin
J.Biol.Chem., 290, 2015
7KA2
DownloadVisualize
BU of 7ka2 by Molmil
Aldolase, rabbit muscle (beam-tilt refinement x2)
Descriptor: Fructose-bisphosphate aldolase A
Authors:Kearns, S.K, Cash, J.N, Cianfrocco, M.A, Li, Y.
Deposit date:2020-09-29
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution cryo-EM using beam-image shift at 200 keV.
Iucrj, 7, 2020
7KEU
DownloadVisualize
BU of 7keu by Molmil
Cryo-EM structure of the Caspase-1-CARD:ASC-CARD octamer
Descriptor: Apoptosis-associated speck-like protein containing a CARD, Caspase-1
Authors:Hollingsworth, L.R, David, L, Li, Y, Ruan, J, Wu, H.
Deposit date:2020-10-12
Release date:2020-11-25
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Mechanism of filament formation in UPA-promoted CARD8 and NLRP1 inflammasomes.
Nat Commun, 12, 2021
4YVD
DownloadVisualize
BU of 4yvd by Molmil
Crytsal structure of human Pleiotropic Regulator 1 (PRL1)
Descriptor: CHLORIDE ION, Pleiotropic regulator 1, SODIUM ION, ...
Authors:Dong, A, Zeng, H, Xu, C, Tempel, W, Li, Y, He, H, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Min, J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2015-03-19
Release date:2015-04-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crytsal structure of human Pleiotropic Regulator 1 (PRL1).
to be published
7KQQ
DownloadVisualize
BU of 7kqq by Molmil
Crystal structure of human WDR55
Descriptor: UNKNOWN ATOM OR ION, WD repeat-containing protein 55
Authors:Zeng, H, Hutchinson, A, Li, Y, Seitova, A, Edwards, A.M, Arrowsmith, C.H, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2020-11-17
Release date:2020-12-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of human WDR55
To Be Published
7KA4
DownloadVisualize
BU of 7ka4 by Molmil
Aldolase, rabbit muscle (beam-tilt refinement x4)
Descriptor: Fructose-bisphosphate aldolase A
Authors:Kearns, S.K, Cash, J.N, Cianfrocco, M.A, Li, Y.
Deposit date:2020-09-29
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:High-resolution cryo-EM using beam-image shift at 200 keV.
Iucrj, 7, 2020
7JKX
DownloadVisualize
BU of 7jkx by Molmil
Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with YF3-6
Descriptor: Bromodomain-containing protein 4, N-{1-[1,1-di(pyridin-2-yl)ethyl]-6-[1-methyl-5-(methylamino)-6-oxo-1,6-dihydropyridin-3-yl]-1H-indol-4-yl}ethanesulfonamide
Authors:Ratia, K.M, Xiong, R, Li, Y, Shen, Z, Zhao, J, Huang, F, Dubrovyskyii, O, Thatcher, G.R.
Deposit date:2020-07-29
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with YF3-6
To Be Published
7K9L
DownloadVisualize
BU of 7k9l by Molmil
Aldolase, rabbit muscle (no beam-tilt refinement)
Descriptor: Fructose-bisphosphate aldolase A
Authors:Cianfrocco, M.A, Kearns, S.E, Cash, J.N, Li, Y.
Deposit date:2020-09-29
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:High-resolution cryo-EM using beam-image shift at 200 keV.
Iucrj, 7, 2020
6IZT
DownloadVisualize
BU of 6izt by Molmil
Crystal structure of Haemophilus Influenzae BamA POTRA3-5
Descriptor: Outer membrane protein assembly factor BamA
Authors:Ma, X, Wang, Q, Li, Y, Tan, P, Wu, H, Wang, P, Dong, X, Hong, L, Meng, G.
Deposit date:2018-12-20
Release date:2019-10-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:How BamA recruits OMP substratesviapoly-POTRAs domain.
Faseb J., 33, 2019
6IZS
DownloadVisualize
BU of 6izs by Molmil
Crystal structure of Haemophilus influenzae BamA POTRA4
Descriptor: Outer membrane protein assembly factor BamA
Authors:Ma, X, Wang, Q, Li, Y, Tan, P, Wu, H, Wang, P, Dong, X, Hong, L, Meng, G.
Deposit date:2018-12-20
Release date:2019-10-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:How BamA recruits OMP substratesviapoly-POTRAs domain.
Faseb J., 33, 2019
1Q18
DownloadVisualize
BU of 1q18 by Molmil
Crystal structure of E.coli glucokinase (Glk)
Descriptor: Glucokinase
Authors:Lunin, V.V, Li, Y, Schrag, J.D, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2003-07-18
Release date:2004-07-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Crystal structures of Escherichia coli ATP-dependent glucokinase and its complex with glucose.
J.Bacteriol., 186, 2004
1P9N
DownloadVisualize
BU of 1p9n by Molmil
Crystal structure of Escherichia coli MobB.
Descriptor: Molybdopterin-guanine dinucleotide biosynthesis protein B, SULFATE ION
Authors:Rangarajan, S.E, Tocilj, A, Li, Y, Iannuzzi, P, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2003-05-12
Release date:2003-05-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecules of Escherichia coli MobB assemble into densely packed hollow cylinders in a crystal lattice with 75% solvent content.
Acta Crystallogr.,Sect.D, 59, 2003
6J09
DownloadVisualize
BU of 6j09 by Molmil
Crystal structure of Haemophilus Influenzae BamA POTRA1-4
Descriptor: Outer membrane protein assembly factor BamA
Authors:Ma, X, Wang, Q, Li, Y, Tan, P, Wu, H, Wang, P, Dong, X, Hong, L, Meng, G.
Deposit date:2018-12-21
Release date:2019-10-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:How BamA recruits OMP substratesviapoly-POTRAs domain.
Faseb J., 33, 2019
1RW9
DownloadVisualize
BU of 1rw9 by Molmil
Crystal structure of the Arthrobacter aurescens chondroitin AC lyase
Descriptor: PHOSPHATE ION, SODIUM ION, chondroitin AC lyase
Authors:Lunin, V.V, Li, Y, Linhardt, R.J, Miyazono, H, Kyogashima, M, Kaneko, T, Bell, A.W, Cygler, M.
Deposit date:2003-12-16
Release date:2004-04-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:High-resolution crystal structure of Arthrobacter aurescens chondroitin AC lyase: an enzyme-substrate complex defines the catalytic mechanism
J.Mol.Biol., 337, 2004

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon