Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4J4Z
DownloadVisualize
BU of 4j4z by Molmil
Crystal structure of the improved variant of the evolved serine hydrolase, OSH55.4_H1.2, bond with sulfate ion in the active site, Northeast Structural Genomics Consortium (NESG) Target OR301
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, Designed serine hydrolase variant OSH55.4_H1.2, ...
Authors:Kuzin, A.P, Lew, S, Rajagopalan, S, Maglaqui, M, Xiao, R, Lee, D, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-02-07
Release date:2013-03-06
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Crystal structure of the improved variant of the evolved serine hydrolase, OSH55.4_H1.2, bond with sulfate ion in the active site, Northeast Structural Genomics Consortium (NESG) Target OR301
To be Published
4JBC
DownloadVisualize
BU of 4jbc by Molmil
Crystal Structure of the computationally designed serine hydrolase 3mmj_2, Northeast Structural Genomics Consortium (NESG) Target OR318
Descriptor: PHOSPHATE ION, designed serine hydrolase 3mmj_2
Authors:Kuzin, A, Lew, S, Rajagopalan, S, Seetharaman, J, Maglaqui, M, Xiao, R, Lee, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Baker, D, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-02-19
Release date:2013-03-20
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Crystal Structure of the computationally designed serine hydrolase 3mmj_2, Northeast Structural Genomics Consortium (NESG) Target OR318
To be Published
2XC8
DownloadVisualize
BU of 2xc8 by Molmil
Crystal structure of the gene 22 product of the Bacillus subtilis SPP1 phage
Descriptor: GENE 22 PRODUCT
Authors:Veesler, D, Blangy, S, Tavares, P, Campanacci, V, Cambillau, C.
Deposit date:2010-04-19
Release date:2010-06-09
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structure of Bacillus Subtilis Spp1 Phage Gp22 Shares Fold Similarity with a Domain of Lactococcal Phage P2 Rbp.
Protein Sci., 19, 2010
2XHD
DownloadVisualize
BU of 2xhd by Molmil
Crystal structure of N-((2S)-5-(6-fluoro-3-pyridinyl)-2,3-dihydro-1H- inden-2-yl)-2-propanesulfonamide in complex with the ligand binding domain of the human GluA2 receptor
Descriptor: GLUTAMATE RECEPTOR 2, GLUTAMIC ACID, N-[(2S)-5-(6-FLUORO-3-PYRIDINYL)-2,3-DIHYDRO-1H-INDEN-2-YL]-2-PROPANESULFONAMIDE, ...
Authors:Ward, S.E, Harries, M, Aldegheri, L, Andreotti, D, Ballantine, S, Bax, B.D, Harris, A.J, Harker, A.J, Lund, J, Melarange, R, Mingardi, A, Mookherjee, C, Mosley, J, Neve, M, Oliosi, B, Profeta, R, Smith, K.J, Smith, P.W, Spada, S, Thewlis, K.M, Yusaf, S.P.
Deposit date:2010-06-14
Release date:2010-07-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of N-[(2S)-5-(6-Fluoro-3-Pyridinyl)-2,3-Dihydro-1H-Inden-2-Yl]-2-Propanesulfonamide, a Novel Clinical Ampa Receptor Positive Modulator.
J.Med.Chem., 53, 2010
3U6X
DownloadVisualize
BU of 3u6x by Molmil
Phage TP901-1 baseplate tripod
Descriptor: BPP, BROMIDE ION, ORF48
Authors:Veesler, D, Spinelli, S, Mahony, J, Lichiere, J, Blangy, S, Bricogne, G, Legrand, P, Ortiz-Lombardia, M, Campanacci, V.I, van Sinderen, D, Cambillau, C.
Deposit date:2011-10-13
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism.
Proc.Natl.Acad.Sci.USA, 109, 2012
4MPS
DownloadVisualize
BU of 4mps by Molmil
Crystal structure of rat Beta-galactoside alpha-2,6-sialyltransferase 1 (ST6GAL1), Northeast Structural Genomics Consortium Target RnR367A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-galactoside alpha-2,6-sialyltransferase 1
Authors:Forouhar, F, Meng, L, Milaninia, S, Seetharaman, J, Su, M, Kornhaber, G, Montelione, G.T, Hunt, J.F, Moremen, K.W, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-09-13
Release date:2013-09-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Enzymatic Basis for N-Glycan Sialylation: STRUCTURE OF RAT alpha 2,6-SIALYLTRANSFERASE (ST6GAL1) REVEALS CONSERVED AND UNIQUE FEATURES FOR GLYCAN SIALYLATION.
J.Biol.Chem., 288, 2013
4NAS
DownloadVisualize
BU of 4nas by Molmil
The crystal structure of a rubisco-like protein (MtnW) from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Descriptor: CALCIUM ION, CHLORIDE ION, FORMIC ACID, ...
Authors:Tan, K, Li, H, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-10-22
Release date:2013-11-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The crystal structure of a rubisco-like protein (MtnW) from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446.
To be Published
4OVJ
DownloadVisualize
BU of 4ovj by Molmil
Extracellular solute-binding protein family 1 from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Descriptor: Extracellular solute-binding protein family 1, SULFATE ION
Authors:Chang, C, Clancy, S, Li, H, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-10-14
Release date:2013-11-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:extracellular solute-binding protein family 1 from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
to be published
4MQD
DownloadVisualize
BU of 4mqd by Molmil
Crystal structure of ComJ, inhibitor of the DNA degrading activity of NucA, from Bacillus subtilis
Descriptor: DNA-entry nuclease inhibitor
Authors:Chang, C, Mack, J, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-09-16
Release date:2013-10-09
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of ComJ, inhibitor of the DNA degrading activity of NucA, from Bacillus subtilis
To be Published
5L6Q
DownloadVisualize
BU of 5l6q by Molmil
Refolded AL protein from cardiac amyloidosis
Descriptor: CARBONATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Annamalai, K, Liberta, F, Vielberg, M.-T, Lilie, H, Guehrs, K.-H, Schierhorn, A, Koehler, R, Schmidt, A, Haupt, C, Hegenbart, O, Schoenland, S, Groll, M, Faendrich, M.
Deposit date:2016-05-31
Release date:2017-05-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Common Fibril Structures Imply Systemically Conserved Protein Misfolding Pathways In Vivo.
Angew. Chem. Int. Ed. Engl., 56, 2017
4OVM
DownloadVisualize
BU of 4ovm by Molmil
Crystal structure of SgcJ protein from Streptomyces carzinostaticus
Descriptor: uncharacterized protein SgcJ
Authors:Chang, C, Bigelow, L, Clancy, S, Bingman, C.A, Yennamalli, R, Lohman, J.R, Ma, M, Shen, B, Phillips Jr, G.N, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2013-11-20
Release date:2013-12-25
Last modified:2023-03-22
Method:X-RAY DIFFRACTION (2.719 Å)
Cite:Crystal structure of SgcJ, an NTF2-like superfamily protein involved in biosynthesis of the nine-membered enediyne antitumor antibiotic C-1027.
J.Antibiot., 2016
4HEM
DownloadVisualize
BU of 4hem by Molmil
Llama vHH-02 binder of ORF49 (RBP) from lactococcal phage TP901-1
Descriptor: Anti-baseplate TP901-1 Llama vHH 02, BPP
Authors:Desmyter, A, Spinelli, S, Farenc, C, Blangy, S, Bebeacua, C, van Sinderen, D, Mahony, J, Cambillau, C.
Deposit date:2012-10-04
Release date:2013-03-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Viral infection modulation and neutralization by camelid nanobodies
Proc.Natl.Acad.Sci.USA, 110, 2013
4HEP
DownloadVisualize
BU of 4hep by Molmil
Complex of lactococcal phage TP901-1 with a llama vHH (vHH17) binder (nanobody)
Descriptor: BPP, SULFATE ION, vHH17 domain
Authors:Desmyter, A, Spinelli, S, Farenc, C, Blangy, S, Bebeacua, C, van Sinderen, D, Mahony, J, Cambillau, C.
Deposit date:2012-10-04
Release date:2013-03-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Viral infection modulation and neutralization by camelid nanobodies
Proc.Natl.Acad.Sci.USA, 110, 2013
4IOS
DownloadVisualize
BU of 4ios by Molmil
Structure of phage TP901-1 RBP (ORF49) in complex with nanobody 11.
Descriptor: BPP, GLYCEROL, Llama nanobody 11
Authors:Desmyter, A, Farenc, C, Mahony, J, Spinelli, S, Bebeacua, C, Blangy, S, Veesler, D, van Sinderen, D, Cambillau, C.
Deposit date:2013-01-08
Release date:2013-03-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Viral infection modulation and neutralization by camelid nanobodies
Proc.Natl.Acad.Sci.USA, 110, 2013
4MPT
DownloadVisualize
BU of 4mpt by Molmil
Crystal Structure of Periplasmic binding Protein Type 1 from Bordetella pertussis Tohama I
Descriptor: ACETIC ACID, Putative leu/ile/val-binding protein, SODIUM ION
Authors:Kim, Y, Joachimiak, G, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-09-13
Release date:2013-12-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Periplasmic binding Protein Type 1 from Bordetella pertussis Tohama I
To be Published
3UH8
DownloadVisualize
BU of 3uh8 by Molmil
N-terminal domain of phage TP901-1 ORF48
Descriptor: ORF48
Authors:Veesler, D, Spinelli, S, Mahony, J, Lichiere, J, Blangy, S, Bricogne, G, Legrand, P, Ortiz-Lombardia, M, Campanacci, V.I, van Sinderen, D, Cambillau, C.
Deposit date:2011-11-03
Release date:2012-05-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism.
Proc.Natl.Acad.Sci.USA, 109, 2012
4M7O
DownloadVisualize
BU of 4m7o by Molmil
The crystal structure of a possible an iron-binding (periplasmic solute-binding) protein from Staphylococcus epidermidis ATCC 12228.
Descriptor: Iron-binding protein
Authors:Tan, K, Li, H, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-08-12
Release date:2013-08-28
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:The crystal structure of a possible an iron-binding (periplasmic solute-binding) protein from Staphylococcus epidermidis ATCC 12228.
To be Published
4PEV
DownloadVisualize
BU of 4pev by Molmil
Crystal structure of ABC transporter system solute-binding proteins from Aeropyrum pernix K1
Descriptor: ADENOSINE, GLYCEROL, Membrane lipoprotein family protein
Authors:Chang, C, Li, H, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-04-25
Release date:2014-05-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal structure of ABC transporter system solute-binding proteins from Aeropyrum pernix K1
to be published
1G27
DownloadVisualize
BU of 1g27 by Molmil
CRYSTAL STRUCTURE OF E.COLI POLYPEPTIDE DEFORMYLASE COMPLEXED WITH THE INHIBITOR BB-3497
Descriptor: 2-[(FORMYL-HYDROXY-AMINO)-METHYL]-HEXANOIC ACID (1-DIMETHYLCARBAMOYL-2,2-DIMETHYL-PROPYL)-AMIDE, NICKEL (II) ION, POLYPEPTIDE DEFORMYLASE
Authors:Clements, J.M, Beckett, P, Brown, A, Catlin, C, Lobell, M, Palan, S, Thomas, W, Whittaker, M, Baker, P.J, Rodgers, H.F, Barynin, V, Rice, D.W, Hunter, M.G.
Deposit date:2000-10-17
Release date:2001-10-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Antibiotic activity and characterization of BB-3497, a novel peptide deformylase inhibitor.
Antimicrob.Agents Chemother., 45, 2001
4L0J
DownloadVisualize
BU of 4l0j by Molmil
Structure of a translocation signal domain mediating conjugative transfer by type IV secretion systems
Descriptor: DNA helicase I, MAGNESIUM ION, SULFATE ION
Authors:Redzej, A, Ilangovan, A, Lang, S, Gruber, C.J, Topf, M, Zangger, K, Zechner, E.L, Waksman, G.
Deposit date:2013-05-31
Release date:2013-06-19
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of a translocation signal domain mediating conjugative transfer by type IV secretion systems.
Mol.Microbiol., 89, 2013
5IX8
DownloadVisualize
BU of 5ix8 by Molmil
Crystal structure of sugar ABC transport system, substrate-binding protein from Bordetella parapertussis 12822
Descriptor: 1,2-ETHANEDIOL, Putative sugar ABC transport system, substrate-binding protein, ...
Authors:Chang, C, Cuff, M, Joachimiak, G, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2016-03-23
Release date:2016-04-06
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of sugar ABC transport system, substrate-binding protein from Bordetella parapertussis 12822
To Be Published
5JMU
DownloadVisualize
BU of 5jmu by Molmil
The crystal structure of the catalytic domain of peptidoglycan N-acetylglucosamine deacetylase from Eubacterium rectale ATCC 33656
Descriptor: ACETATE ION, MAGNESIUM ION, Peptidoglycan N-acetylglucosamine deacetylase, ...
Authors:Tan, K, Gu, M, Clancy, S, Joachimiak, A.
Deposit date:2016-04-29
Release date:2016-06-29
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:The crystal structure of the catalytic domain of peptidoglycan N-acetylglucosamine deacetylase from Eubacterium rectale ATCC 33656 (CASP target)
To Be Published
1S1E
DownloadVisualize
BU of 1s1e by Molmil
Crystal Structure of Kv Channel-interacting protein 1 (KChIP-1)
Descriptor: CALCIUM ION, Kv channel interacting protein 1
Authors:Scannevin, R.H, Wang, K.-W, Jow, F, Megules, J, Kopsco, D.C, Edris, W, Carroll, K.C, Lu, Q, Xu, W.-X, Xu, Z.-B, Katz, A.H, Olland, S, Lin, L, Taylor, M, Stahl, M, Malakian, K, Somers, W, Mosyak, L, Bowlby, M.R, Chanda, P, Rhodes, K.J.
Deposit date:2004-01-06
Release date:2005-01-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Two N-terminal domains of Kv4 K(+) channels regulate binding to and modulation by KChIP1.
Neuron, 41, 2004
1QQT
DownloadVisualize
BU of 1qqt by Molmil
METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI
Descriptor: METHIONYL-TRNA SYNTHETASE, ZINC ION
Authors:Mechulam, Y, Schmitt, E, Maveyraud, L, Zelwer, C, Nureki, O, Yokoyama, S, Konno, M, Blanquet, S.
Deposit date:1999-06-08
Release date:2000-01-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of Escherichia coli methionyl-tRNA synthetase highlights species-specific features.
J.Mol.Biol., 294, 1999
3B4Q
DownloadVisualize
BU of 3b4q by Molmil
Crystal structure of a conserved protein domain (unknown function) from Corynebacterium diphtheriae
Descriptor: SULFATE ION, Uncharacterized protein
Authors:Tan, K, Maltseva, N, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-10-24
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The structure of a conserved protein domain (unknown function) from Corynebacterium diphtheriae.
To be Published

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon