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6GQV
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BU of 6gqv by Molmil
Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Pellegrino, S, Yusupov, M, Yusupova, G, Hashem, Y.
Deposit date:2018-06-08
Release date:2018-07-11
Last modified:2018-08-08
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance.
J. Mol. Biol., 430, 2018
7VUT
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BU of 7vut by Molmil
Crystal structure of AlleyCat10
Descriptor: AlleyCat10, CALCIUM ION
Authors:Tame, J.R.H, Korendovych, I.V, Margheritis, E, Takahashi, K.
Deposit date:2021-11-04
Release date:2022-07-27
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:NMR-guided directed evolution.
Nature, 610, 2022
7VUS
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BU of 7vus by Molmil
Crystal structure of AlleyCat9 with 5-nitro-benzotriazole
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-nitro-1H-benzotriazole, AlleyCat, ...
Authors:Tame, J.R.H, Korendovych, I.V, Margheritis, E, Takahashi, K.
Deposit date:2021-11-04
Release date:2022-07-27
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:NMR-guided directed evolution.
Nature, 610, 2022
7VUU
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BU of 7vuu by Molmil
Crystal structure of AlleyCat10 with inhibitor
Descriptor: 5-nitro-1H-benzotriazole, AlleyCat, CALCIUM ION
Authors:Tame, J.R.H, Korendovych, I.V, Margheritis, E, Takahashi, K.
Deposit date:2021-11-04
Release date:2022-07-27
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:NMR-guided directed evolution.
Nature, 610, 2022
8BKE
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BU of 8bke by Molmil
Crystal structure of the Klebsiella phage KP34p57 capsular depolymerase
Descriptor: Uncharacterized protein 57
Authors:Berisio, R, Squeglia, F.
Deposit date:2022-11-09
Release date:2023-08-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Klebsiella phage KP34gp57 capsular depolymerase structure and function: from a serendipitous finding to the design of active mini-enzymes against K. pneumoniae.
Mbio, 14, 2023
6N4T
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BU of 6n4t by Molmil
Crystal structure of Matriptase1 in complex with a peptidomimetic benzothiazole
Descriptor: ETHANOL, GLUTATHIONE, MAGNESIUM ION, ...
Authors:Campobasso, N.
Deposit date:2018-11-20
Release date:2019-10-02
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.945 Å)
Cite:Discovery and Development of TMPRSS6 Inhibitors Modulating Hepcidin Levels in Human Hepatocytes.
Cell Chem Biol, 26, 2019
6WQN
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BU of 6wqn by Molmil
Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Belousoff, M.J.
Deposit date:2020-04-29
Release date:2020-06-03
Last modified:2020-12-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Characterization of the Core Ribosomal Binding Region for the Oxazolidone Family of Antibiotics Using Cryo-EM.
Acs Pharmacol Transl Sci, 3, 2020
6WQQ
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BU of 6wqq by Molmil
Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, radezolid
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Belousoff, M.J.
Deposit date:2020-04-29
Release date:2020-06-03
Last modified:2020-12-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Characterization of the Core Ribosomal Binding Region for the Oxazolidone Family of Antibiotics Using Cryo-EM.
Acs Pharmacol Transl Sci, 3, 2020
6WRU
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BU of 6wru by Molmil
Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Belousoff, M.J.
Deposit date:2020-04-30
Release date:2020-06-03
Last modified:2020-12-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Characterization of the Core Ribosomal Binding Region for the Oxazolidone Family of Antibiotics Using Cryo-EM.
Acs Pharmacol Transl Sci, 3, 2020
6WRS
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BU of 6wrs by Molmil
Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Belousoff, M.J.
Deposit date:2020-04-30
Release date:2020-06-03
Last modified:2020-12-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Characterization of the Core Ribosomal Binding Region for the Oxazolidone Family of Antibiotics Using Cryo-EM.
Acs Pharmacol Transl Sci, 3, 2020
6TQM
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BU of 6tqm by Molmil
Escherichia coli AdhE structure in its compact conformation
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Aldehyde-alcohol dehydrogenase, FE (III) ION
Authors:Fronzes, R, Pony, P.
Deposit date:2019-12-16
Release date:2020-06-03
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Filamentation of the bacterial bi-functional alcohol/aldehyde dehydrogenase AdhE is essential for substrate channeling and enzymatic regulation.
Nat Commun, 11, 2020
6GXK
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BU of 6gxk by Molmil
Crystal structure of Aldo-Keto Reductase 1C3 (AKR1C3) complexed with inhibitor.
Descriptor: 1,2-ETHANEDIOL, 4-[[1-(4-chlorophenyl)carbonyl-5-methoxy-2-methyl-indol-3-yl]methyl]-1,2,5-oxadiazol-3-one, Aldo-keto reductase family 1 member C3, ...
Authors:Goyal, P, Wahlgren, W.Y, Friemann, R.
Deposit date:2018-06-27
Release date:2019-05-08
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Bioisosteres of Indomethacin as Inhibitors of Aldo-Keto Reductase 1C3.
Acs Med.Chem.Lett., 10, 2019
6IZN
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BU of 6izn by Molmil
Crystal structure of the PPARgamma-LBD complexed with compound 3g
Descriptor: 3-[[6-(2,6-dimethylpyridin-3-yl)oxy-7-fluoranyl-1-methyl-benzimidazol-2-yl]methoxy]benzoic acid, Peptide from Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, Peroxisome proliferator-activated receptor gamma
Authors:Matsui, Y, Hanzawa, H.
Deposit date:2018-12-20
Release date:2019-03-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure-Activity Relationship Studies of 3- or 4-Pyridine Derivatives of DS-6930.
Acs Med.Chem.Lett., 10, 2019
6GL1
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BU of 6gl1 by Molmil
HLA-E*01:03 in complex with the HIV epitope, RL9HIV
Descriptor: ARG-MET-TYR-SER-PRO-THR-SER-ILE-LEU, Beta-2-microglobulin, MHC class I antigen, ...
Authors:Walters, L.C, Gillespie, G.M, McMichael, A.J, Rozbesky, D, Jones, E.Y, Harlos, K.
Deposit date:2018-05-22
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.623 Å)
Cite:Pathogen-derived HLA-E bound epitopes reveal broad primary anchor pocket tolerability and conformationally malleable peptide binding.
Nat Commun, 9, 2018
6V65
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BU of 6v65 by Molmil
Crystal structure of KRAS(GMPPNP)-NF1(GRD)-SPRED1 complex
Descriptor: FORMIC ACID, GTPase KRas, MAGNESIUM ION, ...
Authors:Yan, W, Simanshu, D.K.
Deposit date:2019-12-04
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.763 Å)
Cite:Structural Insights into the SPRED1-Neurofibromin-KRAS Complex and Disruption of SPRED1-Neurofibromin Interaction by Oncogenic EGFR.
Cell Rep, 32, 2020
7NE9
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BU of 7ne9 by Molmil
A single sensor controls large variations in zinc quotas in a marine cyanobacterium
Descriptor: ACETATE ION, Ferric uptake regulator family, ZINC ION
Authors:Fulop, V.
Deposit date:2021-02-03
Release date:2022-03-02
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A single sensor controls large variations in zinc quotas in a marine cyanobacterium.
Nat.Chem.Biol., 18, 2022
6IZM
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BU of 6izm by Molmil
Crystal structure of the PPARgamma-LBD complexed with compound 1l
Descriptor: 3-[[6-(2,6-dimethylpyridin-3-yl)oxy-1-methyl-benzimidazol-2-yl]methoxy]benzoic acid, Peptide from Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, Peroxisome proliferator-activated receptor gamma
Authors:Matsui, Y, Hanzawa, H.
Deposit date:2018-12-20
Release date:2019-03-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-Activity Relationship Studies of 3- or 4-Pyridine Derivatives of DS-6930.
Acs Med.Chem.Lett., 10, 2019
6V6F
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BU of 6v6f by Molmil
Crystal structure of Q61L KRAS(GMPPNP)-NF1(GRD)-SPRED1(EVH1) complex
Descriptor: FORMIC ACID, GTPase KRas, MAGNESIUM ION, ...
Authors:Yan, W, Simanshu, D.K.
Deposit date:2019-12-05
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.542 Å)
Cite:Structural Insights into the SPRED1-Neurofibromin-KRAS Complex and Disruption of SPRED1-Neurofibromin Interaction by Oncogenic EGFR.
Cell Rep, 32, 2020
8BEI
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BU of 8bei by Molmil
Structure of hexameric subcomplexes (Truncation Delta2-6) of the fractal citrate synthase from Synechococcus elongatus PCC7942
Descriptor: Citrate synthase
Authors:Lo, Y.K, Bohn, S, Sendker, F.L, Schuller, J.M, Hochberg, G.
Deposit date:2022-10-21
Release date:2024-02-28
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Evolution of a protein Sierpinski fractal
To Be Published
8CEI
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BU of 8cei by Molmil
Succinyl-CoA Reductase from Clostridium kluyveri (SucD)
Descriptor: Succinate-semialdehyde dehydrogenase (acetylating)
Authors:Pfister, P, Diehl, C, Erb, T.J.
Deposit date:2023-02-02
Release date:2023-05-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Enhancing the Substrate Specificity of Clostridium Succinyl-CoA Reductase for Synthetic Biology and Biocatalysis.
Biochemistry, 62, 2023
8CEJ
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BU of 8cej by Molmil
Succinyl-CoA Reductase from Clostridium kluyveri (SucD) with Mesaconyl-C1-CoA
Descriptor: (2E)-2-METHYLBUT-2-ENEDIOIC ACID, Mesaconyl Coenzme A, Succinate-semialdehyde dehydrogenase (acetylating)
Authors:Pfister, P, Diehl, C, Erb, T.J.
Deposit date:2023-02-02
Release date:2023-05-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Enhancing the Substrate Specificity of Clostridium Succinyl-CoA Reductase for Synthetic Biology and Biocatalysis.
Biochemistry, 62, 2023
8CEK
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BU of 8cek by Molmil
Succinyl-CoA Reductase from Clostridium kluyveri (SucD) with NADPH
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Succinate-semialdehyde dehydrogenase (acetylating)
Authors:Pfister, P, Diehl, C, Erb, T.J.
Deposit date:2023-02-02
Release date:2023-05-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Enhancing the Substrate Specificity of Clostridium Succinyl-CoA Reductase for Synthetic Biology and Biocatalysis.
Biochemistry, 62, 2023
8CIL
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BU of 8cil by Molmil
Crystal structure of Coxiella burnetii Fic protein 2
Descriptor: Fic family protein
Authors:Hoepfner, D, Itzen, A, Pogenberg, V.
Deposit date:2023-02-10
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:The DNA-binding induced (de)AMPylation activity of a Coxiella burnetii Fic enzyme targets Histone H3.
Commun Biol, 6, 2023
6RMN
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BU of 6rmn by Molmil
DNA mismatch repair proteins MLH1 and MLH3
Descriptor: DNA mismatch repair protein MLH1, DNA mismatch repair protein MLH3, ZINC ION
Authors:Dai, J, Chervy, P, Legrand, P, Ropars, V, Charbonnier, J.B.
Deposit date:2019-05-07
Release date:2021-05-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular basis of the dual role of the Mlh1-Mlh3 endonuclease in MMR and in meiotic crossover formation.
Proc.Natl.Acad.Sci.USA, 118, 2021
8QYE
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BU of 8qye by Molmil
Catalytic core of endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum (EngBF) concieved by deep network hallucination: dEngBF4
Descriptor: 1,2-ETHANEDIOL, ENDO-ALPHA-N-ACETYLGALACTOSAMINIDASE
Authors:Aghajari, N.
Deposit date:2023-10-25
Release date:2024-03-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Carving out a Glycoside Hydrolase Active Site for Incorporation into a New Protein Scaffold Using Deep Network Hallucination.
Acs Synth Biol, 13, 2024

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數據於2024-07-10公開中

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