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7O6W
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BU of 7o6w by Molmil
Crystal structure of (the) VEL1 VEL polymerising domain (I664D mutant)
Descriptor: PHOSPHATE ION, VIN3-like protein 2
Authors:Fiedler, M, Franco-Echevarria, E, Dean, C, Bienz, M.
Deposit date:2021-04-12
Release date:2022-11-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Head-to-tail polymerization by VEL proteins underpins cold-induced Polycomb silencing in flowering control.
Cell Rep, 41, 2022
7O6V
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BU of 7o6v by Molmil
Crystal structure of the VEL1 VEL polymerising domain (R643A K645D I664D mutant)
Descriptor: VIN3-like protein 2
Authors:Fiedler, M, Franco-Echevarria, E, Dean, C, Bienz, M.
Deposit date:2021-04-12
Release date:2022-11-09
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Head-to-tail polymerization by VEL proteins underpins cold-induced Polycomb silencing in flowering control.
Cell Rep, 41, 2022
6S9R
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BU of 6s9r by Molmil
Crystal structure of SSDP from D. melanogaster
Descriptor: Sequence-specific single-stranded DNA-binding protein, isoform A
Authors:Renko, M, Bienz, M.
Deposit date:2019-07-15
Release date:2019-10-09
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Rotational symmetry of the structured Chip/LDB-SSDP core module of the Wnt enhanceosome.
Proc.Natl.Acad.Sci.USA, 116, 2019
6S9T
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BU of 6s9t by Molmil
Dimerization domain of Xenopus laevis LDB1 in complex with darpin 3
Descriptor: Darpin 3, LIM domain-binding protein 1, TETRAETHYLENE GLYCOL
Authors:Renko, M, Schaefer, J.V, Pluckthun, A, Bienz, M.
Deposit date:2019-07-15
Release date:2019-10-09
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Rotational symmetry of the structured Chip/LDB-SSDP core module of the Wnt enhanceosome.
Proc.Natl.Acad.Sci.USA, 116, 2019
6S9S
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BU of 6s9s by Molmil
Dimerization domain of Xenopus laevis LDB1 in complex with darpin 10
Descriptor: Darpin 10, LIM domain-binding protein 1
Authors:Renko, M, Schaefer, J.V, Pluckthun, A, Bienz, M.
Deposit date:2019-07-15
Release date:2019-10-09
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Rotational symmetry of the structured Chip/LDB-SSDP core module of the Wnt enhanceosome.
Proc.Natl.Acad.Sci.USA, 116, 2019
2BTG
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BU of 2btg by Molmil
peripheral-subunit binding domains from mesophilic,thermophilic, and hyperthermophilic bacteria fold by ultrafast, apparently two-state transitions
Descriptor: DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX
Authors:Ferguson, N, Allen, M.D.
Deposit date:2005-05-31
Release date:2006-05-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Ultra-Fast Barrier-Limited Folding in the Peripheral Subunit-Binding Domain Family.
J.Mol.Biol., 353, 2005
2BTH
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BU of 2bth by Molmil
Peripheral-subunit binding domains from mesophilic, thermophilic, and hyperthermophilic bacteria fold by ultrafast, apparently two-state transitions
Descriptor: DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX
Authors:Ferguson, N, Allen, M.D.
Deposit date:2005-05-31
Release date:2006-05-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Ultra-Fast Barrier-Limited Folding in the Peripheral Subunit-Binding Domain Family.
J.Mol.Biol., 353, 2005
5A7B
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BU of 5a7b by Molmil
Structure of the p53 cancer Y220C bound to the stabilizing small molecule PhiKan5211
Descriptor: 2-[[4-(diethylamino)piperidin-1-yl]methyl]-6-ethynyl-4-(3-phenoxyprop-1-ynyl)phenol, CELLULAR TUMOR ANTIGEN P53, ZINC ION
Authors:Joerger, A.C.
Deposit date:2015-07-03
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Experimental and Theoretical Evaluation of the Ethynyl Moiety as a Halogen Bioisostere.
Acs Chem.Biol., 10, 2015
3VVV
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BU of 3vvv by Molmil
Skich domain of NDP52
Descriptor: Calcium-binding and coiled-coil domain-containing protein 2
Authors:Akutsu, M, Muhlinen, N.V, Randow, F, Komander, D.
Deposit date:2012-07-28
Release date:2013-02-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:LC3C, bound selectively by a noncanonical LIR motif in NDP52, is required for antibacterial autophagy
Mol.Cell, 48, 2012
3VVW
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BU of 3vvw by Molmil
NDP52 in complex with LC3C
Descriptor: Calcium-binding and coiled-coil domain-containing protein 2, Microtubule-associated proteins 1A/1B light chain 3C
Authors:Akutsu, M, Muhlinen, N.V, Randow, F, Komander, D.
Deposit date:2012-07-28
Release date:2013-02-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:LC3C, bound selectively by a noncanonical LIR motif in NDP52, is required for antibacterial autophagy
Mol.Cell, 48, 2012
4AGO
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BU of 4ago by Molmil
Structure of the p53 core domain mutant Y220C bound to the stabilizing small molecule PhiKan5174
Descriptor: CELLULAR TUMOR ANTIGEN P53, TERT-BUTYL [3-(3-{[4-(DIETHYLAMINO)PIPERIDIN-1-YL]METHYL}-4-HYDROXY-5-IODOPHENYL)PROP-2-YN-1-YL]CARBAMATE, ZINC ION
Authors:Joerger, A.C, Wilcken, R, Fersht, A.R, Boeckler, F.M.
Deposit date:2012-01-30
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Halogen-Enriched Fragment Libraries as Leads for Drug Rescue of Mutant P53.
J.Am.Chem.Soc., 134, 2012
4AGN
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BU of 4agn by Molmil
Structure of the p53 core domain mutant Y220C bound to the stabilizing small molecule PhiKan5116
Descriptor: 2-{[4-(DIETHYLAMINO)PIPERIDIN-1-YL]METHYL}-4-(3-HYDROXYPROP-1-YN-1-YL)-6-IODOPHENOL, CELLULAR TUMOR ANTIGEN P53, ZINC ION
Authors:Joerger, A.C, Wilcken, R, Boeckler, F.M, Fersht, A.R.
Deposit date:2012-01-30
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Halogen-Enriched Fragment Libraries as Leads for Drug Rescue of Mutant P53.
J.Am.Chem.Soc., 134, 2012
4AGQ
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BU of 4agq by Molmil
Structure of the p53 core domain mutant Y220C bound to the stabilizing small molecule PhiKan5196
Descriptor: 2-{[4-(diethylamino)piperidin-1-yl]methyl}-6-iodo-4-[3-(phenylamino)prop-1-yn-1-yl]phenol, CELLULAR TUMOR ANTIGEN P53, ZINC ION
Authors:Joerger, A.C, Wilcken, R, Boeckler, F.M, Fersht, A.R.
Deposit date:2012-01-30
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Halogen-Enriched Fragment Libraries as Leads for Drug Rescue of Mutant P53.
J.Am.Chem.Soc., 134, 2012
3ZRH
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BU of 3zrh by Molmil
Crystal structure of the Lys29, Lys33-linkage-specific TRABID OTU deubiquitinase domain reveals an Ankyrin-repeat ubiquitin binding domain (AnkUBD)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, UBIQUITIN THIOESTERASE ZRANB1
Authors:Licchesi, J.D.F, Akutsu, M, Komander, D.
Deposit date:2011-06-16
Release date:2011-12-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:An Ankyrin-Repeat Ubiquitin-Binding Domain Determines Trabid'S Specificity for Atypical Ubiquitin Chains.
Nat.Struct.Mol.Biol., 19, 2011
4AGP
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BU of 4agp by Molmil
Structure of the p53 core domain mutant Y220C bound to the stabilizing small molecule PhiKan5176
Descriptor: 2-{[4-(diethylamino)piperidin-1-yl]methyl}-6-iodo-4-(3-phenoxyprop-1-yn-1-yl)phenol, CELLULAR TUMOR ANTIGEN P53, ZINC ION
Authors:Joerger, A.C, Wilcken, R, Fersht, A.R, Boeckler, F.M.
Deposit date:2012-01-30
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Halogen-Enriched Fragment Libraries as Leads for Drug Rescue of Mutant P53.
J.Am.Chem.Soc., 134, 2012
4AGM
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BU of 4agm by Molmil
Structure of the p53 core domain mutant Y220C bound to the stabilizing small molecule PhiKan5086
Descriptor: 2-{[4-(DIETHYLAMINO)PIPERIDIN-1-YL]METHYL}-4,6-DIIODOPHENOL, CELLULAR TUMOR ANTIGEN P53, ZINC ION
Authors:Joerger, A.C, Wilcken, R, Boeckler, F.M, Fersht, A.R.
Deposit date:2012-01-30
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Halogen-Enriched Fragment Libraries as Leads for Drug Rescue of Mutant P53.
J.Am.Chem.Soc., 134, 2012
4AGL
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BU of 4agl by Molmil
Structure of the p53 core domain mutant Y220C bound to the stabilizing small molecule PhiKan784
Descriptor: 2,4-BIS(IODANYL)-6-[[METHYL-(1-METHYLPIPERIDIN-4-YL)AMINO]METHYL]PHENOL, CELLULAR TUMOR ANTIGEN P53, ZINC ION
Authors:Joerger, A.C, Wilcken, R, Boeckler, F.M, Fersht, A.R.
Deposit date:2012-01-30
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Halogen-Enriched Fragment Libraries as Leads for Drug Rescue of Mutant P53.
J.Am.Chem.Soc., 134, 2012
2X0W
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BU of 2x0w by Molmil
STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO 5,6-dimethoxy- 2-methylbenzothiazole
Descriptor: 5,6-DIMETHOXY-2-METHYL-1,3-BENZOTHIAZOLE, CELLULAR TUMOR ANTIGEN P53, ZINC ION
Authors:Kaar, J.L, Basse, N, Joerger, A.C, Fersht, A.R.
Deposit date:2009-12-17
Release date:2010-01-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Toward the Rational Design of P53-Stabilizing Drugs: Probing the Surface of the Oncogenic Y220C Mutant.
Chem.Biol., 17, 2010
2X0U
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BU of 2x0u by Molmil
STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO A 2-amino substituted benzothiazole scaffold
Descriptor: 6,7-DIHYDRO[1,4]DIOXINO[2,3-F][1,3]BENZOTHIAZOL-2-AMINE, CELLULAR TUMOR ANTIGEN P53, ZINC ION
Authors:Joerger, A.C, Kaar, J.L, Basse, N, Fersht, A.R.
Deposit date:2009-12-17
Release date:2010-01-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Toward the Rational Design of P53-Stabilizing Drugs: Probing the Surface of the Oncogenic Y220C Mutant.
Chem.Biol., 17, 2010
2X0V
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BU of 2x0v by Molmil
STRUCTURE OF THE P53 CORE DOMAIN MUTANT Y220C BOUND TO 4-(trifluoromethyl)benzene-1,2-diamine
Descriptor: 4-(TRIFLUOROMETHYL)BENZENE-1,2-DIAMINE, CELLULAR TUMOR ANTIGEN P53, ZINC ION
Authors:Basse, N, Kaar, J.L, Joerger, A.C, Fersht, A.R.
Deposit date:2009-12-17
Release date:2010-01-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Toward the Rational Design of P53-Stabilizing Drugs: Probing the Surface of the Oncogenic Y220C Mutant.
Chem.Biol., 17, 2010
2VUK
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BU of 2vuk by Molmil
Structure of the p53 core domain mutant Y220C bound to the stabilizing small-molecule drug PhiKan083
Descriptor: 1-(9-ethyl-9H-carbazol-3-yl)-N-methylmethanamine, CELLULAR TUMOR ANTIGEN P53, ZINC ION
Authors:Joerger, A.C, Boeckler, F.M, Fersht, A.R.
Deposit date:2008-05-26
Release date:2008-07-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Targeted Rescue of a Destabilized Mutant of P53 by an in Silico Screened Drug.
Proc.Natl.Acad.Sci.USA, 105, 2008
2W0T
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BU of 2w0t by Molmil
Solution structure of the FCS zinc finger domain of human LMBL2
Descriptor: LETHAL(3)MALIGNANT BRAIN TUMOR-LIKE 2 PROTEIN, ZINC ION
Authors:Lechtenberg, B.C, Allen, M.D, Bycroft, M.
Deposit date:2008-10-10
Release date:2009-01-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the Fcs Zinc Finger Domain of the Human Polycomb Group Protein L(3)Mbt-Like 2.
Protein Sci., 18, 2009
4CKN
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BU of 4ckn by Molmil
Structure of an N-terminal fragment of Leishmania SAS-6 containing parts of its coiled coil domain, F257E mutant
Descriptor: SAS-6
Authors:van Breugel, M.
Deposit date:2014-01-07
Release date:2014-03-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the SAS-6 cartwheel hub from Leishmania major.
Elife, 3, 2014
4CKM
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BU of 4ckm by Molmil
Structure of the N-terminal domain of Leishmania SAS-6
Descriptor: GLYCEROL, MAGNESIUM ION, SAS-6
Authors:van Breugel, M.
Deposit date:2014-01-07
Release date:2014-03-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of the SAS-6 cartwheel hub from Leishmania major.
Elife, 3, 2014
4CKP
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BU of 4ckp by Molmil
Structure of an N-terminal fragment of Leishmania SAS-6 that contains part of its coiled coil domain
Descriptor: SAS-6
Authors:van Breugel, M.
Deposit date:2014-01-07
Release date:2014-03-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Structure of the SAS-6 cartwheel hub from Leishmania major.
Elife, 3, 2014

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PDB entries from 2024-11-13

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