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Allosteric peptides that bind to a caspase zymogen and mediate caspase tetramerization
Descriptor:	Caspase-6, PHOSPHATE ION, phage-derived peptide 419
Authors:	Murray, J.M.
Deposit date:	2012-04-06
Release date:	2012-06-20
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (2.6465 Å)
Cite:	Allosteric peptides bind a caspase zymogen and mediate caspase tetramerization. Nat.Chem.Biol., 8, 2012

8IV4

Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and 3E2 (local refinement)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, heavy chain of 3E2, ...
Authors:	Sun, H, Jiang, Y, Zheng, Q, Li, S, Xia, N.
Deposit date:	2023-03-26
Release date:	2023-08-16
Last modified:	2024-02-14
Method:	ELECTRON MICROSCOPY (3.59 Å)
Cite:	Two antibodies show broad, synergistic neutralization against SARS-CoV-2 variants by inducing conformational change within the RBD. Protein Cell, 15, 2024

8IV8

Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 3E2 and 1C4 (local refinement)
Descriptor:	Spike protein S1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, heavy chain of 1C4, ...
Authors:	Sun, H, Jiang, Y, Zheng, Q, Li, S, Xia, N.
Deposit date:	2023-03-26
Release date:	2023-08-16
Last modified:	2024-02-14
Method:	ELECTRON MICROSCOPY (3.92 Å)
Cite:	Two antibodies show broad, synergistic neutralization against SARS-CoV-2 variants by inducing conformational change within the RBD. Protein Cell, 15, 2024

8IVA

Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs XMA01 and 3E2 (local refinement)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, heavy chain of 3E2, ...
Authors:	Sun, H, Jiang, Y, Zheng, Q, Li, S, Xia, N.
Deposit date:	2023-03-26
Release date:	2023-08-16
Last modified:	2024-02-14
Method:	ELECTRON MICROSCOPY (3.95 Å)
Cite:	Two antibodies show broad, synergistic neutralization against SARS-CoV-2 variants by inducing conformational change within the RBD. Protein Cell, 15, 2024

8IV5

Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and 1C4 (local refinement)
Descriptor:	Spike protein S1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, heavy chain of 1C4, ...
Authors:	Sun, H, Jiang, Y, Zheng, Q, Li, S, Xia, N.
Deposit date:	2023-03-26
Release date:	2023-08-16
Last modified:	2024-02-14
Method:	ELECTRON MICROSCOPY (3.77 Å)
Cite:	Two antibodies show broad, synergistic neutralization against SARS-CoV-2 variants by inducing conformational change within the RBD. Protein Cell, 15, 2024

4NIE

Crystal structure of the orphan nuclear receptor ROR(gamma)t ligand-binding domain in complex with small molecule ligand
Descriptor:	3-[BENZYL(DIMETHYL)AMMONIO]PROPANE-1-SULFONATE, N-(4-{[benzyl(propyl)amino]methyl}phenyl)-2-[4-(ethylsulfonyl)phenyl]acetamide, Nuclear receptor ROR-gamma, ...
Authors:	Ma, Y.L, Yang, L.Q.
Deposit date:	2013-11-06
Release date:	2013-12-11
Last modified:	2024-03-20
Method:	X-RAY DIFFRACTION (2.01 Å)
Cite:	Discovery of Tertiary Amine and Indole Derivatives as Potent ROR gamma t Inverse Agonists. Acs Med.Chem.Lett., 5, 2014

4O1V

SPOP Promotes Tumorigenesis by Acting as a Key Regulatory Hub in Kidney Cancer
Descriptor:	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, Speckle-type POZ protein
Authors:	Calabrese, M.F, Watson, E.R, Schulman, B.A.
Deposit date:	2013-12-16
Release date:	2014-04-30
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	SPOP Promotes Tumorigenesis by Acting as a Key Regulatory Hub in Kidney Cancer. Cancer Cell, 25, 2014

8TDY

16mer self-complementary duplex RNA with D:U pair sequence 1
Descriptor:	MAGNESIUM ION, RNA
Authors:	Fang, Z, Jia, X, Szostak, J.W.
Deposit date:	2023-07-05
Release date:	2024-06-12
Method:	X-RAY DIFFRACTION (1.66 Å)
Cite:	Diaminopurine in Nonenzymatic RNA Template Copying. J.Am.Chem.Soc., 2024

8TDZ

16mer self-complementary duplex RNA with D:U pair sequence 2
Descriptor:	COBALT HEXAMMINE(III), RNA
Authors:	Fang, Z, Jia, X, Szostak, J.W.
Deposit date:	2023-07-05
Release date:	2024-06-12
Method:	X-RAY DIFFRACTION (1.64 Å)
Cite:	Diaminopurine in Nonenzymatic RNA Template Copying. J.Am.Chem.Soc., 2024

8TE0

16mer self-complementary duplex RNA with D:C pair sequence 1
Descriptor:	MAGNESIUM ION, RNA
Authors:	Fang, Z, Jia, X, Szostak, J.W.
Deposit date:	2023-07-05
Release date:	2024-06-12
Method:	X-RAY DIFFRACTION (1.42 Å)
Cite:	Diaminopurine in Nonenzymatic RNA Template Copying. J.Am.Chem.Soc., 2024

8TE2

16mer self-complementary duplex RNA with D:C pair sequence 2
Descriptor:	CALCIUM ION, RNA
Authors:	Fang, Z, Jia, X, Szostak, J.W.
Deposit date:	2023-07-05
Release date:	2024-06-12
Method:	X-RAY DIFFRACTION (1.63 Å)
Cite:	Diaminopurine in Nonenzymatic RNA Template Copying. J.Am.Chem.Soc., 2024

1AGO

THE SOLUTION NMR STRUCTURE OF AN (S)-A-(N6-ADENYL)-STYRENE OXIDE-RAS61 OLIGODEOXYNUCLEOTIDE MODIFIED AT THE THIRD POSITION OF THE CODON 61 REGION, MINIMIZED AVERAGE STRUCTURE
Descriptor:	DNA (5'-D(CPGPGPAPCPAPYPGPAPAPG)-3'), DNA (5'-D(CPTPTPCPTPTPGPTPCPCPG)-3')
Authors:	Feng, B, Stone, M.P.
Deposit date:	1997-03-25
Release date:	1997-08-20
Last modified:	2024-05-22
Method:	SOLUTION NMR
Cite:	Major groove (S)-alpha-(N6-adenyl)styrene oxide adducts in an oligodeoxynucleotide containing the human N-ras codon 61 sequence: conformations of the S(61,2) and S(61,3) sequence isomers from 1H NMR. Biochemistry, 35, 1996

7CH7

Cryo-EM structure of E.coli MlaFEB
Descriptor:	Lipid asymmetry maintenance ABC transporter permease subunit MlaE, Lipid asymmetry maintenance protein MlaB, Phospholipid ABC transporter ATP-binding protein MlaF
Authors:	Zhou, C, Shi, H, Huang, Y.
Deposit date:	2020-07-05
Release date:	2021-05-19
Last modified:	2024-03-27
Method:	ELECTRON MICROSCOPY (3.9 Å)
Cite:	Structural Insight into Phospholipid Transport by the MlaFEBD Complex from P. aeruginosa. J.Mol.Biol., 433, 2021

7CHA

Cryo-EM structure of P.aeruginosa MlaFEBD with AMPPNP
Descriptor:	2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, MlaD domain-containing protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:	Zhou, C, Shi, H, Zhang, M, Huang, Y.
Deposit date:	2020-07-05
Release date:	2021-05-19
Last modified:	2024-03-27
Method:	ELECTRON MICROSCOPY (3.9 Å)
Cite:	Structural Insight into Phospholipid Transport by the MlaFEBD Complex from P. aeruginosa. J.Mol.Biol., 433, 2021

7CH6

Cryo-EM structure of E.coli MlaFEB with AMPPNP
Descriptor:	Lipid asymmetry maintenance ABC transporter permease subunit MlaE, Lipid asymmetry maintenance protein MlaB, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:	Zhou, C, Shi, H, Zhang, M, Huang, Y.
Deposit date:	2020-07-05
Release date:	2021-08-04
Last modified:	2024-03-27
Method:	ELECTRON MICROSCOPY (3.4 Å)
Cite:	Structural Insight into Phospholipid Transport by the MlaFEBD Complex from P. aeruginosa. J.Mol.Biol., 433, 2021

7CH8

Cryo-EM structure of P.aeruginosa MlaFEBD with ADP-V
Descriptor:	2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, ADP METAVANADATE, MAGNESIUM ION, ...
Authors:	Zhou, C, Shi, H, Zhang, M, Huang, Y.
Deposit date:	2020-07-05
Release date:	2021-10-06
Last modified:	2024-05-29
Method:	ELECTRON MICROSCOPY (3.9 Å)
Cite:	Structural Insight into Phospholipid Transport by the MlaFEBD Complex from P. aeruginosa. J.Mol.Biol., 433, 2021

7CH9

Cryo-EM structure of P.aeruginosa MlaFEBD
Descriptor:	2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, MlaD domain-containing protein, Probable ATP-binding component of ABC transporter, ...
Authors:	Zhou, C, Shi, H, Zhang, M, Huang, Y.
Deposit date:	2020-07-05
Release date:	2021-10-06
Last modified:	2024-05-29
Method:	ELECTRON MICROSCOPY (3.5 Å)
Cite:	Structural Insight into Phospholipid Transport by the MlaFEBD Complex from P. aeruginosa. J.Mol.Biol., 433, 2021

1AGK

THE SOLUTION NMR STRUCTURE OF AN (R)-A-(N6-ADENYL)-STYRENE OXIDE-RAS61 OLIGODEOXYNUCLEOTIDE MODIFIED AT THE SECOND POSITION OF THE CODON 61 REGION, MINIMIZED AVERAGE STRUCTURE
Descriptor:	DNA (5'-D(CPGPGPAPCPRPAPGPAPAPG)-3'), DNA (5'-D(CPTPTPCPTPTPGPTPCPCPG)-3')
Authors:	Feng, B, Stone, M.P.
Deposit date:	1997-03-25
Release date:	1997-08-20
Last modified:	2024-05-22
Method:	SOLUTION NMR
Cite:	Major groove (R)-alpha-(N6-adenyl)styrene oxide adducts in an oligodeoxynucleotide containing the human N-ras codon 61 sequence: conformations of the R(61,2) and R(61,3) sequence isomers from 1H NMR. Biochemistry, 34, 1995

1AGZ

THE SOLUTION NMR STRUCTURE OF AN (R)-A-(N6-ADENYL)-STYRENE OXIDE-RAS61 OLIGODEOXYNUCLEOTIDE MODIFIED AT THE THIRD POSITION OF THE CODON 61 REGION, MINIMIZED AVERAGE STRUCTURE
Descriptor:	DNA (5'-D(CPGPGPAPCPAPRPGPAPAPG)-3'), DNA (5'-D(CPTPTPCPTPTPGPTPCPCPG)-3')
Authors:	Feng, B, Stone, M.P.
Deposit date:	1997-03-26
Release date:	1997-08-20
Last modified:	2024-05-22
Method:	SOLUTION NMR
Cite:	Major groove (R)-alpha-(N6-adenyl)styrene oxide adducts in an oligodeoxynucleotide containing the human N-ras codon 61 sequence: conformations of the R(61,2) and R(61,3) sequence isomers from 1H NMR. Biochemistry, 34, 1995

4YN7

Non-oxidized YfiR
Descriptor:	SULFATE ION, YfiR
Authors:	Yang, X, Jiang, T.
Deposit date:	2015-03-09
Release date:	2015-04-22
Last modified:	2015-05-20
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Crystal structures of YfiR from Pseudomonas aeruginosa in two redox states Biochem.Biophys.Res.Commun., 461, 2015

4YNA

Oxidized YfiR
Descriptor:	SULFATE ION, YfiR
Authors:	Xu, M, Jiang, T.
Deposit date:	2015-03-09
Release date:	2015-04-22
Last modified:	2023-11-08
Method:	X-RAY DIFFRACTION (3.2 Å)
Cite:	Crystal structures of YfiR from Pseudomonas aeruginosa in two redox states Biochem.Biophys.Res.Commun., 461, 2015

7X2I

Cryo-EM structure of Coxsackievirus B1 pre-A particle in complex with nAb 2E6 (CVB1-pre-A:2E6)
Descriptor:	2E6 heavy chain, 2E6 light chain, Capsid protein VP4, ...
Authors:	Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:	2022-02-25
Release date:	2022-09-28
Last modified:	2022-10-05
Method:	ELECTRON MICROSCOPY (3.29 Å)
Cite:	Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail. Cell Host Microbe, 30, 2022

7X37

Cryo-EM structure of Coxsackievirus B1 A particle in complex with nAb 2E6 (CVB1-A:2E6)
Descriptor:	2E6 heavy chain, 2E6 light chain, VP2, ...
Authors:	Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:	2022-02-28
Release date:	2022-09-28
Last modified:	2022-10-05
Method:	ELECTRON MICROSCOPY (3.31 Å)
Cite:	Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail. Cell Host Microbe, 30, 2022

7X3D

Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 9A3 (CVB1-M:9A3)
Descriptor:	9A3 heavy chain, 9A3 light chain, Capsid protein VP4, ...
Authors:	Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:	2022-02-28
Release date:	2022-09-28
Method:	ELECTRON MICROSCOPY (3.48 Å)
Cite:	Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail. Cell Host Microbe, 30, 2022

7X4K

Cryo-EM structure of Coxsackievirus B1 empty particle in complex with nAb 9A3 (classified from CVB1 mature virion in complex with 8A10 and 9A3)
Descriptor:	9A3 heavy chain, 9A3 light chain, Genome polyprotein, ...
Authors:	Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:	2022-03-02
Release date:	2022-09-28
Method:	ELECTRON MICROSCOPY (3.82 Å)
Cite:	Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail. Cell Host Microbe, 30, 2022

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Displayed results:	25
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