Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3QC8
DownloadVisualize
BU of 3qc8 by Molmil
Crystal Structure of FAF1 UBX Domain In Complex with p97/VCP N Domain Reveals The Conserved FcisP Touch-Turn Motif of UBX Domain Suffering Conformational Change
Descriptor: FAS-associated factor 1, Transitional endoplasmic reticulum ATPase
Authors:Kim, K.H, Kang, W, Suh, S.W, Yang, J.K.
Deposit date:2011-01-15
Release date:2011-07-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of FAF1 UBX domain in complex with p97/VCP N domain reveals a conformational change in the conserved FcisP touch-turn motif of UBX domain
Proteins, 79, 2011
3QCA
DownloadVisualize
BU of 3qca by Molmil
Crystal Structure of FAF1 UBX Domain In Complex with p97/VCP N Domain Reveals The Conserved FcisP Touch-Turn Motif of UBX Domain Suffering Conformational Change
Descriptor: FAS-associated factor 1
Authors:Kim, K.H, Kang, W, Suh, S.W, Yang, J.K.
Deposit date:2011-01-15
Release date:2011-05-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of human FAF1 UBX domain reveals a novel FcisP touch-turn motif in p97/VCP-binding region
Biochem.Biophys.Res.Commun., 407, 2011
3NX2
DownloadVisualize
BU of 3nx2 by Molmil
Enterobacter sp. Px6-4 Ferulic Acid Decarboxylase in complex with substrate analogues
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, Ferulic acid decarboxylase
Authors:Gu, W, Yang, J.K, Lou, Z.Y, Meng, Z.H, Zhang, K.-Q.
Deposit date:2010-07-12
Release date:2011-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural Basis of Enzymatic Activity for the Ferulic Acid Decarboxylase (FADase) from Enterobacter sp. Px6-4
Plos One, 6, 2011
3NX1
DownloadVisualize
BU of 3nx1 by Molmil
Crystal structure of Enterobacter sp. Px6-4 Ferulic Acid Decarboxylase
Descriptor: Ferulic acid decarboxylase
Authors:Gu, W, Yang, J.K, Lou, Z.Y, Meng, Z.H, Zhang, K.-Q.
Deposit date:2010-07-12
Release date:2011-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis of Enzymatic Activity for the Ferulic Acid Decarboxylase (FADase) from Enterobacter sp. Px6-4
Plos One, 6, 2011
4M6R
DownloadVisualize
BU of 4m6r by Molmil
Structural and biochemical basis for the inhibition of cell death by APIP, a methionine salvage enzyme
Descriptor: Methylthioribulose-1-phosphate dehydratase, ZINC ION
Authors:Kang, W, Hong, S.H, Lee, H.M, Kim, N.Y, Lim, Y.C, Le, L.T.M, Lim, B, Kim, H.C, Kim, T.Y, Ashida, H, Yokota, A, Hah, S.S, Chun, K.H, Jung, Y.K, Yang, J.K.
Deposit date:2013-08-10
Release date:2014-01-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and biochemical basis for the inhibition of cell death by APIP, a methionine salvage enzyme.
Proc.Natl.Acad.Sci.USA, 111, 2014
1DGS
DownloadVisualize
BU of 1dgs by Molmil
CRYSTAL STRUCTURE OF NAD+-DEPENDENT DNA LIGASE FROM T. FILIFORMIS
Descriptor: ADENOSINE MONOPHOSPHATE, DNA LIGASE, ZINC ION
Authors:Lee, J.Y, Chang, C, Song, H.K, Kwon, S.T, Suh, S.W.
Deposit date:1999-11-25
Release date:2000-11-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of NAD(+)-dependent DNA ligase: modular architecture and functional implications.
EMBO J., 19, 2000
1C02
DownloadVisualize
BU of 1c02 by Molmil
CRYSTAL STRUCTURE OF YEAST YPD1P
Descriptor: PHOSPHOTRANSFERASE YPD1P
Authors:Song, H.K, Lee, J.Y, Lee, M.G, Suh, S.W.
Deposit date:1999-07-14
Release date:2000-01-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Insights into eukaryotic multistep phosphorelay signal transduction revealed by the crystal structure of Ypd1p from Saccharomyces cerevisiae.
J.Mol.Biol., 293, 1999
1C03
DownloadVisualize
BU of 1c03 by Molmil
CRYSTAL STRUCTURE OF YPD1P (TRICLINIC FORM)
Descriptor: HYPOTHETICAL PROTEIN YDL235C
Authors:Song, H.K, Lee, J.Y, Lee, M.G, Suh, S.W.
Deposit date:1999-07-14
Release date:2000-01-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Insights into eukaryotic multistep phosphorelay signal transduction revealed by the crystal structure of Ypd1p from Saccharomyces cerevisiae.
J.Mol.Biol., 293, 1999
5F8E
DownloadVisualize
BU of 5f8e by Molmil
Rv2258c-SAH
Descriptor: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Im, H.N, Suh, S.W.
Deposit date:2015-12-09
Release date:2016-06-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of Rv2258c from Mycobacterium tuberculosis H37Rv, an S-adenosyl-l-methionine-dependent methyltransferase
J.Struct.Biol., 193, 2016
5F8C
DownloadVisualize
BU of 5f8c by Molmil
Rv2258c-unbound
Descriptor: GLYCEROL, Methyltransferase
Authors:Im, H.N, Suh, S.W.
Deposit date:2015-12-09
Release date:2016-06-29
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of Rv2258c from Mycobacterium tuberculosis H37Rv, an S-adenosyl-l-methionine-dependent methyltransferase
J.Struct.Biol., 193, 2016
5F8F
DownloadVisualize
BU of 5f8f by Molmil
Rv2258c-SFG
Descriptor: GLYCEROL, Methyltransferase, SINEFUNGIN
Authors:Im, H.N, Suh, S.W.
Deposit date:2015-12-09
Release date:2016-06-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Rv2258c from Mycobacterium tuberculosis H37Rv, an S-adenosyl-l-methionine-dependent methyltransferase
J.Struct.Biol., 193, 2016
7WGZ
DownloadVisualize
BU of 7wgz by Molmil
SARS-CoV-2 spike glycoprotein trimer in open state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Zhu, Y, Tai, L, Yin, G, Sun, F.
Deposit date:2021-12-29
Release date:2023-01-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Novel cleavage sites identified in SARS-CoV-2 spike protein reveal mechanism for cathepsin L-facilitated viral infection and treatment strategies
Cell Discov, 8, 2022
7WGY
DownloadVisualize
BU of 7wgy by Molmil
SARS-CoV-2 spike glycoprotein trimer in Intermediate state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Zhu, Y, Tai, L, Yin, G, Sun, F.
Deposit date:2021-12-29
Release date:2023-01-04
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Novel cleavage sites identified in SARS-CoV-2 spike protein reveal mechanism for cathepsin L-facilitated viral infection and treatment strategies
Cell Discov, 8, 2022
7WGV
DownloadVisualize
BU of 7wgv by Molmil
SARS-CoV-2 spike glycoprotein trimer in closed state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, ...
Authors:Zhu, Y, Tai, L, Yin, G, Sun, F.
Deposit date:2021-12-29
Release date:2023-01-04
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Novel cleavage sites identified in SARS-CoV-2 spike protein reveal mechanism for cathepsin L-facilitated viral infection and treatment strategies
Cell Discov, 8, 2022
7WGX
DownloadVisualize
BU of 7wgx by Molmil
SARS-CoV-2 spike glycoprotein trimer in closed state after treatment with Cathepsin L
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, ...
Authors:Zhu, Y, Tai, L, Yin, G, Sun, F.
Deposit date:2021-12-29
Release date:2023-01-04
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Novel cleavage sites identified in SARS-CoV-2 spike protein reveal mechanism for cathepsin L-facilitated viral infection and treatment strategies
Cell Discov, 8, 2022
2EFF
DownloadVisualize
BU of 2eff by Molmil
Crystal structure analysis of the complex between CyaY and Co(II)
Descriptor: COBALT (II) ION, Protein cyaY
Authors:Sica, F, Franzese, M.
Deposit date:2007-02-22
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Understanding the binding properties of an unusual metal-binding protein - a study of bacterial frataxin
Febs J., 274, 2007
3OQ9
DownloadVisualize
BU of 3oq9 by Molmil
Structure of the FAS/FADD death domain assembly
Descriptor: Protein FADD, Tumor necrosis factor receptor superfamily member 6
Authors:Kabaleeswaran, V, Wu, H.
Deposit date:2010-09-02
Release date:2010-10-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (6.8 Å)
Cite:The Fas-FADD death domain complex structure reveals the basis of DISC assembly and disease mutations.
Nat.Struct.Mol.Biol., 17, 2010
1JXV
DownloadVisualize
BU of 1jxv by Molmil
Crystal Structure of Human Nucleoside Diphosphate Kinase A
Descriptor: Nucleoside Diphosphate Kinase A
Authors:Min, K, Song, H.K, Chang, C, Kim, S.Y, Lee, K.J, Suh, S.W.
Deposit date:2001-09-10
Release date:2002-04-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of human nucleoside diphosphate kinase A, a metastasis suppressor.
Proteins, 46, 2002
1TAE
DownloadVisualize
BU of 1tae by Molmil
Structural rearrangement accompanying NAD+ synthesis within a bacterial DNA ligase crystal
Descriptor: DNA ligase, NAD-dependent, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Gajiwala, K.S, Pinko, C.
Deposit date:2004-05-19
Release date:2004-11-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural rearrangement accompanying NAD+ synthesis within a bacterial DNA ligase crystal.
STRUCTURE, 12, 2004
1IX1
DownloadVisualize
BU of 1ix1 by Molmil
Crystal Structure of P.aeruginosa Peptide deformylase Complexed with Antibiotic Actinonin
Descriptor: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, ACTINONIN, ZINC ION, ...
Authors:Kim, H.-W, Yoon, H.-J, Lee, J.Y, Han, B.W, Yang, J.K, Lee, B.I, Ahn, H.J, Lee, H.H, Suh, S.W.
Deposit date:2002-06-07
Release date:2003-09-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of peptide deformylase from Staphylococcus aureus in complex with actinonin, a naturally occurring antibacterial agent
Proteins, 57, 2004
1TA8
DownloadVisualize
BU of 1ta8 by Molmil
Structural rearrangement accompanying NAD+ synthesis within a bacterial DNA ligase crystal
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase, NAD-dependent, ...
Authors:Gajiwala, K.S, Pinko, C.
Deposit date:2004-05-19
Release date:2004-11-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural rearrangement accompanying NAD+ synthesis within a bacterial DNA ligase crystal.
STRUCTURE, 12, 2004
1TX6
DownloadVisualize
BU of 1tx6 by Molmil
trypsin:BBI complex
Descriptor: Bowman-Birk type trypsin inhibitor, CALCIUM ION, Trypsin
Authors:Song, H.K, Park, E.Y, Kim, J.A, Kim, H.W, Kim, Y.S.
Deposit date:2004-07-02
Release date:2005-03-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the Bowman-Birk inhibitor from barley seeds in ternary complex with porcine trypsin
J.Mol.Biol., 343, 2004
2P1X
DownloadVisualize
BU of 2p1x by Molmil
Crystal structure analysis of the complex between CyaY and Eu(III)
Descriptor: EUROPIUM (III) ION, Protein cyaY
Authors:Sica, F, Franzese, M.
Deposit date:2007-03-06
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Understanding the binding properties of an unusual metal-binding protein-a study of bacterial frataxin
Febs J., 274, 2007
<12

 

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon