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Crystal structure of Siderocalin (NGAL, Lipocalin 2) complexed with Fe-BisHaCam
Descriptor:	FE (III) ION, GLYCEROL, Neutrophil gelatinase-associated lipocalin, ...
Authors:	Clifton, M.C.
Deposit date:	2009-06-17
Release date:	2010-06-02
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Parsing the functional specificity of Siderocalin / Lipocalin 2 / NGAL for siderophores and related small-molecule ligands To be Published

3K3L

Crystal structure of Siderocalin (NGAL, Lipocalin 2) complexed with apo Enterobactin
Descriptor:	2,3-DIHYDROXY-BENZOIC ACID, 2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID, CHLORIDE ION, ...
Authors:	Clifton, M.C.
Deposit date:	2009-10-02
Release date:	2010-08-18
Last modified:	2021-10-13
Method:	X-RAY DIFFRACTION (2.62 Å)
Cite:	Parsing the functional specificity of Siderocalin / Lipocalin 2 / NGAL for siderophores and related small-molecule ligands To be Published

3PEC

Siderocalin Recognitin of Carboxymycobactins: Interference by the immune system in intracellular iron acquisition by Mycobacteria tuberculosis
Descriptor:	9-{hydroxy[(5S,6R)-6-hydroxy-6-{[(1S)-3-{[(3S)-1-hydroxy-2-oxoazepan-3-yl]amino}-1-methyl-3-oxopropyl]oxy}-5-({[(4S)-2-(2-hydroxyphenyl)-4,5-dihydro-1,3-oxazol-4-yl]carbonyl}amino)hexyl]amino}-9-oxononanoic acid, FE (III) ION, GLYCEROL, ...
Authors:	Clifton, M.C.
Deposit date:	2010-10-25
Release date:	2011-10-05
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.19 Å)
Cite:	Siderocalin Recognitin of Carboxymycobactins: Interference by the immune system in intracellular iron acquisition by Mycobacteria tuberculosis To be Published

3PED

Siderocalin Recognitin of Carboxymycobactins: Interference by the immune system in intracellular iron acquisition by Mycobacteria tuberculosis
Descriptor:	(9Z)-11-{hydroxy[(5S)-6-{[(1S)-3-{[(3S)-1-hydroxy-2-oxoazepan-3-yl]amino}-1-methyl-3-oxopropyl]oxy}-5-({[(4S)-2-(2-hydroxyphenyl)-4,5-dihydro-1,3-oxazol-4-yl]carbonyl}amino)-6-oxohexyl]amino}-11-oxoundec-9-enoic acid, FE (III) ION, Neutrophil gelatinase-associated lipocalin, ...
Authors:	Clifton, M.C.
Deposit date:	2010-10-25
Release date:	2011-10-05
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Siderocalin Recognitin of Carboxymycobactins: Interference by the immune system in intracellular iron acquisition by Mycobacteria tuberculosis To be Published

3LRR

Crystal structure of human RIG-I CTD bound to a 12 bp AU rich 5' ppp dsRNA
Descriptor:	Probable ATP-dependent RNA helicase DDX58, RNA (5'-R((ATP)PUPAPUPAPUPAPUPAPUPAPU)-3'), ZINC ION
Authors:	Li, P.
Deposit date:	2010-02-11
Release date:	2010-06-02
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.15 Å)
Cite:	The Structural Basis of 5' Triphosphate Double-Stranded RNA Recognition by RIG-I C-Terminal Domain. Structure, 18, 2010

3LEF

Crystal structure of HIV epitope-scaffold 4E10_S0_1Z6NA_001
Descriptor:	1,2-ETHANEDIOL, Uncharacterized protein 4E10_S0_1Z6NA_001 (T18)
Authors:	Holmes, M.A.
Deposit date:	2010-01-14
Release date:	2010-09-22
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Computational Design of Epitope-Scaffolds Allows Induction of Antibodies Specific for a Poorly Immunogenic HIV Vaccine Epitope. Structure, 18, 2010

3LF6

Crystal structure of HIV epitope-scaffold 4E10_1XIZA_S0_001_N
Descriptor:	PHOSPHATE ION, Putative phosphotransferase system
Authors:	Holmes, M.A.
Deposit date:	2010-01-15
Release date:	2010-09-22
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Computational Design of Epitope-Scaffolds Allows Induction of Antibodies Specific for a Poorly Immunogenic HIV Vaccine Epitope. Structure, 18, 2010

3LG7

Crystal structure of HIV epitope-scaffold 4E10_S0_1EZ3A_002_C
Descriptor:	4E10_S0_1EZ3A_002_C (T246), SULFATE ION
Authors:	Holmes, M.A.
Deposit date:	2010-01-19
Release date:	2010-09-22
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Computational Design of Epitope-Scaffolds Allows Induction of Antibodies Specific for a Poorly Immunogenic HIV Vaccine Epitope. Structure, 18, 2010

3LHP

Crystal structure of HIV epitope-scaffold 4E10_D0_1ISEA_004_N 4E10 Fv complex
Descriptor:	1,2-ETHANEDIOL, 4E10_D0_1ISEA_004_N (T93), Fv 4E10 heavy chain, ...
Authors:	Holmes, M.A.
Deposit date:	2010-01-22
Release date:	2010-09-22
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	Computational Design of Epitope-Scaffolds Allows Induction of Antibodies Specific for a Poorly Immunogenic HIV Vaccine Epitope. Structure, 18, 2010

3LH2

Crystal structure of HIV epitope-scaffold 4E10_1VI7A_S0_002_N 4E10 Fv complex
Descriptor:	4E10_1VI7A_S0_002_N (T88), Fv 4E10 heavy chain, Fv 4E10 light chain
Authors:	Holmes, M.A.
Deposit date:	2010-01-21
Release date:	2010-09-22
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.65 Å)
Cite:	Computational Design of Epitope-Scaffolds Allows Induction of Antibodies Specific for a Poorly Immunogenic HIV Vaccine Epitope. Structure, 18, 2010

3LF9

Crystal structure of HIV epitope-scaffold 4E10_D0_1IS1A_001_C
Descriptor:	4E10_D0_1IS1A_001_C (T161)
Authors:	Holmes, M.A.
Deposit date:	2010-01-16
Release date:	2010-09-22
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Computational Design of Epitope-Scaffolds Allows Induction of Antibodies Specific for a Poorly Immunogenic HIV Vaccine Epitope. Structure, 18, 2010

3LRN

Crystal structure of human RIG-I CTD bound to a 14 bp GC 5' ppp dsRNA
Descriptor:	Probable ATP-dependent RNA helicase DDX58, RNA (5'-R((GTP)PGPCPGPCPGPCPGPCPGPCPGPCPC)-3'), ZINC ION
Authors:	Li, P.
Deposit date:	2010-02-11
Release date:	2010-06-02
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	The Structural Basis of 5' Triphosphate Double-Stranded RNA Recognition by RIG-I C-Terminal Domain. Structure, 18, 2010

3RPT

Crystal structure of the anti-HIV b12 scaffold protein
Descriptor:	Endoglucanase E-2, SULFATE ION
Authors:	Chen, L, Kwong, P.D.
Deposit date:	2011-04-27
Release date:	2011-12-21
Last modified:	2017-07-26
Method:	X-RAY DIFFRACTION (1.303 Å)
Cite:	Computation-guided backbone grafting of a discontinuous motif onto a protein scaffold. Science, 334, 2011

3MDS

MAGANESE SUPEROXIDE DISMUTASE FROM THERMUS THERMOPHILUS
Descriptor:	MANGANESE (III) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:	Ludwig, M.L, Metzger, A.L, Pattridge, K.A, Stallings, W.C.
Deposit date:	1993-10-20
Release date:	1994-01-31
Last modified:	2024-02-21
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Manganese superoxide dismutase from Thermus thermophilus. A structural model refined at 1.8 A resolution. J.Mol.Biol., 219, 1991

3T1D

The mutant structure of human Siderocalin W79A, R81A, Y106F bound to Enterobactin
Descriptor:	2,3-DIHYDROXY-BENZOIC ACID, 2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID, CHLORIDE ION, ...
Authors:	Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:	2011-07-21
Release date:	2011-08-17
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Parsing the functional specificity of Siderocalin/Lipocalin 2/NGAL for siderophores and related small-molecule ligands. J Struct Biol X, 2, 2019

3TF6

Crystal structure of Neutrophil gelatinase-associated lipocalin (C87S mutant) in complex with Europium and the siderophore analog tren(cam)(1,2-hopo)2
Descriptor:	2,3-DIHYDROXY-BENZOIC ACID, CHLORIDE ION, EUROPIUM ION, ...
Authors:	Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:	2011-08-15
Release date:	2011-09-07
Last modified:	2019-02-13
Method:	X-RAY DIFFRACTION (2.35 Å)
Cite:	Parsing the functional specificity of Siderocalin / Lipocalin 2 / NGAL for siderophores and related small-molecule ligands To be published, 7

3U0D

The structure of human Siderocalin bound to the bacterial siderophore 2,3-DHBA
Descriptor:	2,3-DIHYDROXY-BENZOIC ACID, CHLORIDE ION, FE (III) ION, ...
Authors:	Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:	2011-09-28
Release date:	2011-10-12
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (2.51 Å)
Cite:	Siderocalin/Lcn2/NGAL/24p3 does not drive apoptosis through gentisic acid mediated iron withdrawal in hematopoietic cell lines. Plos One, 7, 2012

4OB5

Ontogeny of recognition specificity and functionality for the broadly neutralizing anti-HIV antibody 4E10
Descriptor:	4E10 antibody germline precursor 7 heavy chain Fv, 4E10 antibody germline precursor 7 light chain Fv, GLYCEROL, ...
Authors:	Jaffe, J.B, Rupert, P.B.
Deposit date:	2014-01-06
Release date:	2014-10-08
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Ontogeny of Recognition Specificity and Functionality for the Broadly Neutralizing Anti-HIV Antibody 4E10. Plos Pathog., 10, 2014

4ODX

4E10 germline encoded precursor no.7 in complex with epitope scaffold T117
Descriptor:	4E10 epitope scaffold T117, GEP7 Fv heavy chain, GEP7 Fv light chain
Authors:	Finton, K.A.K.
Deposit date:	2014-01-10
Release date:	2014-10-08
Method:	X-RAY DIFFRACTION (3.1 Å)
Cite:	Ontogeny of Recognition Specificity and Functionality for the Broadly Neutralizing Anti-HIV Antibody 4E10. Plos Pathog., 10, 2014

4M8Q

Ontogeny of recognition specificity and functionality for the anti-HIV neutralizing antibody 4E10
Descriptor:	4E10 epitope scaffold T117, GEP1 Fv heavy chain, GEP1 Fv light chain
Authors:	Finton, K.A.K.
Deposit date:	2013-08-13
Release date:	2014-10-08
Last modified:	2018-03-07
Method:	X-RAY DIFFRACTION (2.89 Å)
Cite:	Ontogeny of Recognition Specificity and Functionality for the Broadly Neutralizing Anti-HIV Antibody 4E10. Plos Pathog., 10, 2014

4LRN

Ontogeny of recognition specificity and functionality for the anti-HIV antibody 4E10
Descriptor:	GEP 1 heavy chain, GEP 1 light chain
Authors:	Finton, K.A.K.
Deposit date:	2013-07-20
Release date:	2014-10-08
Method:	X-RAY DIFFRACTION (1.89 Å)
Cite:	Ontogeny of Recognition Specificity and Functionality for the Broadly Neutralizing Anti-HIV Antibody 4E10. Plos Pathog., 10, 2014

4M62

Ontogeny of recognition specificity and functionality for the anti-HIV neutralizing antibody 4E10
Descriptor:	GEP2 FV heavy chain, GEP2 FV light chain, SULFATE ION, ...
Authors:	Finton, K.A.K.
Deposit date:	2013-08-08
Release date:	2014-10-08
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Ontogeny of Recognition Specificity and Functionality for the Broadly Neutralizing Anti-HIV Antibody 4E10. Plos Pathog., 10, 2014

1IGI

26-10 FAB:DIGOXIN COMPLEX-AFFINITY AND SPECIFICITY DUE TO SURFACE COMPLEMENTARITY
Descriptor:	IGG2A-KAPPA 26-10 FAB (HEAVY CHAIN), IGG2A-KAPPA 26-10 FAB (LIGHT CHAIN)
Authors:	Jeffrey, P.D, Sheriff, S.
Deposit date:	1993-02-19
Release date:	1993-04-15
Last modified:	2024-06-05
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	26-10 Fab-digoxin complex: affinity and specificity due to surface complementarity. Proc.Natl.Acad.Sci.USA, 90, 1993

1IGJ

26-10 FAB:DIGOXIN COMPLEX-AFFINITY AND SPECIFICITY DUE TO SURFACE COMPLEMENTARITY
Descriptor:	DIGOXIN, IGG2A-KAPPA 26-10 FAB (HEAVY CHAIN), IGG2A-KAPPA 26-10 FAB (LIGHT CHAIN)
Authors:	Jeffrey, P.D, Sheriff, S.
Deposit date:	1993-02-19
Release date:	1993-04-15
Last modified:	2024-06-05
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	26-10 Fab-digoxin complex: affinity and specificity due to surface complementarity. Proc.Natl.Acad.Sci.USA, 90, 1993

6ATM

Exploring Cystine Dense Peptide Space to Open a Unique Molecular Toolbox
Descriptor:	Potassium channel toxin alpha-KTx 3.10
Authors:	Gewe, M.M, Rupert, P, Strong, R.K.
Deposit date:	2017-08-29
Release date:	2018-08-22
Last modified:	2019-11-06
Method:	X-RAY DIFFRACTION (2.09 Å)
Cite:	Exploring Cystine Dense Peptide Space to Open a Unique Molecular Toolbox To Be Published

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