Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6EM5
DownloadVisualize
BU of 6em5 by Molmil
State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
Descriptor: 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 25S ribosomal RNA, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, ...
Authors:Kater, L, Cheng, J, Barrio-Garcia, C, Hurt, E, Beckmann, R.
Deposit date:2017-10-01
Release date:2017-12-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6E0W
DownloadVisualize
BU of 6e0w by Molmil
Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid
Descriptor: 1,2-ETHANEDIOL, 4,6-O-[(1R)-1-carboxyethylidene]-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-alpha-D-galactopyranose-(1-3)-alpha-L-fucopyranose-(1-4)-alpha-L-fucopyranose-(1-3)-beta-D-glucopyranose, Bacteriophage Phi92 gp150, ...
Authors:Plattner, M, Browning, C, Gerardy-Schahn, R, Shneider, M.M, Leiman, P.G, Schwarzer, D.
Deposit date:2018-07-07
Release date:2019-07-17
Last modified:2025-04-16
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid
To Be Published
6ET8
DownloadVisualize
BU of 6et8 by Molmil
Crystal structure of AlbA in complex with albicidin
Descriptor: Albicidin resistance protein, SULFATE ION, albicidin
Authors:Driller, R, Rostock, L, Alings, C, Graetz, S, Suessmuth, R, Mainz, A, Wahl, M.C, Loll, B.
Deposit date:2017-10-25
Release date:2018-08-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular insights into antibiotic resistance - how a binding protein traps albicidin.
Nat Commun, 9, 2018
6ETJ
DownloadVisualize
BU of 6etj by Molmil
HUMAN PFKFB3 IN COMPLEX WITH KAN0438241
Descriptor: 4-[[3-(5-fluoranyl-2-oxidanyl-phenyl)phenyl]sulfonylamino]-2-oxidanyl-benzoic acid, 6-O-phosphono-beta-D-fructofuranose, 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3, ...
Authors:Gustafsson, N.M.S, Lundback, T, Farnegardh, K, Groth, P, Wiitta, E, Jonsson, M, Hallberg, K, Pennisi, R, Huguet Ninou, A, Martinsson, J, Norstrom, C, Schultz, J, Andersson, M, Markova, N, Marttila, P, Norin, M, Olin, T, Helleday, T.
Deposit date:2017-10-26
Release date:2018-11-07
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Targeting PFKFB3 radiosensitizes cancer cells and suppresses homologous recombination.
Nat Commun, 9, 2018
6EXJ
DownloadVisualize
BU of 6exj by Molmil
PDZ domain from rat Shank3 bound to the C terminus of somatostatin receptor subtype 2
Descriptor: SH3 and multiple ankyrin repeat domains protein 3, SSTR2
Authors:Ponna, S.K, Keller, C, Ruskamo, S, Myllykoski, M, Boeckers, T.M, Kursula, P.
Deposit date:2017-11-08
Release date:2018-03-07
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for PDZ domain interactions in the post-synaptic density scaffolding protein Shank3.
J. Neurochem., 145, 2018
6F2O
DownloadVisualize
BU of 6f2o by Molmil
Crystal structure of mouse SALM5 adhesion protein extracellular LRR-Ig domain fragment
Descriptor: Leucine-rich repeat and fibronectin type-III domain-containing protein 5
Authors:Karki, S, Paudel, P, Sele, C, Kajander, T.
Deposit date:2017-11-25
Release date:2018-06-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of SALM5 suggests a dimeric assembly for the presynaptic RPTP ligand recognition.
Protein Eng. Des. Sel., 31, 2018
6F2V
DownloadVisualize
BU of 6f2v by Molmil
Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) in complex with AMP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE MONOPHOSPHATE, ...
Authors:Dohler, C, Zebisch, M, Strater, N.
Deposit date:2017-11-27
Release date:2018-08-01
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure and substrate binding mode of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3).
Sci Rep, 8, 2018
6F22
DownloadVisualize
BU of 6f22 by Molmil
Complex between MTH1 and compound 29 (a 4-amino-2,7-diazaindole derivative)
Descriptor: (3~{S})-3-phenyl-4-(2~{H}-pyrazolo[3,4-b]pyridin-4-yl)morpholine, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION
Authors:Viklund, J, Talagas, A, Tresaugues, L, Andersson, M, Ericsson, U, Forsblom, R, Ginman, T, Hallberg, K, Lindstrom, J, Persson, L, Silvander, C, Rahm, F.
Deposit date:2017-11-23
Release date:2018-03-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Creation of a Novel Class of Potent and Selective MutT Homologue 1 (MTH1) Inhibitors Using Fragment-Based Screening and Structure-Based Drug Design.
J. Med. Chem., 61, 2018
6F30
DownloadVisualize
BU of 6f30 by Molmil
Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) in complex with UDPGlcNAc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Dohler, C, Zebisch, M, Strater, N.
Deposit date:2017-11-27
Release date:2018-08-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure and substrate binding mode of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3).
Sci Rep, 8, 2018
6F4B
DownloadVisualize
BU of 6f4b by Molmil
Crystal structure of Glutathione Transferase Omega 3S from Trametes versicolor in complex with glutathione
Descriptor: GLUTATHIONE, GLYCEROL, Glutathione transferase
Authors:Schwartz, M, Favier, F, Didierjean, C.
Deposit date:2017-11-29
Release date:2018-06-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Molecular recognition of wood polyphenols by phase II detoxification enzymes of the white rot Trametes versicolor.
Sci Rep, 8, 2018
6F6A
DownloadVisualize
BU of 6f6a by Molmil
Crystal structure of glutathione transferase Omega 3S from Trametes versicolor in complex with dihydrowogonin from wild-cherry extract
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLUTATHIONE, ...
Authors:Schwartz, M, Favier, F, Didierjean, C.
Deposit date:2017-12-05
Release date:2018-06-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular recognition of wood polyphenols by phase II detoxification enzymes of the white rot Trametes versicolor.
Sci Rep, 8, 2018
6PED
DownloadVisualize
BU of 6ped by Molmil
Crystal structure of HEMK2-TRMT112 complex
Descriptor: Methyltransferase N6AMT1, Multifunctional methyltransferase subunit TRM112-like protein, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Dong, C, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2019-06-20
Release date:2019-07-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of HEMK2-TRMT112 complex
To Be Published
6F2S
DownloadVisualize
BU of 6f2s by Molmil
CryoEM structure of Ageratum Yellow Vein virus (AYVV)
Descriptor: Capsid protein, coat protein subunit H, coat protein subunit I, ...
Authors:Hesketh, E.L, Saunders, K, Fisher, C, Potze, J, Stanley, J, Lomonossoff, G.P, Ranson, N.A.
Deposit date:2017-11-27
Release date:2018-06-27
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The 3.3 angstrom structure of a plant geminivirus using cryo-EM.
Nat Commun, 9, 2018
6EZU
DownloadVisualize
BU of 6ezu by Molmil
Schistosoma mansoni Phosphodiesterase 4A
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Brown, D.G, Schroeder, S, Gil, C.
Deposit date:2017-11-16
Release date:2018-12-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The structure of Schistosoma mansoni Phosphodiesterase 4A in complex with cAMP
To Be Published
6F4F
DownloadVisualize
BU of 6f4f by Molmil
Crystal structure of glutathione transferase Omega 3S from Trametes versicolor in complex with glutathionyl-S-dinitrobenzene
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLUTATHIONE S-(2,4 DINITROBENZENE), ...
Authors:Schwartz, M, Favier, F, Didierjean, C.
Deposit date:2017-11-29
Release date:2018-06-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Molecular recognition of wood polyphenols by phase II detoxification enzymes of the white rot Trametes versicolor.
Sci Rep, 8, 2018
6F1T
DownloadVisualize
BU of 6f1t by Molmil
Cryo-EM structure of two dynein tail domains bound to dynactin and BICDR1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ARP1 actin related protein 1 homolog A, ...
Authors:Urnavicius, L, Lau, C.K, Elshenawy, M.M, Morales-Rios, E, Motz, C, Yildiz, A, Carter, A.P.
Deposit date:2017-11-23
Release date:2018-01-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM shows how dynactin recruits two dyneins for faster movement.
Nature, 554, 2018
6F68
DownloadVisualize
BU of 6f68 by Molmil
Crystal structure glutathione transferase Omega 3S from Trametes versicolor in complex with 2,4,4'-trihydroxybenzophenone
Descriptor: (2,4-dihydroxyphenyl)(4-hydroxyphenyl)methanone, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Schwartz, M, Favier, F, Didierjean, C.
Deposit date:2017-12-05
Release date:2018-06-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.696 Å)
Cite:Molecular recognition of wood polyphenols by phase II detoxification enzymes of the white rot Trametes versicolor.
Sci Rep, 8, 2018
6F71
DownloadVisualize
BU of 6f71 by Molmil
Crystal structure of glutathione transferase Omega 6S from Trametes versicolor in complex with naringenin
Descriptor: R-naringenin, glutathione transferase
Authors:Schwartz, M, Favier, F, Didierjean, C.
Deposit date:2017-12-07
Release date:2018-06-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Molecular recognition of wood polyphenols by phase II detoxification enzymes of the white rot Trametes versicolor.
Sci Rep, 8, 2018
6EZB
DownloadVisualize
BU of 6ezb by Molmil
Crystal Structure of human tRNA-dihydrouridine(20) synthase catalytic domain Q305K mutant
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, SULFATE ION, ...
Authors:Bou-Nader, C, Bregeon, D, Pecqueur, L, Fontecave, M, Hamdane, D.
Deposit date:2017-11-14
Release date:2018-09-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Electrostatic Potential in the tRNA Binding Evolution of Dihydrouridine Synthases.
Biochemistry, 57, 2018
6F08
DownloadVisualize
BU of 6f08 by Molmil
14-3-3 zeta in complex with the human Son of sevenless homolog 1 (SOS1)
Descriptor: 14-3-3 protein zeta/delta, PENTAETHYLENE GLYCOL, Son of sevenless homolog 1
Authors:Ballone, A, Centorrino, F, Ottmann, C, Guo, S, Leysen, S.
Deposit date:2017-11-17
Release date:2018-02-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural characterization of 14-3-3 zeta in complex with the human Son of sevenless homolog 1 (SOS1).
J. Struct. Biol., 202, 2018
6EXV
DownloadVisualize
BU of 6exv by Molmil
Structure of mammalian RNA polymerase II elongation complex inhibited by Alpha-amanitin
Descriptor: AMATOXIN, DNA (25-MER), DNA (36-MER), ...
Authors:Liu, X, Farnung, L, Wigge, C, Cramer, P.
Deposit date:2017-11-09
Release date:2018-03-21
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of a mammalian RNA polymerase II elongation complex inhibited by alpha-amanitin.
J. Biol. Chem., 293, 2018
6EZA
DownloadVisualize
BU of 6eza by Molmil
Crystal Structure of human tRNA-dihydrouridine(20) synthase catalytic domain E294K mutant
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Bou-Nader, C, Bregeon, D, Pecqueur, L, Vincent, G, Fontecave, M, Hamdane, D.
Deposit date:2017-11-14
Release date:2018-09-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Electrostatic Potential in the tRNA Binding Evolution of Dihydrouridine Synthases.
Biochemistry, 57, 2018
6F2R
DownloadVisualize
BU of 6f2r by Molmil
A heterotetramer of human HspB2 and HspB3
Descriptor: Heat shock protein beta-2, Heat shock protein beta-3,Heat shock protein beta-3,Heat shock protein beta-3,Heat shock protein beta-3,Heat shock protein beta-2, HspB2,Heat shock protein beta-2,Heat shock protein beta-2,Heat shock protein beta-2,Heat shock protein beta-2,Heat shock protein beta-2, ...
Authors:Clark, A.R, Cole, A.R, Boelens, W.C, Keep, N.H, Slingsby, C.
Deposit date:2017-11-27
Release date:2018-07-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Terminal Regions Confer Plasticity to the Tetrameric Assembly of Human HspB2 and HspB3.
J.Mol.Biol., 430, 2018
6F3A
DownloadVisualize
BU of 6f3a by Molmil
Cryo-EM structure of a single dynein tail domain bound to dynactin and BICD2N
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ARP1 actin related protein 1 homolog A, ...
Authors:Urnavicius, L, Lau, C.K, Elshenawy, M.M, Morales-Rios, E, Motz, C, Yildiz, A, Carter, A.P.
Deposit date:2017-11-28
Release date:2018-01-17
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Cryo-EM shows how dynactin recruits two dyneins for faster movement.
Nature, 554, 2018
6ZBK
DownloadVisualize
BU of 6zbk by Molmil
Crystal structure of the human complex between RPAP3 and TRBP
Descriptor: RISC-loading complex subunit TARBP2, RNA polymerase II-associated protein 3
Authors:Charron, C, Abel, Y, Charpentier, B, Rederstorff, M.
Deposit date:2020-06-08
Release date:2021-06-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:The interaction between RPAP3 and TRBP reveals a possible involvement of the HSP90/R2TP chaperone complex in the regulation of miRNA activity.
Nucleic Acids Res., 50, 2022

238582

數據於2025-07-09公開中

PDB statisticsPDBj update infoContact PDBjnumon