Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8PMI
DownloadVisualize
BU of 8pmi by Molmil
Structure of Nal1 indica cultivar IR64, construct 36-458 in presence of peptide from FZP protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, AMMONIUM ION, MAGNESIUM ION, ...
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-28
Release date:2024-04-17
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PME
DownloadVisualize
BU of 8pme by Molmil
Structure of Nal1 indica cultivar IR64, construct 88-458
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Narrow leaf 1, ...
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-28
Release date:2024-04-17
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PML
DownloadVisualize
BU of 8pml by Molmil
Structure of Nal1 protein , SPIKE allele from japonica rice, construct 46-458
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-29
Release date:2024-04-17
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PMG
DownloadVisualize
BU of 8pmg by Molmil
Structure of Nal1 indica cultivar IR64, construct 36-458
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-28
Release date:2024-04-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PMM
DownloadVisualize
BU of 8pmm by Molmil
Structure of Nal1 protein, allele SPIKE from japonica rice, construct 31-458
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-29
Release date:2024-04-17
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PN2
DownloadVisualize
BU of 8pn2 by Molmil
CryoEM structure of Nal1 protein, allele IR64, from Oryza sativa indica cultivar
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-29
Release date:2024-04-17
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PN1
DownloadVisualize
BU of 8pn1 by Molmil
CryoEM structure of Nal1 protein, allele SPIKE, from Oryza sativa japonica group
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-29
Release date:2024-04-17
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
5EGC
DownloadVisualize
BU of 5egc by Molmil
Structure of the Adeno-Associated Virus Serotype 1 sialic acid complex
Descriptor: Capsid protein, MAGNESIUM ION, N-acetyl-alpha-neuraminic acid
Authors:Huang, L.Y, Agbandje-McKenna, M.
Deposit date:2015-10-27
Release date:2016-03-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.011 Å)
Cite:Characterization of the Adeno-Associated Virus 1 and 6 Sialic Acid Binding Site.
J.Virol., 90, 2016
6N48
DownloadVisualize
BU of 6n48 by Molmil
Structure of beta2 adrenergic receptor bound to BI167107, Nanobody 6B9, and a positive allosteric modulator
Descriptor: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate, 8-[(1R)-2-{[1,1-dimethyl-2-(2-methylphenyl)ethyl]amino}-1-hydroxyethyl]-5-hydroxy-2H-1,4-benzoxazin-3(4H)-one, Camelid Antibody Fragment, ...
Authors:Liu, X, Masoudi, A, Kahsai, A.W, Huang, L.Y, Pani, B, Hirata, K, Ahn, S, Lefkowitz, R.J, Kobilka, B.K.
Deposit date:2018-11-17
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Mechanism of beta2AR regulation by an intracellular positive allosteric modulator.
Science, 364, 2019
5X8I
DownloadVisualize
BU of 5x8i by Molmil
Crystal structure of human CLK1 in complex with compound 25
Descriptor: 5-[1-[(1S)-1-(4-fluorophenyl)ethyl]-[1,2,3]triazolo[4,5-c]quinolin-8-yl]-1,3-benzoxazole, Dual specificity protein kinase CLK1
Authors:Sun, Q.Z, Lin, G.F, Li, L.L, Jin, X.T, Huang, L.Y, Zhang, G, Wei, Y.Q, Lu, G.W, Yang, S.Y.
Deposit date:2017-03-02
Release date:2017-08-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Discovery of Potent and Selective Inhibitors of Cdc2-Like Kinase 1 (CLK1) as a New Class of Autophagy Inducers
J. Med. Chem., 60, 2017
6J3P
DownloadVisualize
BU of 6j3p by Molmil
Crystal structure of the human GCN5 bromodomain in complex with compound (R,R)-36n
Descriptor: 2-{[(3R,5R)-5-(2,3-dihydro-1,4-benzodioxin-6-yl)-1-methylpiperidin-3-yl]amino}-3-methyl-3,5-dihydro-4H-pyrrolo[3,2-d]pyrimidin-4-one, Histone acetyltransferase KAT2A
Authors:Huang, L.Y, Li, H, Niu, L, Wu, C.Y, Yu, Y.M, Li, L.L, Yang, S.Y.
Deposit date:2019-01-05
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Discovery of Pyrrolo[3,2- d]pyrimidin-4-one Derivatives as a New Class of Potent and Cell-Active Inhibitors of P300/CBP-Associated Factor Bromodomain.
J.Med.Chem., 62, 2019
6J3O
DownloadVisualize
BU of 6j3o by Molmil
Crystal structure of the human PCAF bromodomain in complex with compound 12
Descriptor: 3-methyl-2-[[(3~{R})-1-methylpiperidin-3-yl]amino]-5~{H}-pyrrolo[3,2-d]pyrimidin-4-one, Histone acetyltransferase KAT2B
Authors:Huang, L.Y, Li, H, Li, L.L, Niu, L, Seupel, R, Wu, C.Y, Li, G.B, Yu, Y.M, Brennan, P.E, Yang, S.Y.
Deposit date:2019-01-05
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Discovery of Pyrrolo[3,2- d]pyrimidin-4-one Derivatives as a New Class of Potent and Cell-Active Inhibitors of P300/CBP-Associated Factor Bromodomain.
J.Med.Chem., 62, 2019
4JQI
DownloadVisualize
BU of 4jqi by Molmil
Structure of active beta-arrestin1 bound to a G protein-coupled receptor phosphopeptide
Descriptor: 1,2-ETHANEDIOL, Beta-arrestin-1, CHLORIDE ION, ...
Authors:Shukla, A.K, Manglik, A, Kruse, A.C, Xiao, K, Reis, R.I, Tseng, W.C, Staus, D.P, Hilger, D, Uysal, S, Huang, L.H, Paduch, M, Shukla, P.T, Koide, A, Koide, S, Weis, W.I, Kossiakoff, A.A, Kobilka, B.K, Lefkowitz, R.J.
Deposit date:2013-03-20
Release date:2013-04-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of active beta-arrestin-1 bound to a G-protein-coupled receptor phosphopeptide.
Nature, 497, 2013
6NI2
DownloadVisualize
BU of 6ni2 by Molmil
Stabilized beta-arrestin 1-V2T subcomplex of a GPCR-G protein-beta-arrestin mega-complex
Descriptor: Beta-arrestin-1, Fab30 Heavy Chain, Fab30 Light Chain, ...
Authors:Nguyen, A.H, Thomsen, A.R.B, Cahill, T.J, des Georges, A, Lefkowitz, R.J.
Deposit date:2018-12-26
Release date:2019-11-20
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of an endosomal signaling GPCR-G protein-beta-arrestin megacomplex.
Nat.Struct.Mol.Biol., 26, 2019
6NI3
DownloadVisualize
BU of 6ni3 by Molmil
B2V2R-Gs protein subcomplex of a GPCR-G protein-beta-arrestin mega-complex
Descriptor: 8-[(1R)-2-{[1,1-dimethyl-2-(2-methylphenyl)ethyl]amino}-1-hydroxyethyl]-5-hydroxy-2H-1,4-benzoxazin-3(4H)-one, Endolysin,Beta-2 adrenergic receptor chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Nguyen, A.H, Thomsen, A.R.B, Cahill, T.J, des Georges, A, Lefkowitz, R.J.
Deposit date:2018-12-26
Release date:2019-11-20
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of an endosomal signaling GPCR-G protein-beta-arrestin megacomplex.
Nat.Struct.Mol.Biol., 26, 2019
5LY0
DownloadVisualize
BU of 5ly0 by Molmil
Crystal structure of LOB domain of Ramosa2 from Wheat
Descriptor: LOB family transfactor Ramosa2.1, ZINC ION
Authors:Wei, X.-B, Zhang, B, Chen, W.-F, Fan, S.-H, Rety, S, Xi, X.-G.
Deposit date:2016-09-23
Release date:2017-10-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.877 Å)
Cite:Structural analysis reveals a "molecular calipers" mechanism for a LATERAL ORGAN BOUNDARIES DOMAIN transcription factor protein from wheat.
J. Biol. Chem., 294, 2019
8PO7
DownloadVisualize
BU of 8po7 by Molmil
Structure of Escherichia coli HrpA in complex with ADP and dinucleotide dCdC
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase HrpA, DNA (5'-D(P*CP*C)-3'), ...
Authors:Xin, B.G, Yuan, L.G, Zhang, L.L, Xie, S.M, Liu, N.N, Ai, X, Li, H.H, Rety, S, Xi, X.G.
Deposit date:2023-07-03
Release date:2024-05-08
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural insights into the N-terminal APHB domain of HrpA: mediating canonical and i-motif recognition.
Nucleic Acids Res., 52, 2024
8PO8
DownloadVisualize
BU of 8po8 by Molmil
Structure of Escherichia coli HrpA in complex with ADP and oligonucleotide poly(dC)11 forming an i-motif
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase HrpA, DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*C)-3'), ...
Authors:Xin, B.G, Yuan, L.G, Zhang, L.L, Xie, S.M, Liu, N.N, Ai, X, Li, H.H, Rety, S, Xi, X.G.
Deposit date:2023-07-03
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structural insights into the N-terminal APHB domain of HrpA: mediating canonical and i-motif recognition.
Nucleic Acids Res., 52, 2024
8PO6
DownloadVisualize
BU of 8po6 by Molmil
Structure of Escherichia coli HrpA apo form
Descriptor: ATP-dependent RNA helicase HrpA, PHOSPHATE ION
Authors:Xin, B.G, Yuan, L.G, Zhang, L.L, Xie, S.M, Liu, N.N, Ai, X, Li, H.H, Rety, S, Xi, X.G.
Deposit date:2023-07-03
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structural insights into the N-terminal APHB domain of HrpA: mediating canonical and i-motif recognition.
Nucleic Acids Res., 52, 2024

226707

數據於2024-10-30公開中

PDB statisticsPDBj update infoContact PDBjnumon