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Structure of the Chaetomium thermophilum Ulp1-like SUMO protease catalytic domain
Descriptor:	GLYCEROL, SULFATE ION, Ulp1-like SUMO protease
Authors:	Lima, C.D, Baytshtok, V.
Deposit date:	2018-05-16
Release date:	2018-07-11
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (1.442 Å)
Cite:	Discovery and engineering of enhanced SUMO protease enzymes. J. Biol. Chem., 293, 2018

7LV6

The structure of MalL mutant enzyme S536R from Bacillus subtilis
Descriptor:	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, GLYCEROL, ...
Authors:	Hamill, C.J, Prentice, E.J, Bahl, C.D, Truebridge, I.S, Arcus, V.L.
Deposit date:	2021-02-24
Release date:	2022-03-09
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.1 Å)
Cite:	Urea binding to guide rational design of mutations that influence enzyme dynamics To Be Published

8RQU

Structure of TEM1 beta-lactamase variant 70.a
Descriptor:	Beta-lactamase TEM-1, MAGNESIUM ION
Authors:	Napier, E, Fram, B.F, Gauthier, N.P, Sander, C, Khan, A.R.
Deposit date:	2024-01-19
Release date:	2024-02-14
Last modified:	2024-07-17
Method:	X-RAY DIFFRACTION (2.9 Å)
Cite:	Simultaneous enhancement of multiple functional properties using evolution-informed protein design. Nat Commun, 15, 2024

5KWX

NMR Solution Structure of Designed Peptide NC_EEH_D1
Descriptor:	Designed peptide NC_EEH_D1
Authors:	Harvey, P.J, Craik, D.J.
Deposit date:	2016-07-19
Release date:	2016-09-21
Last modified:	2024-11-13
Method:	SOLUTION NMR
Cite:	Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016

7SOH

Exploring Cystine Dense Peptide Space to Open a Unique Molecular Toolbox
Descriptor:	Chlorotoxin
Authors:	Gewe, M.M, Strong, R.K.
Deposit date:	2021-10-30
Release date:	2022-06-29
Last modified:	2024-10-16
Method:	X-RAY DIFFRACTION (1.81 Å)
Cite:	Screening, large-scale production and structure-based classification of cystine-dense peptides. Nat Struct Mol Biol, 25, 2018

5VMR

Receptor binding domain of BoNT/B in complex with mini-protein binder Bot.2110.4
Descriptor:	Bot.2110.4, Botulinum neurotoxin type B
Authors:	Jin, R, Lam, K, Yao, G.
Deposit date:	2017-04-28
Release date:	2017-09-20
Last modified:	2024-10-23
Method:	X-RAY DIFFRACTION (1.95 Å)
Cite:	Massively parallel de novo protein design for targeted therapeutics. Nature, 550, 2017

5VID

Receptor binding domain of BoNT/B in complex with mini-protein binder Bot.0671.2
Descriptor:	Bot.0671.2, Botulinum neurotoxin type B
Authors:	Jin, R, Lam, K, Yao, G.
Deposit date:	2017-04-15
Release date:	2017-09-20
Last modified:	2023-10-04
Method:	X-RAY DIFFRACTION (2.75 Å)
Cite:	Massively parallel de novo protein design for targeted therapeutics. Nature, 550, 2017

5VLI

Computationally designed inhibitor peptide HB1.6928.2.3 in complex with influenza hemagglutinin (A/PuertoRico/8/1934)
Descriptor:	2,5,8,11-TETRAOXATRIDECANE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:	Bernard, S.M, Wilson, I.A.
Deposit date:	2017-04-25
Release date:	2017-09-27
Last modified:	2024-10-23
Method:	X-RAY DIFFRACTION (1.799 Å)
Cite:	Massively parallel de novo protein design for targeted therapeutics. Nature, 550, 2017

6X1N

Crystal Structure of Choanoflagellate (Monosiga brevicollis) Dlg1 PDZ3 (mbDLG-3)
Descriptor:	GLYCEROL, mbDLG-3 protein
Authors:	Mackley, I, Amacher, J.F.
Deposit date:	2020-05-19
Release date:	2020-11-25
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.4 Å)
Cite:	Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis. Protein Sci., 29, 2020

6X20

PDZ domain from choanoflagellate GIPC (mbGIPC) bound to B1AR peptide
Descriptor:	mbGIPC protein
Authors:	Gao, M, Amacher, J.F.
Deposit date:	2020-05-19
Release date:	2020-11-25
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.402 Å)
Cite:	Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis. Protein Sci., 29, 2020

6X22

PDZ domain from choanoflagellate GIPC (mbGIPC) bound to GAIP peptide
Descriptor:	mbGIPC protein
Authors:	Gao, M, Amacher, J.F.
Deposit date:	2020-05-19
Release date:	2020-11-25
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.402 Å)
Cite:	Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis. Protein Sci., 29, 2020

8GII

TEM-1 Beta Lactamase Variant 80.a
Descriptor:	2-(N-MORPHOLINO)-ETHANESULFONIC ACID, TEM-1 Variant 80.a
Authors:	Fram, B.F, Gauthier, N.P, Khan, A.R, Sander, C.
Deposit date:	2023-03-14
Release date:	2024-04-17
Last modified:	2024-07-17
Method:	X-RAY DIFFRACTION (1.83 Å)
Cite:	Simultaneous enhancement of multiple functional properties using evolution-informed protein design. Nat Commun, 15, 2024

8GIJ

TEM-1 Beta Lactamase Variant 80.b
Descriptor:	TEM-1 Beta Lactmase Variant 80.b
Authors:	Fram, B.F, Gauthier, N.P, Khan, A, Sander, C.
Deposit date:	2023-03-14
Release date:	2024-04-17
Last modified:	2024-07-17
Method:	X-RAY DIFFRACTION (1.59 Å)
Cite:	Simultaneous enhancement of multiple functional properties using evolution-informed protein design. Nat Commun, 15, 2024

5KWO

NMR Solution Structure of Designed Peptide NC_EHE_D1
Descriptor:	Designed peptide NC_EHE_D1
Authors:	Harvey, P.J, Craik, D.J.
Deposit date:	2016-07-18
Release date:	2016-09-21
Last modified:	2024-10-16
Method:	SOLUTION NMR
Cite:	Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016

5KX2

NMR Solution Structure of Designed Peptide NC_cEE_D1
Descriptor:	Designed peptide NC_cEE_D1
Authors:	Harvey, P.J, Craik, D.J.
Deposit date:	2016-07-19
Release date:	2016-09-21
Last modified:	2024-10-30
Method:	SOLUTION NMR
Cite:	Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016

5KWZ

NMR Solution Structure of Designed Peptide NC_cHH_D1
Descriptor:	Designed peptide NC_cHH_D1
Authors:	Harvey, P.J, Craik, D.J.
Deposit date:	2016-07-19
Release date:	2016-09-21
Last modified:	2024-10-16
Method:	SOLUTION NMR
Cite:	Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016

5KX0

NMR Solution Structure of Designed Peptide NC_cHh_DL_D1
Descriptor:	Designed peptide NC_cHh_DL_D1
Authors:	Harvey, P.J, Craik, D.J.
Deposit date:	2016-07-19
Release date:	2016-09-21
Last modified:	2024-10-16
Method:	SOLUTION NMR
Cite:	Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016

5KWP

NMR Solution Structure of Designed Peptide NC_EEH_D2
Descriptor:	Designed peptide NC_EEH_D2
Authors:	Harvey, P.J, Craik, D.J.
Deposit date:	2016-07-18
Release date:	2016-09-21
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016

5KX1

NMR Solution Structure of Designed Peptide NC_cHHH_D1
Descriptor:	Designed peptide NC_cHHH_D1
Authors:	Harvey, P.J, Craik, D.J.
Deposit date:	2016-07-19
Release date:	2016-09-21
Last modified:	2024-11-13
Method:	SOLUTION NMR
Cite:	Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016

5KVN

NMR Solution Structure of Designed Peptide NC_HEE_D1
Descriptor:	Designed peptide NC_HEE_D1
Authors:	Harvey, P.J, Craik, D.J.
Deposit date:	2016-07-14
Release date:	2016-09-21
Last modified:	2024-10-23
Method:	SOLUTION NMR
Cite:	Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016

6X1X

PDZ domain from choanoflagellate GIPC (mbGIPC)
Descriptor:	GLYCEROL, mbGIPC protein
Authors:	Gao, M, Amacher, J.F.
Deposit date:	2020-05-19
Release date:	2020-11-25
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.198 Å)
Cite:	Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis. Protein Sci., 29, 2020

6X1P

Crystal Structure of Choanoflagellate (Monosiga brevicollis) Dlg1 PDZ2 (mbDLG-2) in spacegroup I2
Descriptor:	mbDLG protein
Authors:	Bamonte, H.A, Amacher, J.F.
Deposit date:	2020-05-19
Release date:	2020-11-25
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.702 Å)
Cite:	Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis. Protein Sci., 29, 2020

6X23

PDZ domain from choanoflagellate SHANK1 (mbSHANK1) bound to GIRK3 peptide
Descriptor:	G protein-activated inward rectifier potassium channel 3, mbSHANK1 protein
Authors:	Gao, M, Mackley, I.G.P, Amacher, J.F.
Deposit date:	2020-05-19
Release date:	2020-11-25
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (2.154 Å)
Cite:	Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis. Protein Sci., 29, 2020

6X1R

Crystal Structure of Choanoflagellate (Monosiga brevicollis) Dlg1 PDZ2 (mbDLG-2) in spacegroup P212121
Descriptor:	GLYCEROL, mbDLG protein
Authors:	Bamonte, H.A, Amacher, J.F.
Deposit date:	2020-05-19
Release date:	2020-11-25
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.3 Å)
Cite:	Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis. Protein Sci., 29, 2020

5JG9

Crystal structure of the de novo mini protein gEHEE_06
Descriptor:	CHLORIDE ION, GLYCEROL, de novo design, ...
Authors:	Rupert, P.B, Johnsen, W.A.
Deposit date:	2016-04-19
Release date:	2016-09-28
Last modified:	2024-11-06
Method:	X-RAY DIFFRACTION (2.09 Å)
Cite:	Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016

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