Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6ROJ
DownloadVisualize
BU of 6roj by Molmil
Cryo-EM structure of the activated Drs2p-Cdc50p
Descriptor: (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cell division control protein 50, ...
Authors:Timcenko, M, Lyons, J.A, Januliene, D, Ulstrup, J.J, Dieudonne, T, Montigny, C, Ash, M.R, Karlsen, J.L, Boesen, T, Kuhlbrandt, W, Lenoir, G, Moeller, A, Nissen, P.
Deposit date:2019-05-13
Release date:2019-07-03
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure and autoregulation of a P4-ATPase lipid flippase.
Nature, 571, 2019
6RRK
DownloadVisualize
BU of 6rrk by Molmil
Crystal structure of the central region of human cohesin subunit STAG1 in complex with RAD21 peptide
Descriptor: Cohesin subunit SA-1, Double-strand-break repair protein rad21 homolog
Authors:Newman, J.A, katis, V.L, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
Deposit date:2019-05-20
Release date:2019-06-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:STAG1 vulnerabilities for exploiting cohesin synthetic lethality in STAG2-deficient cancers.
Life Sci Alliance, 3, 2020
5IC6
DownloadVisualize
BU of 5ic6 by Molmil
Crystal structure of caspase-7 DEVE peptide complex
Descriptor: Caspase-7 subunit p11, Caspase-7 subunit p20, DEVE peptide
Authors:Seaman, J.E, Julien, O, Lee, P.S, Rettenmaier, T.J, Thomsen, N.D, Wells, J.A.
Deposit date:2016-02-22
Release date:2016-07-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cacidases: caspases can cleave after aspartate, glutamate and phosphoserine residues.
Cell Death Differ., 23, 2016
2OIH
DownloadVisualize
BU of 2oih by Molmil
Hepatitis Delta Virus gemonic ribozyme precursor with C75U mutation and bound to monovalent cation Tl+
Descriptor: HDV ribozyme, THALLIUM (I) ION, U1 small nuclear ribonucleoprotein A
Authors:Ke, A, Ding, F, Batchelor, J.D, Doudna, J.A.
Deposit date:2007-01-11
Release date:2007-03-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural roles of monovalent cations in the HDV ribozyme.
Structure, 15, 2007
2OJ3
DownloadVisualize
BU of 2oj3 by Molmil
Hepatitis Delta Virus ribozyme precursor structure, with C75U mutation, bound to Tl+ and cobalt hexammine (Co(NH3)63+)
Descriptor: COBALT HEXAMMINE(III), HDV RIBOZYME, THALLIUM (I) ION, ...
Authors:Ke, A, Ding, F, Batchelor, J.D, Doudna, J.A.
Deposit date:2007-01-12
Release date:2007-03-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural roles of monovalent cations in the HDV ribozyme.
Structure, 15, 2007
5I74
DownloadVisualize
BU of 5i74 by Molmil
X-ray structure of the ts3 human serotonin transporter complexed with Br-citalopram at the central site
Descriptor: (1S)-1-(4-bromophenyl)-1-[3-(dimethylamino)propyl]-1,3-dihydro-2-benzofuran-5-carbonitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody, ...
Authors:Coleman, J.A, Green, E.M, Gouaux, E.
Deposit date:2016-02-16
Release date:2016-04-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.395 Å)
Cite:X-ray structures and mechanism of the human serotonin transporter.
Nature, 532, 2016
6S38
DownloadVisualize
BU of 6s38 by Molmil
Ligand binding domain of the P. putida receptor PcaY_PP in complex with quinate
Descriptor: (1S,3R,4S,5R)-1,3,4,5-tetrahydroxycyclohexanecarboxylic acid, Aromatic acid chemoreceptor
Authors:Gavira, J.A, Mantilla, M.A, Fernandez, M, Krell, T.
Deposit date:2019-06-24
Release date:2020-10-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The structural basis for signal promiscuity in a bacterial chemoreceptor.
Febs J., 288, 2021
6QZL
DownloadVisualize
BU of 6qzl by Molmil
Structure of the H1 domain of human KCTD12
Descriptor: BTB/POZ domain-containing protein KCTD12
Authors:Pinkas, D.M, Bufton, J.C, Fox, A.E, Newman, J.A, Kupinska, K, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.N, Structural Genomics Consortium (SGC)
Deposit date:2019-03-11
Release date:2019-03-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure of the H1 domain of human KCTD12
To be published
5I71
DownloadVisualize
BU of 5i71 by Molmil
X-ray structure of the ts3 human serotonin transporter complexed with s-citalopram at the central site
Descriptor: (1S)-1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody, ...
Authors:Coleman, J.A, Green, E.M, Gouaux, E.
Deposit date:2016-02-16
Release date:2016-04-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:X-ray structures and mechanism of the human serotonin transporter.
Nature, 532, 2016
2O1G
DownloadVisualize
BU of 2o1g by Molmil
Natural occurring mutant of Human ABO(H) Galactosyltransferase: GTB/M214T
Descriptor: ABO glycosyltransferase, MERCURY (II) ION
Authors:Letts, J.A, Borisova, S.N, Evans, S.V.
Deposit date:2006-11-28
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural effects of naturally occurring human blood group B galactosyltransferase mutations adjacent to the DXD motif.
J.Biol.Chem., 282, 2007
6QNV
DownloadVisualize
BU of 6qnv by Molmil
Fibrinogen-like globe domain of Human Tenascin-C
Descriptor: Tenascin
Authors:Coker, J.A, Bezerra, G.A, Bradshaw, W.J, Zhang, M, Yosaatmadja, Y, Fernandez-Cid, A, Shrestha, L, Burgess-Brown, N, Gileadi, O, Arrowsmith, C.H, Bountra, C, Midwood, K.S, Yue, W.W, Marsden, B.D, Structural Genomics Consortium (SGC)
Deposit date:2019-02-12
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Fibrinogen-like globe domain of Human Tenascin-C
To Be Published
3HUD
DownloadVisualize
BU of 3hud by Molmil
THE STRUCTURE OF HUMAN BETA 1 BETA 1 ALCOHOL DEHYDROGENASE: CATALYTIC EFFECTS OF NON-ACTIVE-SITE SUBSTITUTIONS
Descriptor: ALCOHOL DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Hurley, T.D, Bosron, W.F, Hamilton, J.A, Amzel, L.M.
Deposit date:1993-01-04
Release date:1994-01-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of human beta 1 beta 1 alcohol dehydrogenase: catalytic effects of non-active-site substitutions.
Proc.Natl.Acad.Sci.USA, 88, 1991
2OEM
DownloadVisualize
BU of 2oem by Molmil
Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ and 2,3-diketohexane 1-phosphate
Descriptor: (1Z)-2-HYDROXY-3-OXOHEX-1-EN-1-YL DIHYDROGEN PHOSPHATE, 2,3-diketo-5-methylthiopentyl-1-phosphate enolase, MAGNESIUM ION
Authors:Fedorov, A.A, Imker, H.J, Fedorov, E.V, Gerlt, J.A, Almo, S.C.
Deposit date:2006-12-30
Release date:2007-03-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanistic Diversity in the RuBisCO Superfamily: The "Enolase" in the Methionine Salvage Pathway in Geobacillus kaustophilus.
Biochemistry, 46, 2007
6QC6
DownloadVisualize
BU of 6qc6 by Molmil
Ovine respiratory complex I FRC open class 1
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Acyl carrier protein, ...
Authors:Letts, J.A, Sazanov, L.A.
Deposit date:2018-12-27
Release date:2019-08-21
Last modified:2019-10-02
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structures of Respiratory Supercomplex I+III2Reveal Functional and Conformational Crosstalk.
Mol.Cell, 75, 2019
5IC4
DownloadVisualize
BU of 5ic4 by Molmil
Crystal structure of caspase-3 DEVE peptide complex
Descriptor: Caspase-3 subunit p12, Caspase-3 subunit p17, DEVE peptide
Authors:Seaman, J.E, Julien, O, Lee, P.S, Rettenmaier, T.J, Thomsen, N.D, Wells, J.A.
Deposit date:2016-02-22
Release date:2016-07-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Cacidases: caspases can cleave after aspartate, glutamate and phosphoserine residues.
Cell Death Differ., 23, 2016
2OAP
DownloadVisualize
BU of 2oap by Molmil
Crystal structure of the archaeal secretion ATPase GspE in complex with AMP-PNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Type II secretion system protein
Authors:Yamagata, A, Tainer, J.A.
Deposit date:2006-12-17
Release date:2007-02-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Hexameric structures of the archaeal secretion ATPase GspE and implications for a universal secretion mechanism.
Embo J., 26, 2007
2OEJ
DownloadVisualize
BU of 2oej by Molmil
Crystal structure of a rubisco-like protein from Geobacillus kaustophilus (tetramutant form), liganded with phosphate ions
Descriptor: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase, PHOSPHATE ION
Authors:Fedorov, A.A, Imker, H.J, Fedorov, E.V, Almo, S.C, Gerlt, J.A.
Deposit date:2006-12-30
Release date:2007-03-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Mechanistic Diversity in the RuBisCO Superfamily: The "Enolase" in the Methionine Salvage Pathway in Geobacillus kaustophilus.
Biochemistry, 46, 2007
3J40
DownloadVisualize
BU of 3j40 by Molmil
Validated Near-Atomic Resolution Structure of Bacteriophage Epsilon15 Derived from Cryo-EM and Modeling
Descriptor: gp10, gp7
Authors:Baker, M.L, Hryc, C.F, Zhang, Q, Wu, W, Jakana, J, Haase-Pettingell, C, Afonine, P.V, Adams, P.D, King, J.A, Jiang, W, Chiu, W.
Deposit date:2013-05-30
Release date:2013-07-10
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Validated near-atomic resolution structure of bacteriophage epsilon15 derived from cryo-EM and modeling.
Proc.Natl.Acad.Sci.USA, 110, 2013
3I0N
DownloadVisualize
BU of 3i0n by Molmil
Structure of the S. pombe Nbs1 FHA/BRCT-repeat domain
Descriptor: DNA repair and telomere maintenance protein nbs1, GLYCEROL
Authors:Clapperton, J.A, Lloyd, J, Chapman, J.R, Jackson, S.P, Smerdon, S.J.
Deposit date:2009-06-25
Release date:2009-10-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A supramodular FHA/BRCT-repeat architecture mediates Nbs1 adaptor function in response to DNA damage
Cell(Cambridge,Mass.), 139, 2009
5HUR
DownloadVisualize
BU of 5hur by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25T/I92K at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Skerritt, L.A, Caro, J.A, Heroux, A, Schlessman, J.L, Garcia-Moreno E, B.
Deposit date:2016-01-27
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+PHS L25T/I92K at cryogenic temperature
To be Published
6RRC
DownloadVisualize
BU of 6rrc by Molmil
Crystal structure of the N-terminal region of human cohesin subunit STAG1 in complex with RAD21 peptide
Descriptor: Cohesin subunit SA-1, Double-strand-break repair protein rad21 homolog, SULFATE ION
Authors:Newman, J.A, Katis, V.L, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
Deposit date:2019-05-17
Release date:2019-06-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:STAG1 vulnerabilities for exploiting cohesin synthetic lethality in STAG2-deficient cancers.
Life Sci Alliance, 3, 2020
3I6E
DownloadVisualize
BU of 3i6e by Molmil
CRYSTAL STRUCTURE OF MUCONATE LACTONIZING ENZYME FROM Ruegeria pomeroyi.
Descriptor: MAGNESIUM ION, Muconate cycloisomerase I, SODIUM ION
Authors:Fedorov, A.A, Fedorov, E.V, Sauder, J.M, Burley, S.K, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-07
Release date:2009-07-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of muconate lactonizing enzyme from Ruegeria pomeroyi.
To be Published
2OIF
DownloadVisualize
BU of 2oif by Molmil
The crystal structure of ferric cyanide bound barley hexacoordinate hemoglobin.
Descriptor: CYANIDE ION, Non-legume hemoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Hoy, J.A.
Deposit date:2007-01-10
Release date:2007-07-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Plant hemoglobins: a molecular fossil record for the evolution of oxygen transport
J.Mol.Biol., 371, 2007
6QCF
DownloadVisualize
BU of 6qcf by Molmil
Ovine respiratory complex I FRC open class 6
Descriptor: Acyl carrier protein, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Letts, J.A, Sazanov, L.A.
Deposit date:2018-12-27
Release date:2019-08-21
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Structures of Respiratory Supercomplex I+III2Reveal Functional and Conformational Crosstalk.
Mol.Cell, 75, 2019
5HRY
DownloadVisualize
BU of 5hry by Molmil
Computationally Designed Cyclic Dimer ank3C2_1
Descriptor: ank3C2_1
Authors:Cascio, D, McNamara, D.E, Fallas, J.A, Baker, D, Yeates, T.O.
Deposit date:2016-01-24
Release date:2017-04-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Computational design of self-assembling cyclic protein homo-oligomers.
Nat Chem, 9, 2017

225158

數據於2024-09-18公開中

PDB statisticsPDBj update infoContact PDBjnumon