Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3EUD
DownloadVisualize
BU of 3eud by Molmil
Structure of the CS domain of the essential H/ACA RNP assembly protein Shq1p
Descriptor: Protein SHQ1
Authors:Singh, M, Cascio, D, Gonzales, F.A, Heckmann, N, Chanfreau, G, Feigon, J.
Deposit date:2008-10-09
Release date:2008-11-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and Functional Studies of the CS Domain of the Essential H/ACA Ribonucleoparticle Assembly Protein SHQ1.
J.Biol.Chem., 284, 2009
3UID
DownloadVisualize
BU of 3uid by Molmil
Crystal Structure of Protein Ms6760 from Mycobacterium smegmatis
Descriptor: Putative uncharacterized protein
Authors:Bajaj, R.A, Miallau, L, Cascio, D, Arbing, M, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2011-11-04
Release date:2011-11-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.571 Å)
Cite:Crystal structure of the toxin Msmeg_6760, the structural homolog of Mycobacterium tuberculosis Rv2035, a novel type II toxin involved in the hypoxic response.
Acta Crystallogr F Struct Biol Commun, 72, 2016
3G3X
DownloadVisualize
BU of 3g3x by Molmil
Crystal structure of spin labeled T4 Lysozyme (T151R1) at 100 K
Descriptor: 2-HYDROXYETHYL DISULFIDE, AZIDE ION, CHLORIDE ION, ...
Authors:Fleissner, M.R, Cascio, D, Hubbell, W.L.
Deposit date:2009-02-02
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural origin of weakly ordered nitroxide motion in spin-labeled proteins.
Protein Sci., 18, 2009
4IHY
DownloadVisualize
BU of 4ihy by Molmil
Crystal structure of Fis bound to 27bp Inosine substituted DNA F29-dI (AAATTTGTTTGIICICTGAGCAAATTT)
Descriptor: 27-bp DNA Strand A, 27-bp DNA Strand B, DNA-binding protein fis
Authors:Hancock, S.P, Cascio, D, Johnson, R.C.
Deposit date:2012-12-19
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Control of DNA minor groove width and Fis protein binding by the purine 2-amino group.
Nucleic Acids Res., 41, 2013
4IHX
DownloadVisualize
BU of 4ihx by Molmil
Crystal structure of Fis bound to 27 bp 2-Aminopurine substituted DNA F28-2AP (AAATTTGTTTGA2T2TTGAGCAAATTT)
Descriptor: 27-bp DNA Strand A, 27-bp DNA Strand B, DNA-binding protein fis
Authors:Hancock, S.P, Cascio, D, Johnson, R.C.
Deposit date:2012-12-19
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Control of DNA minor groove width and Fis protein binding by the purine 2-amino group.
Nucleic Acids Res., 41, 2013
4IHV
DownloadVisualize
BU of 4ihv by Molmil
Crystal structure of Fis bound to 27 bp sequence DNA F28 (AAATTTGTTTGAGCGTTGAGCAAATTT)
Descriptor: 27-bp DNA Strand A, 27-bp DNA Strand B, DNA-binding protein fis
Authors:Hancock, S.P, Cascio, D, Johnson, R.C.
Deposit date:2012-12-19
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.716 Å)
Cite:Control of DNA minor groove width and Fis protein binding by the purine 2-amino group.
Nucleic Acids Res., 41, 2013
3LE4
DownloadVisualize
BU of 3le4 by Molmil
Crystal structure of the DGCR8 dimerization domain
Descriptor: Microprocessor complex subunit DGCR8
Authors:Senturia, R, Cascio, D, Sawaya, M, Guo, F.
Deposit date:2010-01-14
Release date:2010-07-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Structure of the dimerization domain of DiGeorge Critical Region 8
Protein Sci., 19, 2010
6E75
DownloadVisualize
BU of 6e75 by Molmil
Structure of Human Transthyretin Asp38Ala Mutant
Descriptor: ACETATE ION, Transthyretin
Authors:Chung, K, Saelices, L, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2018-07-25
Release date:2019-07-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Variants of Transthyretin
To Be Published
4I7A
DownloadVisualize
BU of 4i7a by Molmil
GrpN pentameric microcompartment shell protein from Rhodospirillum rubrum
Descriptor: CHLORIDE ION, Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Authors:Wheatley, N.M, Gidaniyan, S.D, Cascio, D, Yeates, T.O.
Deposit date:2012-11-30
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Bacterial microcompartment shells of diverse functional types possess pentameric vertex proteins.
Protein Sci., 22, 2013
4IHW
DownloadVisualize
BU of 4ihw by Molmil
Crystal structure of Fis bound to 27 bp Inosine substituted DNA F28-dI (AAATTTGTTTGAICITTGAGCAAATTT)
Descriptor: 27-bp DNA Strand A, 27-bp DNA Strand B, DNA-binding protein fis
Authors:Hancock, S.P, Cascio, D, Johnson, R.C.
Deposit date:2012-12-19
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Control of DNA minor groove width and Fis protein binding by the purine 2-amino group.
Nucleic Acids Res., 41, 2013
1SQ3
DownloadVisualize
BU of 1sq3 by Molmil
Crystal structures of a novel open pore ferritin from the hyperthermophilic Archaeon Archaeoglobus fulgidus.
Descriptor: FE (III) ION, ferritin
Authors:Johnson, E, Cascio, D, Michael, S, Schroder, I.
Deposit date:2004-03-17
Release date:2005-04-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of a tetrahedral open pore ferritin from the hyperthermophilic archaeon Archaeoglobus fulgidus.
Structure, 13, 2005
5FOZ
DownloadVisualize
BU of 5foz by Molmil
De novo structure of the binary mosquito larvicide BinAB at pH 10
Descriptor: LARVICIDAL TOXIN PROTEIN, SODIUM ION, TOXIN
Authors:Colletier, J.P, Sawaya, M.R, Gingery, M, Rodriguez, J.A, Cascio, D, Brewster, A.S, Michels-Clark, T, Boutet, S, Williams, G.J, Messerschmidt, M, DePonte, D.P, Sierra, R.G, Laksmono, H, Koglin, J.E, Hunter, M.S, W Park, H, Uervirojnangkoorn, M, Bideshi, D.L, Brunger, A.T, Federici, B.A, Sauter, N.K, Eisenberg, D.S.
Deposit date:2015-11-26
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:De Novo Phasing with X-Ray Laser Reveals Mosquito Larvicide Binab Structure.
Nature, 539, 2016
3SEY
DownloadVisualize
BU of 3sey by Molmil
Zn-mediated Polymer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form II)
Descriptor: ACETATE ION, GLYCEROL, Maltose-binding periplasmic protein, ...
Authors:Zhao, M, Soriaga, A.B, Laganowsky, A, Sawaya, M.R, Cascio, D, Yeates, T.O.
Deposit date:2011-06-11
Release date:2011-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
3SEU
DownloadVisualize
BU of 3seu by Molmil
Zn-mediated Polymer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form III)
Descriptor: ACETATE ION, GLYCEROL, Maltose-binding periplasmic protein, ...
Authors:Zhao, M, Soriaga, A.B, Laganowsky, A, Sawaya, M.R, Cascio, D, Yeates, T.O.
Deposit date:2011-06-11
Release date:2011-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
3SEX
DownloadVisualize
BU of 3sex by Molmil
Ni-mediated Dimer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form II)
Descriptor: IODIDE ION, Maltose-binding periplasmic protein, NICKEL (II) ION, ...
Authors:Zhao, M, Soriaga, A.B, Laganowsky, A, Sawaya, M.R, Cascio, D, Yeates, T.O.
Deposit date:2011-06-11
Release date:2011-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
3H6P
DownloadVisualize
BU of 3h6p by Molmil
Crystal structure of Rv3019c-Rv3020c from Mycobacterium tuberculosis
Descriptor: ESAT-6 LIKE PROTEIN ESXS, ESAT-6-like protein esxR, GLYCEROL
Authors:Chan, S, Arbing, M, Phan, T, Kaufmann, M, Cascio, D, Eisenberg, D, TB Structural Genomics Consortium (TBSGC), Integrated Center for Structure and Function Innovation (ISFI)
Deposit date:2009-04-23
Release date:2009-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of Rv3019c-Rv3020c from Mycobacterium tuberculosis
To be Published
5G37
DownloadVisualize
BU of 5g37 by Molmil
MR structure of the binary mosquito larvicide BinAB at pH 5
Descriptor: 41.9 KDA INSECTICIDAL TOXIN, LARVICIDAL TOXIN 51 KDA PROTEIN
Authors:Colletier, J.P, Sawaya, M.R, Gingery, M, Rodriguez, J.A, Cascio, D, Brewster, A.S, Michels-Clark, T, Boutet, S, Williams, G.J, Messerschmidt, M, DePonte, D.P, Sierra, R.G, Laksmono, H, Koglin, J.E, Hunter, M.S, W Park, H, Uervirojnangkoorn, M, Bideshi, D.L, Brunger, A.T, Federici, B.A, Sauter, N.K, Eisenberg, D.S.
Deposit date:2016-04-24
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:De Novo Phasing with X-Ray Laser Reveals Mosquito Larvicide Binab Structure.
Nature, 539, 2016
5HA7
DownloadVisualize
BU of 5ha7 by Molmil
Human Aldose Reductase in Complex with NADP+ and WY14643 in Space Group P212121
Descriptor: 2-({4-CHLORO-6-[(2,3-DIMETHYLPHENYL)AMINO]PYRIMIDIN-2-YL}SULFANYL)ACETIC ACID, Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Sawaya, M.R, Cascio, D, Balendiran, G.K.
Deposit date:2015-12-30
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Characterization of WY 14,643 and its Complex with Aldose Reductase.
Sci Rep, 6, 2016
3VDX
DownloadVisualize
BU of 3vdx by Molmil
Structure of a 16 nm protein cage designed by fusing symmetric oligomeric domains
Descriptor: Designed 16nm tetrahedral protein cage containing Non-haem bromoperoxidase BPO-A2 and Matrix protein 1
Authors:Lai, Y.-T, Cascio, D, Yeates, T.O.
Deposit date:2012-01-06
Release date:2012-06-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Structure of a 16-nm cage designed by using protein oligomers.
Science, 336, 2012
5HQL
DownloadVisualize
BU of 5hql by Molmil
Structure function studies of R. palustris RubisCO (A47V-M331A mutant; CABP-bound; no expression tag)
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
Authors:Arbing, M.A, Shin, A, Cascio, D, Satagopan, S, North, J.A, Tabita, F.R.
Deposit date:2016-01-21
Release date:2017-01-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structure function studies of R. palustris RubisCO
To Be Published
1S3Q
DownloadVisualize
BU of 1s3q by Molmil
Crystal structures of a novel open pore ferritin from the hyperthermophilic Archaeon Archaeoglobus fulgidus
Descriptor: ZINC ION, ferritin
Authors:Johnson, E, Cascio, D, Sawaya, M, Schroeder, I.
Deposit date:2004-01-13
Release date:2005-04-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of a tetrahedral open pore ferritin from the hyperthermophilic archaeon Archaeoglobus fulgidus.
Structure, 13, 2005
5FOY
DownloadVisualize
BU of 5foy by Molmil
De novo structure of the binary mosquito larvicide BinAB at pH 7
Descriptor: 41.9 KDA INSECTICIDAL TOXIN, LARVICIDAL TOXIN 51 KDA PROTEIN
Authors:Colletier, J.P, Sawaya, M.R, Gingery, M, Rodriguez, J.A, Cascio, D, Brewster, A.S, Michels-Clark, T, Boutet, S, Williams, G.J, Messerschmidt, M, DePonte, D.P, Sierra, R.G, Laksmono, H, Koglin, J.E, Hunter, M.S, W Park, H, Uervirojnangkoorn, M, Bideshi, D.L, Brunger, A.T, Federici, B.A, Sauter, N.K, Eisenberg, D.S.
Deposit date:2015-11-26
Release date:2016-10-05
Last modified:2019-08-28
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:De Novo Phasing with X-Ray Laser Reveals Mosquito Larvicide Binab Structure.
Nature, 539, 2016
3K2R
DownloadVisualize
BU of 3k2r by Molmil
Crystal Structure of Spin Labeled T4 Lysozyme Mutant K65V1/R76V1
Descriptor: CHLORIDE ION, HEXANE-1,6-DIOL, Lysozyme, ...
Authors:Toledo Warshaviak, D, Cascio, D, Khramtsov, V.V, Hubbell, W.L.
Deposit date:2009-09-30
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Spin Labeled T4 Lysozyme Mutant K65V1/R76V1
To be Published
1RH6
DownloadVisualize
BU of 1rh6 by Molmil
Bacteriophage Lambda Excisionase (Xis)-DNA Complex
Descriptor: 5'-D(*CP*TP*AP*TP*GP*TP*AP*GP*TP*CP*TP*GP*TP*TP*G)-3', 5'-D(P*CP*AP*AP*CP*AP*GP*AP*CP*TP*AP*CP*AP*TP*AP*G)-3', Excisionase
Authors:Sam, M.D, Cascio, D, Johnson, R.C, Clubb, R.T.
Deposit date:2003-11-13
Release date:2004-06-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the excisionase-DNA complex from bacteriophage lambda.
J.Mol.Biol., 338, 2004
3H87
DownloadVisualize
BU of 3h87 by Molmil
Rv0301 Rv0300 Toxin Antitoxin Complex from Mycobacterium tuberculosis
Descriptor: BETA-MERCAPTOETHANOL, GLYCEROL, IMIDAZOLE, ...
Authors:Min, A, Sawaya, M.R, Cascio, D, Eisenberg, D, Integrated Center for Structure and Function Innovation (ISFI)
Deposit date:2009-04-28
Release date:2009-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:The crystal structure of the Rv0301-Rv0300 VapBC-3 toxin-antitoxin complex from M. tuberculosis reveals a Mg(2+) ion in the active site and a putative RNA-binding site.
Protein Sci., 21, 2012

226707

數據於2024-10-30公開中

PDB statisticsPDBj update infoContact PDBjnumon