Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5FEG
DownloadVisualize
BU of 5feg by Molmil
Crystal structure of the dimeric allergen profilin (Hev b 8)
Descriptor: Profilin-2
Authors:Mares-Mejia, I, Rodriguez-Romero, A.
Deposit date:2015-12-17
Release date:2016-09-14
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Structural insights into the IgE mediated responses induced by the allergens Hev b 8 and Zea m 12 in their dimeric forms.
Sci Rep, 6, 2016
5FEF
DownloadVisualize
BU of 5fef by Molmil
Crystal structure of the allergen profilin (Zea m 12)
Descriptor: GLYCEROL, Profilin-5
Authors:Mares-Mejia, I, Rodriguez-Romero, A.
Deposit date:2015-12-16
Release date:2016-09-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the IgE mediated responses induced by the allergens Hev b 8 and Zea m 12 in their dimeric forms.
Sci Rep, 6, 2016
8BZ3
DownloadVisualize
BU of 8bz3 by Molmil
Structure od the carbohydrate reconition domain of Gal3 in comples with SAF-2-010
Descriptor: Galectin-3, [(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-acetamido-2-(hydroxymethyl)-6-(4-nitrophenoxy)-4-oxidanyl-oxan-3-yl]oxy-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-4-yl] hydrogen sulfate
Authors:Medrano, F.J, Romero, A.
Deposit date:2022-12-14
Release date:2023-03-01
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Selectively Modified Lactose and N -Acetyllactosamine Analogs at Three Key Positions to Afford Effective Galectin-3 Ligands.
Int J Mol Sci, 24, 2023
8QWX
DownloadVisualize
BU of 8qwx by Molmil
Ligninolytic manganese peroxidase Ape-MnP1 from Agaricales mushrooms
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Santillana, E, Romero, A.
Deposit date:2023-10-20
Release date:2024-06-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-function characterization of two enzymes from novel subfamilies of manganese peroxidases secreted by the lignocellulose-degrading Agaricales fungi Agrocybe pediades and Cyathus striatus.
Biotechnol Biofuels Bioprod, 17, 2024
8QX0
DownloadVisualize
BU of 8qx0 by Molmil
Ligninolytic manganese peroxidase Ape-MnP1 from Agaricales mushrooms in complex with a manganese ion
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Santillana, E, Romero, A.
Deposit date:2023-10-20
Release date:2024-06-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.247 Å)
Cite:Structure-function characterization of two enzymes from novel subfamilies of manganese peroxidases secreted by the lignocellulose-degrading Agaricales fungi Agrocybe pediades and Cyathus striatus.
Biotechnol Biofuels Bioprod, 17, 2024
8QWT
DownloadVisualize
BU of 8qwt by Molmil
Ligninolytic manganese peroxidase Cst-MnP1 from Agaricales mushrooms in complex with a manganese ion
Descriptor: CALCIUM ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Santillana, E, Romero, A.
Deposit date:2023-10-20
Release date:2024-06-26
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-function characterization of two enzymes from novel subfamilies of manganese peroxidases secreted by the lignocellulose-degrading Agaricales fungi Agrocybe pediades and Cyathus striatus.
Biotechnol Biofuels Bioprod, 17, 2024
7R6Y
DownloadVisualize
BU of 7r6y by Molmil
E117K mutant pyruvate kinase from rabbit muscle
Descriptor: ACETATE ION, MAGNESIUM ION, OXALATE ION, ...
Authors:Rodriguez-Romero, A, Rodriguez-Hernandez, A.
Deposit date:2021-06-24
Release date:2022-05-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The K + -Dependent and -Independent Pyruvate Kinases Acquire the Active Conformation by Different Mechanisms.
Int J Mol Sci, 23, 2022
3P9T
DownloadVisualize
BU of 3p9t by Molmil
SmeT-Triclosan complex
Descriptor: Repressor, SULFATE ION, TRICLOSAN
Authors:Hernandez, A, Ruiz, F.M, Romero, A, Martinez, J.L.
Deposit date:2010-10-18
Release date:2011-08-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:The Binding of Triclosan to SmeT, the Repressor of the Multidrug Efflux Pump SmeDEF, Induces Antibiotic Resistance in Stenotrophomonas maltophilia.
Plos Pathog., 7, 2011
1M6J
DownloadVisualize
BU of 1m6j by Molmil
CRYSTAL STRUCTURE OF TRIOSEPHOSPHATE ISOMERASE FROM ENTAMOEBA HISTOLYTICA
Descriptor: Triosephosphate Isomerase
Authors:Rodriguez-Romero, A, Hernandez-Santoyo, A, Fernandez-Velasco, D.A.
Deposit date:2002-07-16
Release date:2002-10-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and Inactivation of Triosephosphate Isomerase from Entamoeba histolytica
J.Mol.Biol., 322, 2002
6UTN
DownloadVisualize
BU of 6utn by Molmil
Native E. coli Glyceraldehyde 3-phosphate dehydrogenase
Descriptor: ACETATE ION, Glyceraldehyde-3-phosphate dehydrogenase, PHOSPHATE ION, ...
Authors:Rodriguez-Hernandez, A, Romo-Arevalo, E, Rodriguez-Romero, A.
Deposit date:2019-10-29
Release date:2019-12-11
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:A Novel Substrate-Binding Site in the X-Ray Structure of an Oxidized E. coli Glyceraldehyde 3-Phosphate Dehydrogenase Elucidated by Single-Wavelength Anomalous Dispersion
Crystals, 9, 2019
6UTM
DownloadVisualize
BU of 6utm by Molmil
Native E. coli Glyceraldehyde 3-phosphate dehydrogenase
Descriptor: GLYCEROL, Glyceraldehyde-3-phosphate dehydrogenase, SN-GLYCEROL-3-PHOSPHATE, ...
Authors:Rodriguez-Hernandez, A, Romo-Arevalo, E, Rodriguez-Romero, A.
Deposit date:2019-10-29
Release date:2019-12-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:A Novel Substrate-Binding Site in the X-Ray Structure of an Oxidized E. coli Glyceraldehyde 3-Phosphate Dehydrogenase Elucidated by Single-Wavelength Anomalous Dispersion
Crystals, 9, 2019
6UTO
DownloadVisualize
BU of 6uto by Molmil
Native E. coli Glyceraldehyde 3-phosphate dehydrogenase
Descriptor: ACETATE ION, Glyceraldehyde-3-phosphate dehydrogenase, SN-GLYCEROL-3-PHOSPHATE, ...
Authors:Rodriguez-Hernandez, A, Romo-Arevalo, E, Rodriguez-Romero, A.
Deposit date:2019-10-29
Release date:2019-12-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:A Novel Substrate-Binding Site in the X-Ray Structure of an Oxidized E. coli Glyceraldehyde 3-Phosphate Dehydrogenase Elucidated by Single-Wavelength Anomalous Dispersion
Crystals, 9, 2019
4FF7
DownloadVisualize
BU of 4ff7 by Molmil
Structure of C126S mutant of Saccharomyces cerevisiae triosephosphate isomerase
Descriptor: 2-PHOSPHOGLYCOLIC ACID, GLYCEROL, PHOSPHATE ION, ...
Authors:Rodriguez-Romero, A, Hernandez-Santoyo, A.
Deposit date:2012-05-31
Release date:2012-08-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Effects of a buried cysteine-to-serine mutation on yeast triosephosphate isomerase structure and stability.
Int J Mol Sci, 13, 2012
3BDX
DownloadVisualize
BU of 3bdx by Molmil
Crystal structure of the unstable and highly fibrillogenic Pro7Ser mutant of the Recombinant variable domain 6AJL2
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, Amyloid lambda 6 light chain variable region PIP (fragment), ...
Authors:Hernandez-Santoyo, A, Fuentes-Silva, D, Del Pozo Yauner, L, Becerril, B, Rodriguez-Romero, A.
Deposit date:2007-11-15
Release date:2008-10-28
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A single mutation at the sheet switch region results in conformational changes favoring lambda6 light-chain fibrillogenesis.
J.Mol.Biol., 396, 2010
3B5G
DownloadVisualize
BU of 3b5g by Molmil
Crystal Structure of the Unstable and Highly Fibrillogenic PRO7SER Mutant of the Recombinant Variable Domain 6AJL2
Descriptor: ACETATE ION, AMYLOID LAMBDA 6 LIGHT CHAIN VARIABLE REGION PIP, GLYCEROL, ...
Authors:Hernandez-Santoyo, A, Rodriguez-Romero, A.
Deposit date:2007-10-25
Release date:2008-11-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A single mutation at the sheet switch region results in conformational changes favoring lambda6 light-chain fibrillogenesis.
J.Mol.Biol., 396, 2010
2VKA
DownloadVisualize
BU of 2vka by Molmil
Site-Directed Mutagenesis of the Catalytic Tryptophan Environment in Pleurotus eryngii Versatile Peroxidase
Descriptor: CALCIUM ION, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Ruiz-Duenas, F.J, Morales, M, Mate, M.J, Romero, A, Martinez, M.J, Smith, A, Martinez, A.T.
Deposit date:2007-12-18
Release date:2008-01-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Site-Directed Mutagenesis of the Catalytic Tryptophan Environment in Pleurotus Eryngii Versatile Peroxidase
Biochemistry, 47, 2008
1GZ2
DownloadVisualize
BU of 1gz2 by Molmil
Crystal structure of the Ovocleidin-17 a major protein of the Gallus gallus eggshell calcified layer.
Descriptor: OVOCLEIDIN-17
Authors:Reyes-Grajeda, J.P, Moreno, A, Romero, A.
Deposit date:2002-05-13
Release date:2003-05-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystallization and Preliminary X-Ray Analysis of Ovocleidin-17 a Major Protein of the Gallus Gallus Eggshell Calcified Layer
Protein Pept.Lett., 9, 2002
6VPB
DownloadVisualize
BU of 6vpb by Molmil
A novel membrane-bound 6-phosphogluconate dehydrogenase from the acetic acid bacteria Gluconacetobacter diazotrophicus (Gd6PGD)
Descriptor: 6-phosphogluconate dehydrogenase, DI(HYDROXYETHYL)ETHER, ISOPROPYL ALCOHOL, ...
Authors:Rodriguez-Romero, A, Rodriguez-Hernandez, A.
Deposit date:2020-02-02
Release date:2020-07-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:The structure of a novel membrane-associated 6-phosphogluconate dehydrogenase from Gluconacetobacter diazotrophicus (Gd6PGD) reveals a subfamily of short-chain 6PGDs.
Febs J., 288, 2021
1AZW
DownloadVisualize
BU of 1azw by Molmil
PROLINE IMINOPEPTIDASE FROM XANTHOMONAS CAMPESTRIS PV. CITRI
Descriptor: PROLINE IMINOPEPTIDASE
Authors:Medrano, F.J, Alonso, J, Garcia, J.L, Romero, A, Bode, W, Gomis-Ruth, F.X.
Deposit date:1997-11-22
Release date:1999-01-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of proline iminopeptidase from Xanthomonas campestris pv. citri: a prototype for the prolyl oligopeptidase family.
EMBO J., 17, 1998
2W53
DownloadVisualize
BU of 2w53 by Molmil
Structure of SmeT, the repressor of the Stenotrophomonas maltophilia multidrug efflux pump SmeDEF.
Descriptor: REPRESSOR, SULFATE ION
Authors:Mate, M.J, Romero, A, Hernandez, A, Martinez, J.L.
Deposit date:2008-12-04
Release date:2009-04-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Functional Analysis of Smet, the Repressor of the Stenotrophomonas Maltophilia Multidrug Efflux Pump Smedef.
J.Biol.Chem., 284, 2009
6UL3
DownloadVisualize
BU of 6ul3 by Molmil
Crystal structure of a lysozyme from Litopenaeus vannamei
Descriptor: Lysozyme
Authors:Hernandez-Santoyo, A, Rodriguez-Romero, A.
Deposit date:2019-10-06
Release date:2020-03-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of a C-type lysozyme from Litopenaeus vanamei exhibiting a high binding constant to its chitotriose inhibitor.
Fish Shellfish Immunol., 100, 2020
6UKC
DownloadVisualize
BU of 6ukc by Molmil
Crystal structure of a lysozyme from Litopenaeus vannamei
Descriptor: GLYCEROL, Lysozyme
Authors:Hernandez-Santoyo, A, Rodriguez-Romero, A.
Deposit date:2019-10-04
Release date:2020-03-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of a C-type lysozyme from Litopenaeus vanamei exhibiting a high binding constant to its chitotriose inhibitor.
Fish Shellfish Immunol., 100, 2020
1HKN
DownloadVisualize
BU of 1hkn by Molmil
A complex between acidic fibroblast growth factor and 5-amino-2-naphthalenesulfonate
Descriptor: 5-AMINO-NAPHTALENE-2-MONOSULFONATE, HEPARIN-BINDING GROWTH FACTOR 1
Authors:Fernandez-Tornero, C, Lozano, R.M, Gimenez-Gallego, G, Romero, A.
Deposit date:2003-03-10
Release date:2004-03-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Leads for Development of New Naphthalenesulfonate Derivatives with Enhanced Antiangiogenic Activity: Crystal Structure of Acidic Fibroblast Growth Factor in Complex with 5-Amino-2-Naphthalenesulfonate
J.Biol.Chem., 278, 2003
8V0A
DownloadVisualize
BU of 8v0a by Molmil
Crystal Structure of the worst case of the reconstruction of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by maximum likelihood with PGH
Descriptor: PHOSPHOGLYCOLOHYDROXAMIC ACID, Triosephosphate isomerase
Authors:Perez-Nino, J.A, Rodriguez-Romero, A, Guerra-Borrego, Y, Fernandez-Velasco, D.A.
Deposit date:2023-11-17
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Stable monomers in the ancestral sequence reconstruction of the last opisthokont common ancestor of dimeric triosephosphate isomerase.
Protein Sci., 33, 2024
8V2X
DownloadVisualize
BU of 8v2x by Molmil
Crystal Structure of the reconstruction of the worst case of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by bayesian inference
Descriptor: Triosephosphate isomerase
Authors:Perez-Nino, J.A, Rodriguez-Romero, A, Guerra-Borrego, Y, Fernandez-Velasco, D.A.
Deposit date:2023-11-24
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Stable monomers in the ancestral sequence reconstruction of the last opisthokont common ancestor of dimeric triosephosphate isomerase.
Protein Sci., 33, 2024

238582

數據於2025-07-09公開中

PDB statisticsPDBj update infoContact PDBjnumon