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7X7N
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BU of 7x7n by Molmil
3D model of the 3-RBD up single trimeric spike protein of SARS-CoV2 in the presence of synthetic peptide SIH-5.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, Synthetic peptide SIH-5
Authors:Khatri, B, Pramanick, I, Malladi, S.K, Rajmani, R.S, Kumar, S, Ghosh, P, Sengupta, N, Rahisuddin, R, Kumaran, S, Ringe, R.P, Varadarajan, R, Dutta, S, Chatterjee, J.
Deposit date:2022-03-10
Release date:2022-04-27
Last modified:2022-11-16
Method:ELECTRON MICROSCOPY (4.47 Å)
Cite:A dimeric proteomimetic prevents SARS-CoV-2 infection by dimerizing the spike protein.
Nat.Chem.Biol., 18, 2022
7EPI
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BU of 7epi by Molmil
Crystal structure of E.coli CcdB mutant S60E
Descriptor: CHLORIDE ION, Toxin CcdB
Authors:Manjunath, K, Goyal, P, Varadarajan, R.
Deposit date:2021-04-26
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.931 Å)
Cite:Mechanistic insights into global suppressors of protein folding defects.
Plos Genet., 18, 2022
7EPG
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BU of 7epg by Molmil
Crystal structure of E.coli CcdB mutant S12G
Descriptor: CHLORIDE ION, Toxin CcdB
Authors:Manjunath, K, Varadarajan, R.
Deposit date:2021-04-26
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:Mechanistic insights into global suppressors of protein folding defects.
Plos Genet., 18, 2022
7EPJ
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BU of 7epj by Molmil
Crystal structure of E.coli CcdB mutant V46L
Descriptor: CHLORIDE ION, Toxin CcdB
Authors:Manjunath, K, Goyal, P, Varadarajan, R.
Deposit date:2021-04-26
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.354 Å)
Cite:Mechanistic insights into global suppressors of protein folding defects.
Plos Genet., 18, 2022
1KEB
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BU of 1keb by Molmil
Crystal Structure of Double Mutant M37L,P40S E.coli Thioredoxin
Descriptor: COPPER (II) ION, Thioredoxin 1
Authors:Rudresh, Jain, R, Dani, V, Mitra, A, Srivastava, S, Sarma, S.P, Varadarajan, R, Ramakumar, S.
Deposit date:2001-11-15
Release date:2002-11-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Consequences of Replacement of an alpha-helical Pro Residue in E.coli Thioredoxin
PROTEIN ENG., 15, 2002
1SH9
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BU of 1sh9 by Molmil
Comparing the Accumulation of Active Site and Non-active Site Mutations in the HIV-1 Protease
Descriptor: POL polyprotein, RITONAVIR
Authors:Clemente, J.C, Moose, R.E, Hemrajani, R, Govindasamy, L, Reutzel, R, McKenna, R, Abanje-McKenna, M, Goodenow, M.M, Dunn, B.M.
Deposit date:2004-02-25
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Comparing the Accumulation of Active- and Nonactive-Site Mutations in the HIV-1 Protease.
Biochemistry, 43, 2004
1SGU
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BU of 1sgu by Molmil
Comparing the Accumulation of Active Site and Non-active Site Mutations in the HIV-1 Protease
Descriptor: N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, POL polyprotein
Authors:Clemente, J.C, Moose, R.E, Hemrajani, R, Govindasamy, L, Reutzel, R, Mckenna, R, Abandje-McKenna, M, Goodenow, M.M, Dunn, B.M.
Deposit date:2004-02-24
Release date:2004-10-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparing the Accumulation of Active- and Nonactive-Site Mutations in the HIV-1 Protease.
Biochemistry, 43, 2004
1CJR
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BU of 1cjr by Molmil
X-RAY CRYSTALLOGRAPHIC STUDIES OF DENATURATION IN RIBONUCLEASE S
Descriptor: PROTEIN (RIBONUCLEASE S), SULFATE ION
Authors:Ratnaparkhi, G.S, Varadarajan, R.
Deposit date:1999-04-19
Release date:1999-05-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray crystallographic studies of the denaturation of ribonuclease S.
Proteins, 36, 1999
1CJQ
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BU of 1cjq by Molmil
X-RAY CRYSTALLOGRAPHIC STUDIES OF THE DENATURATION OF THE DENATURATION OF RIBONUCLEASE S.
Descriptor: PROTEIN (RIBONUCLEASE S), SULFATE ION
Authors:Ratnaparkhi, G.S, Varadarajan, R.
Deposit date:1999-04-19
Release date:1999-05-07
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-ray crystallographic studies of the denaturation of ribonuclease S.
Proteins, 36, 1999
1J7Z
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BU of 1j7z by Molmil
Osmolyte Stabilization of Ribonuclease
Descriptor: RIBONUCLEASE PANCREATIC, SULFATE ION
Authors:Ratnaparkhi, G.S, Varadarajan, R.
Deposit date:2001-05-19
Release date:2001-06-06
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Osmolytes stabilize ribonuclease S by stabilizing its fragments S protein and S peptide to compact folding-competent states.
J.Biol.Chem., 276, 2001
1J81
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BU of 1j81 by Molmil
Osmolyte Stabilization of RNase
Descriptor: RIBONUCLEASE PANCREATIC, SULFATE ION
Authors:Ratnaparkhi, G.S, Varadarajan, R.
Deposit date:2001-05-19
Release date:2001-06-06
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Osmolytes stabilize ribonuclease S by stabilizing its fragments S protein and S peptide to compact folding-competent states.
J.Biol.Chem., 276, 2001
1J80
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BU of 1j80 by Molmil
Osmolyte Stabilization of RNase
Descriptor: RIBONUCLEASE PANCREATIC, SULFATE ION
Authors:Ratnaparkhi, G.S, Varadarajan, R.
Deposit date:2001-05-19
Release date:2001-06-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Osmolytes stabilize ribonuclease S by stabilizing its fragments S protein and S peptide to compact folding-competent states.
J.Biol.Chem., 276, 2001
1J82
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BU of 1j82 by Molmil
Osmolyte Stabilization of RNase
Descriptor: RIBONUCLEASE PANCREATIC, SULFATE ION
Authors:Ratnaparkhi, G.S, Varadarajan, R.
Deposit date:2001-05-19
Release date:2001-06-06
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Osmolytes stabilize ribonuclease S by stabilizing its fragments S protein and S peptide to compact folding-competent states.
J.Biol.Chem., 276, 2001
2RNS
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BU of 2rns by Molmil
REFINEMENT OF THE CRYSTAL STRUCTURE OF RIBONUCLEASE S. COMPARISON WITH AND BETWEEN THE VARIOUS RIBONUCLEASE A STRUCTURES
Descriptor: RIBONUCLEASE S, SULFATE ION
Authors:Kim, E.E, Varadarajan, R, Wyckoff, H.W, Richards, F.M.
Deposit date:1992-02-19
Release date:1994-01-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Refinement of the crystal structure of ribonuclease S. Comparison with and between the various ribonuclease A structures.
Biochemistry, 31, 1992
5WHW
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BU of 5whw by Molmil
Using sound pulses to solve the crystal harvesting bottleneck
Descriptor: 1,2-ETHANEDIOL, BICINE, CALCIUM ION, ...
Authors:Soares, A.S, Brennan, H.M, Natarajan, R, McCarthy, L, Leroy, L.
Deposit date:2017-07-18
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Using sound pulses to solve the crystal-harvesting bottleneck.
Acta Crystallogr D Struct Biol, 74, 2018
1Z3L
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BU of 1z3l by Molmil
X-Ray Crystal Structure of a Mutant Ribonuclease S (F8Anb)
Descriptor: Ribonuclease pancreatic, S-Peptide, S-Protein, ...
Authors:Das, M, Vasudeva Rao, B, Ghosh, S, Varadarajan, R.
Deposit date:2005-03-14
Release date:2005-03-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Attempts to delineate the relative contributions of changes in hydrophobicity and packing to changes in stability of ribonuclease S mutants.
Biochemistry, 44, 2005
1Z3P
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BU of 1z3p by Molmil
X-Ray crystal structure of a mutant Ribonuclease S (M13Nva)
Descriptor: Ribonuclease pancreatic, S-Peptide, S-Protein, ...
Authors:Das, M, Rao, B.V, Ghosh, S, Varadarajan, R.
Deposit date:2005-03-14
Release date:2005-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Attempts to delineate the relative contributions of changes in hydrophobicity and packing to changes in stability of ribonuclease S mutants.
Biochemistry, 44, 2005
1Z3M
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BU of 1z3m by Molmil
Crystal structure of mutant Ribonuclease S (F8Nva)
Descriptor: Ribonuclease pancreatic, S-Peptide, S-protein, ...
Authors:Das, M, Vasudeva Rao, B, Ghosh, S, Varadarajan, R.
Deposit date:2005-03-14
Release date:2005-03-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Attempts to delineate the relative contributions of changes in hydrophobicity and packing to changes in stability of ribonuclease S mutants.
Biochemistry, 44, 2005
1RNV
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BU of 1rnv by Molmil
REFINEMENT OF THE CRYSTAL STRUCTURE OF RIBONUCLEASE S. COMPARISON WITH AND BETWEEN THE VARIOUS RIBONUCLEASE A STRUCTURES
Descriptor: RIBONUCLEASE S, SULFATE ION
Authors:Kim, E.E, Varadarajan, R, Wyckoff, H.W, Richards, F.M.
Deposit date:1992-02-19
Release date:1994-01-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Refinement of the crystal structure of ribonuclease S. Comparison with and between the various ribonuclease A structures.
Biochemistry, 31, 1992
1RNU
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BU of 1rnu by Molmil
REFINEMENT OF THE CRYSTAL STRUCTURE OF RIBONUCLEASE S. COMPARISON WITH AND BETWEEN THE VARIOUS RIBONUCLEASE A STRUCTURES
Descriptor: RIBONUCLEASE S, SULFATE ION
Authors:Kim, E.E, Varadarajan, R, Wyckoff, H.W, Richards, F.M.
Deposit date:1992-02-19
Release date:1994-01-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Refinement of the crystal structure of ribonuclease S. Comparison with and between the various ribonuclease A structures.
Biochemistry, 31, 1992
6UGJ
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BU of 6ugj by Molmil
Crystal structure of a fragment of E. coli tRNA(Asp) consisting of its acceptor stem/T stem-loop. Short unit cell.
Descriptor: DIPHOSPHATE, SULFATE ION, URACIL, ...
Authors:Chan, C.W, Mondragon, A.
Deposit date:2019-09-26
Release date:2020-01-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of an unmodified bacterial tRNA reveal intrinsic structural flexibility and plasticity as general properties of unbound tRNAs.
Rna, 26, 2020
6UGG
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BU of 6ugg by Molmil
Structure of unmodified E. coli tRNA(Asp)
Descriptor: tRNAasp
Authors:Chan, C.W, Mondragon, A.
Deposit date:2019-09-26
Release date:2020-01-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of an unmodified bacterial tRNA reveal intrinsic structural flexibility and plasticity as general properties of unbound tRNAs.
Rna, 26, 2020
6UGI
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BU of 6ugi by Molmil
Crystal structure of a fragment of E. coli tRNA(Asp) consisting of its acceptor stem/T stem-loop. Long unit cell.
Descriptor: SULFATE ION, tRNA(Asp) acceptor stem/T stem-loop
Authors:Chan, C.W, Mondragon, A.
Deposit date:2019-09-26
Release date:2020-01-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures of an unmodified bacterial tRNA reveal intrinsic structural flexibility and plasticity as general properties of unbound tRNAs.
Rna, 26, 2020
6P6G
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BU of 6p6g by Molmil
Co-crystal Structure of human SMYD3 with Isoxazole Amides Inhibitors
Descriptor: 5-cyclopropyl-N-{1-[({trans-4-[(4,4,4-trifluorobutyl)amino]cyclohexyl}methyl)sulfonyl]piperidin-4-yl}-1,2-oxazole-3-carboxamide, GLYCEROL, Histone-lysine N-methyltransferase SMYD3, ...
Authors:Elkins, P.A, Wang, L.
Deposit date:2019-06-03
Release date:2020-01-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Discovery of Isoxazole Amides as Potent and Selective SMYD3 Inhibitors.
Acs Med.Chem.Lett., 11, 2020
6NT2
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BU of 6nt2 by Molmil
type 1 PRMT in complex with the inhibitor GSK3368715
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GLYCEROL, N~1~-({5-[4,4-bis(ethoxymethyl)cyclohexyl]-1H-pyrazol-4-yl}methyl)-N~1~,N~2~-dimethylethane-1,2-diamine, ...
Authors:Concha, N.O.
Deposit date:2019-01-28
Release date:2019-07-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Anti-tumor Activity of the Type I PRMT Inhibitor, GSK3368715, Synergizes with PRMT5 Inhibition through MTAP Loss.
Cancer Cell, 36, 2019

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