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5BWD
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BU of 5bwd by Molmil
Benzylsuccinate alpha-gamma bound to fumarate
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FUMARIC ACID, TETRAETHYLENE GLYCOL, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-06-07
Release date:2015-08-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Substrate-bound Structures of Benzylsuccinate Synthase Reveal How Toluene Is Activated in Anaerobic Hydrocarbon Degradation.
J.Biol.Chem., 290, 2015
8VHQ
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BU of 8vhq by Molmil
Crystal structure of E. coli class Ia ribonucleotide reductase alpha subunit W28A variant bound to dATP and ATP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Funk, M.A, Zimanyi, C.M, Drennan, C.L.
Deposit date:2024-01-02
Release date:2024-09-04
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase.
Biochemistry, 2024
8VHO
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BU of 8vho by Molmil
Crystal Structure of E. coli class Ia ribonucleotide reductase alpha subunit bound to dATP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Funk, M.A, Zimanyi, C.M, Drennan, C.L.
Deposit date:2024-01-02
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.548 Å)
Cite:How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase.
Biochemistry, 2024
8VHR
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BU of 8vhr by Molmil
Crystal structure of E. coli class Ia ribonucleotide reductase alpha subunit W28A variant bound to dATP and GTP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Funk, M.A, Zimanyi, C.M, Drennan, C.L.
Deposit date:2024-01-02
Release date:2024-09-04
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase.
Biochemistry, 2024
8VHP
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BU of 8vhp by Molmil
Crystal structure of E. coli class Ia ribonucleotide reductase alpha subunit W28A variant bound to CDP and two molecules of ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Funk, M.A, Zimanyi, C.M, Drennan, C.L.
Deposit date:2024-01-02
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.608 Å)
Cite:How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase.
Biochemistry, 2024
8VHN
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BU of 8vhn by Molmil
Crystal Structure of E. coli class Ia ribonucleotide reductase alpha subunit bound to two ATP molecules
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Funk, M.A, Zimanyi, C.M, Drennan, C.L.
Deposit date:2024-01-02
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase.
Biochemistry, 2024
8VHU
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BU of 8vhu by Molmil
Crystal structure of dATP bound E. coli class Ia ribonucleotide reductase alpha construct fused with the C-terminal tail of E. coli class Ia beta subunit
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CHLORIDE ION, Fusion protein of Ribonucleoside-diphosphate reductase 1 subunits alpha and beta, ...
Authors:Funk, M.A, Zimanyi, C.M, Drennan, C.L.
Deposit date:2024-01-02
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase.
Biochemistry, 2024
4PKF
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BU of 4pkf by Molmil
Benzylsuccinate synthase alpha-beta-gamma complex
Descriptor: CHLORIDE ION, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2014-05-14
Release date:2014-07-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structures of benzylsuccinate synthase elucidate roles of accessory subunits in glycyl radical enzyme activation and activity.
Proc.Natl.Acad.Sci.USA, 111, 2014
4PKC
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BU of 4pkc by Molmil
Benzylsuccinate alpha-gamma complex
Descriptor: CHLORIDE ION, GLYCEROL, TutD, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2014-05-14
Release date:2014-07-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of benzylsuccinate synthase elucidate roles of accessory subunits in glycyl radical enzyme activation and activity.
Proc.Natl.Acad.Sci.USA, 111, 2014
5BWE
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BU of 5bwe by Molmil
Benzylsuccinate synthase alpha-beta-gamma complex with bound toluene and fumarate
Descriptor: FUMARIC ACID, IRON/SULFUR CLUSTER, TOLUENE, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-06-07
Release date:2015-08-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Substrate-bound Structures of Benzylsuccinate Synthase Reveal How Toluene Is Activated in Anaerobic Hydrocarbon Degradation.
J.Biol.Chem., 290, 2015
5CI3
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BU of 5ci3 by Molmil
Ribonucleotide reductase Y122 2,3,5-F3Y variant
Descriptor: MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1 subunit beta, SULFATE ION
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-07-10
Release date:2016-07-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: E. coli Ribonucleotide Reductase As an Example.
J.Am.Chem.Soc., 138, 2016
5CI2
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BU of 5ci2 by Molmil
Ribonucleotide reductase Y122 2,3,6-F3Y variant
Descriptor: MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1 subunit beta, SULFATE ION
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-07-10
Release date:2016-06-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: E. coli Ribonucleotide Reductase As an Example.
J.Am.Chem.Soc., 138, 2016
5CI1
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BU of 5ci1 by Molmil
Ribonucleotide reductase Y122 2,3-F2Y variant
Descriptor: CHLORIDE ION, MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-07-10
Release date:2016-06-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: E. coli Ribonucleotide Reductase As an Example.
J.Am.Chem.Soc., 138, 2016
5CI0
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BU of 5ci0 by Molmil
Ribonucleotide reductase Y122 3,5-F2Y variant
Descriptor: MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1, beta subunit, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-07-10
Release date:2016-06-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: E. coli Ribonucleotide Reductase As an Example.
J.Am.Chem.Soc., 138, 2016
4U3E
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BU of 4u3e by Molmil
Anaerobic ribonucleotide reductase
Descriptor: ACETATE ION, CITRIC ACID, GLYCEROL, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2014-07-20
Release date:2014-09-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:The class III ribonucleotide reductase from Neisseria bacilliformis can utilize thioredoxin as a reductant.
Proc.Natl.Acad.Sci.USA, 111, 2014
6ND3
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BU of 6nd3 by Molmil
wild-type choline TMA lyase in complex with betaine aldehyde
Descriptor: BETAINE ALDEHYDE, Choline trimethylamine-lyase
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2018-12-13
Release date:2019-01-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.364 Å)
Cite:Structure-Guided Identification of a Small Molecule That Inhibits Anaerobic Choline Metabolism by Human Gut Bacteria.
J.Am.Chem.Soc., 141, 2019
5KDP
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BU of 5kdp by Molmil
E491A mutant of choline TMA-lyase
Descriptor: Choline trimethylamine-lyase, MALONATE ION, SODIUM ION
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2016-06-08
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase.
Cell Chem Biol, 23, 2016
3D7M
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BU of 3d7m by Molmil
Crystal Structure of the G Protein Fast-Exchange Double Mutant I56C/Q333C
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i), alpha-1 subunit, ...
Authors:Funk, M.A, Preininger, A.M, Oldham, W.M, Meier, S.M, Hamm, H.E, Iverson, T.M.
Deposit date:2008-05-21
Release date:2009-03-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Helix dipole movement and conformational variability contribute to allosteric GDP release in Galphai subunits.
Biochemistry, 48, 2009
5FAV
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BU of 5fav by Molmil
E491Q mutant of choline TMA-lyase
Descriptor: Choline trimethylamine-lyase, MALONATE ION, SODIUM ION
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-12-12
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase.
Cell Chem Biol, 23, 2016
5FAY
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BU of 5fay by Molmil
Y208F mutant of choline TMA-lyase
Descriptor: CHOLINE ION, Choline trimethylamine-lyase, MALONATE ION, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-12-12
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase.
Cell Chem Biol, 23, 2016
5FAW
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BU of 5faw by Molmil
T502A mutant of choline TMA-lyase
Descriptor: CHOLINE ION, Choline trimethylamine-lyase, MALONATE ION, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-12-12
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.852 Å)
Cite:Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase.
Cell Chem Biol, 23, 2016
5FAU
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BU of 5fau by Molmil
wild-type choline TMA lyase in complex with choline
Descriptor: CHOLINE ION, Choline trimethylamine-lyase, GLYCEROL
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-12-12
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase.
Cell Chem Biol, 23, 2016
5CI4
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BU of 5ci4 by Molmil
Ribonucleotide reductase beta subunit
Descriptor: MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1, beta subunit, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-07-10
Release date:2016-06-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: E. coli Ribonucleotide Reductase As an Example.
J.Am.Chem.Soc., 138, 2016
5CNS
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BU of 5cns by Molmil
Crystal structure of the dATP inhibited E. coli class Ia ribonucleotide reductase complex bound to CDP and dATP at 2.97 Angstroms resolution
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, CYTIDINE-5'-DIPHOSPHATE, ...
Authors:Chen, P.Y.-T, Zimanyi, C.M, Funk, M.A, Drennan, C.L.
Deposit date:2015-07-18
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.975 Å)
Cite:Molecular basis for allosteric specificity regulation in class Ia ribonucleotide reductase from Escherichia coli.
Elife, 5, 2016
5CNT
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BU of 5cnt by Molmil
Crystal structure of the dATP inhibited E. coli class Ia ribonucleotide reductase complex bound to UDP and dATP at 3.25 Angstroms resolution
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MAGNESIUM ION, MU-OXO-DIIRON, ...
Authors:Chen, P.Y.-T, Zimanyi, C.M, Funk, M.A, Drennan, C.L.
Deposit date:2015-07-18
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Molecular basis for allosteric specificity regulation in class Ia ribonucleotide reductase from Escherichia coli.
Elife, 5, 2016

 

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數據於2024-10-02公開中

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