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3AEX
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BU of 3aex by Molmil
Catalytic intermediate analogue of threonine synthase from Thermus thermophilus HB8
Descriptor: (3E)-4-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}-2-oxobut-3-enoic acid, PHOSPHATE ION, Threonine synthase
Authors:Murakawa, T, Machida, Y, Hayashi, H.
Deposit date:2010-02-13
Release date:2010-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Product-assisted catalysis as the basis of the reaction specificity of threonine synthase.
J.Biol.Chem., 286, 2011
3AEY
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BU of 3aey by Molmil
Apo form of threonine synthase from Thermus thermophilus HB8
Descriptor: SULFATE ION, Threonine synthase
Authors:Murakawa, T, Machida, Y, Hayashi, H.
Deposit date:2010-02-17
Release date:2010-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Product-assisted catalysis as the basis of the reaction specificity of threonine synthase.
J.Biol.Chem., 286, 2011
2CWV
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BU of 2cwv by Molmil
Product schiff-base intermediate of copper amine oxidase from arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2CWU
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BU of 2cwu by Molmil
Substrate schiff-base intermediate of copper amine oxidase from arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2CWT
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BU of 2cwt by Molmil
Catalytic base deletion in copper amine oxidase from arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
1WII
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BU of 1wii by Molmil
Solution structure of RSGI RUH-025, a DUF701 domain from mouse cDNA
Descriptor: Hypothetical UPF0222 protein MGC4549, ZINC ION
Authors:Abe, T, Hirota, H, Hayashi, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RSGI RUH-025, a DUF701 domain from mouse cDNA
To be Published
2E2U
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BU of 2e2u by Molmil
Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with 4-hydroxybenzylhydrazine
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Hayashi, H, Tanizawa, K.
Deposit date:2006-11-17
Release date:2007-11-20
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
2D1W
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BU of 2d1w by Molmil
Substrate Schiff-Base intermediate with tyramine in copper amine oxidase from Arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Kuroda, S, Nakamoto, T, Taki, M, Yamamoto, Y, Hayashi, H, Tanizawa, K.
Deposit date:2005-09-01
Release date:2006-05-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Quantum mechanical hydrogen tunneling in bacterial copper amine oxidase reaction
Biochem.Biophys.Res.Commun., 342, 2006
2E2V
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BU of 2e2v by Molmil
Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with benzylhydrazine
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Kuroda, S, Hayashi, H, Tanizawa, K.
Deposit date:2006-11-17
Release date:2007-11-20
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
2E2T
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BU of 2e2t by Molmil
Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with phenylhydrazine
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Kuroda, S, Hayashi, H, Tanizawa, K.
Deposit date:2006-11-17
Release date:2007-11-20
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
7QRO
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BU of 7qro by Molmil
Crystal structure of the unconventional kinetochore protein Trypanosoma brucei KKT4 BRCT domain K543A mutant
Descriptor: Trypanosoma brucei KKT4 463-645 K543A
Authors:Ludzia, P, Akiyoshi, B.
Deposit date:2022-01-11
Release date:2022-02-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:NMR study of the structure and dynamics of the BRCT domain from the kinetochore protein KKT4.
Biomol.Nmr Assign., 18, 2024
1AY4
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BU of 1ay4 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITHOUT SUBSTRATE
Descriptor: AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1997-11-14
Release date:1998-10-14
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structures of Paracoccus denitrificans aromatic amino acid aminotransferase: a substrate recognition site constructed by rearrangement of hydrogen bond network.
J.Mol.Biol., 280, 1998
1AY5
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BU of 1ay5 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE COMPLEX WITH MALEATE
Descriptor: AROMATIC AMINO ACID AMINOTRANSFERASE, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1997-11-14
Release date:1998-10-14
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of Paracoccus denitrificans aromatic amino acid aminotransferase: a substrate recognition site constructed by rearrangement of hydrogen bond network.
J.Mol.Biol., 280, 1998
1AY8
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BU of 1ay8 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE COMPLEX WITH 3-PHENYLPROPIONATE
Descriptor: AROMATIC AMINO ACID AMINOTRANSFERASE, HYDROCINNAMIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1997-11-14
Release date:1998-10-14
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of Paracoccus denitrificans aromatic amino acid aminotransferase: a substrate recognition site constructed by rearrangement of hydrogen bond network.
J.Mol.Biol., 280, 1998
7JKV
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BU of 7jkv by Molmil
Crystal Structure of SARS-CoV-2 main protease in complex with an inhibitor GRL-2420
Descriptor: 3C-like proteinase, N-[(2S)-1-({(1S,2S)-1-(1,3-benzothiazol-2-yl)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-4-methoxy-1H-indole-2-carboxamide, PENTAETHYLENE GLYCOL
Authors:Bulut, H, Hattori, S.I, Das, D, Murayama, K, Mitsuya, H.
Deposit date:2020-07-29
Release date:2020-09-23
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:A small molecule compound with an indole moiety inhibits the main protease of SARS-CoV-2 and blocks virus replication.
Nat Commun, 12, 2021
5F9E
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BU of 5f9e by Molmil
Structure of Protein Kinase C theta with compound 10: 2,2-dimethyl-7-(2-oxidanylidene-3~{H}-imidazo[4,5-b]pyridin-1-yl)-1-(phenylmethyl)-3~{H}-quinazolin-4-one
Descriptor: 2,2-dimethyl-7-(2-oxidanylidene-3~{H}-imidazo[4,5-b]pyridin-1-yl)-1-(phenylmethyl)-3~{H}-quinazolin-4-one, Protein kinase C theta type
Authors:Klein, M.
Deposit date:2015-12-09
Release date:2016-05-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery and optimization of 1,7-disubstituted-2,2-dimethyl-2,3-dihydroquinazolin-4(1H)-ones as potent and selective PKC theta inhibitors.
Bioorg.Med.Chem., 24, 2016
6E7J
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BU of 6e7j by Molmil
HIV-1 wild type protease with GRL-042-17A, 3-phenylhexahydro-2h-cyclopenta[d]oxazol-2-one with a bicyclic oxazolidinone scaffold as the P2 ligand
Descriptor: (3aS,5R,6aR)-2-oxo-3-phenylhexahydro-2H-cyclopenta[d][1,3]oxazol-5-yl [(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]carbamate, CHLORIDE ION, Protease, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2018-07-26
Release date:2018-11-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Design and Synthesis of Potent HIV-1 Protease Inhibitors Containing Bicyclic Oxazolidinone Scaffold as the P2 Ligands: Structure-Activity Studies and Biological and X-ray Structural Studies.
J. Med. Chem., 61, 2018
6E9A
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BU of 6e9a by Molmil
HIV-1 WILD TYPE PROTEASE WITH GRL-034-17A, (3aS, 5R, 6aR)-2-OXOHEXAHYD CYCLOPENTA[D]-5-OXAZOLYL URETHANE WITH A BICYCLIC OXAZOLIDINONE SCAFF AS THE P2 LIGAND
Descriptor: (3aS,5R,6aR)-2-oxohexahydro-2H-cyclopenta[d][1,3]oxazol-5-yl [(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]carbamate, CHLORIDE ION, FORMIC ACID, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2018-07-31
Release date:2018-11-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Design and Synthesis of Potent HIV-1 Protease Inhibitors Containing Bicyclic Oxazolidinone Scaffold as the P2 Ligands: Structure-Activity Studies and Biological and X-ray Structural Studies.
J. Med. Chem., 61, 2018
5ULT
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BU of 5ult by Molmil
HIV-1 wild Type protease with GRL-100-13A (a Crown-like Oxotricyclic Core as the P2-Ligand with the sulfonamide isostere as the P2' group)
Descriptor: (3S,3aR,5R,7aS,8S)-hexahydro-4H-3,5-methanofuro[2,3-b]pyran-8-yl [(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]carbamate, CHLORIDE ION, Protease, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2017-01-25
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Design and Development of Highly Potent HIV-1 Protease Inhibitors with a Crown-Like Oxotricyclic Core as the P2-Ligand To Combat Multidrug-Resistant HIV Variants.
J. Med. Chem., 60, 2017
1G4X
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BU of 1g4x by Molmil
ASPARTATE AMINOTRANSFERASE ACTIVE SITE MUTANT N194A/R292L
Descriptor: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Mizuguchi, H.
Deposit date:2000-10-29
Release date:2000-11-22
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Strain is more important than electrostatic interaction in controlling the pKa of the catalytic group in aspartate aminotransferase.
Biochemistry, 40, 2001
5XDF
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BU of 5xdf by Molmil
Homoserine dehydrogenase from Thermus thermophilus HB8 complexed with HSE
Descriptor: FORMIC ACID, Homoserine dehydrogenase, L-HOMOSERINE, ...
Authors:Akai, S, Miyahara, I.
Deposit date:2017-03-28
Release date:2017-04-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic study of homoserine dehydrogenase from Thermus thermophilus HB8
To Be Published
6DUW
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BU of 6duw by Molmil
Crystal structure of the alpha-N-catenin actin-binding domain H1 mutant
Descriptor: Catenin alpha-2
Authors:Ishiyama, N, Ikura, M.
Deposit date:2018-06-22
Release date:2018-12-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Force-dependent allostery of the alpha-catenin actin-binding domain controls adherens junction dynamics and functions.
Nat Commun, 9, 2018
6DV1
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BU of 6dv1 by Molmil
Crystal structure of the alpha-E-catenin actin-binding domain
Descriptor: BROMIDE ION, Catenin alpha-1, SULFATE ION
Authors:Ishiyama, N, Ikura, M.
Deposit date:2018-06-22
Release date:2018-12-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Force-dependent allostery of the alpha-catenin actin-binding domain controls adherens junction dynamics and functions.
Nat Commun, 9, 2018
6DUY
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BU of 6duy by Molmil
Crystal structure of the alpha-N-catenin actin-binding domain H1 mutant
Descriptor: Catenin alpha-2
Authors:Ishiyama, N, Ikura, M.
Deposit date:2018-06-22
Release date:2018-12-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Force-dependent allostery of the alpha-catenin actin-binding domain controls adherens junction dynamics and functions.
Nat Commun, 9, 2018
5HXI
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BU of 5hxi by Molmil
2-Methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, 5HN bound
Descriptor: 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, 5-hydroxypyridine-3-carboxylic acid, BETA-MERCAPTOETHANOL, ...
Authors:Kobayashi, J, Mikami, B.
Deposit date:2016-01-30
Release date:2016-10-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Role of the Tyr270 residue in 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase from Mesorhizobium loti
J. Biosci. Bioeng., 123, 2017

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數據於2025-07-09公開中

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