Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4TR8
DownloadVisualize
BU of 4tr8 by Molmil
Crystal structure of DNA polymerase sliding clamp from Pseudomonas aeruginosa
Descriptor: DNA polymerase III subunit beta, SODIUM ION
Authors:Olieric, V, Burnouf, D, Ennifar, E, Wolff, P.
Deposit date:2014-06-15
Release date:2014-09-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins.
J.Med.Chem., 57, 2014
4TR6
DownloadVisualize
BU of 4tr6 by Molmil
Crystal structure of DNA polymerase sliding clamp from Bacillus subtilis
Descriptor: DNA polymerase III subunit beta, SODIUM ION
Authors:Burnouf, D, Olieric, V, Ennifar, E, Wolff, P.
Deposit date:2014-06-14
Release date:2014-09-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins.
J.Med.Chem., 57, 2014
4TSZ
DownloadVisualize
BU of 4tsz by Molmil
Crystal structure of DNA polymerase sliding clamp from Pseudomonas aeruginosa with ligand
Descriptor: ACE-GLN-ALC-ASP-LEU-ZCL peptide, DNA polymerase III subunit beta
Authors:Olieric, V, Burnouf, D, Ennifar, E, Wolff, P.
Deposit date:2014-06-19
Release date:2014-09-10
Last modified:2016-12-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins.
J.Med.Chem., 57, 2014
6G05
DownloadVisualize
BU of 6g05 by Molmil
RORGT (264-518;C455S) IN COMPLEX WITH INVERSE AGONIST "CPD-2" AND RIP140 PEPTIDE AT 1.90A
Descriptor: 2-(4-ethylsulfonylphenyl)-~{N}-[4-phenyl-5-(phenylcarbonyl)-1,3-thiazol-2-yl]ethanamide, Nuclear receptor ROR-gamma, Nuclear receptor-interacting protein 1
Authors:Kallen, J.
Deposit date:2018-03-16
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Optimizing a Weakly Binding Fragment into a Potent ROR gamma t Inverse Agonist with Efficacy in an in Vivo Inflammation Model.
J. Med. Chem., 61, 2018
6G07
DownloadVisualize
BU of 6g07 by Molmil
RORGT (264-518;C455S) IN COMPLEX WITH INVERSE AGONIST "CPD-9" AND RIP140 PEPTIDE AT 1.66A
Descriptor: Nuclear receptor ROR-gamma, Nuclear receptor-interacting protein 1, ~{N}-[5-chloranyl-6-[(1~{S})-1-phenylethoxy]pyridin-3-yl]-2-(4-ethylsulfonylphenyl)ethanamide
Authors:Kallen, J.
Deposit date:2018-03-16
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Optimizing a Weakly Binding Fragment into a Potent ROR gamma t Inverse Agonist with Efficacy in an in Vivo Inflammation Model.
J. Med. Chem., 61, 2018
6FZU
DownloadVisualize
BU of 6fzu by Molmil
RORGT (264-518;C455S) IN COMPLEX WITH THE FRAGMENT ("CPD-1") AND RIP140 PEPTIDE AT 1.80A
Descriptor: Nuclear receptor ROR-gamma, Nuclear receptor-interacting protein 1, ~{N}-(3-chloranyl-4-ethoxy-phenyl)ethanamide
Authors:Kallen, J.
Deposit date:2018-03-15
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Optimizing a Weakly Binding Fragment into a Potent ROR gamma t Inverse Agonist with Efficacy in an in Vivo Inflammation Model.
J. Med. Chem., 61, 2018
5SXG
DownloadVisualize
BU of 5sxg by Molmil
Crystal Structure of the Cancer Genomic DNA Mutator APOBEC3B
Descriptor: 1,3-PROPANDIOL, DNA dC->dU-editing enzyme APOBEC-3B, IMIDAZOLE, ...
Authors:Shi, K, Kurahashi, K, Aihara, H.
Deposit date:2016-08-09
Release date:2017-12-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Conformational Switch Regulates the DNA Cytosine Deaminase Activity of Human APOBEC3B.
Sci Rep, 7, 2017
5SXH
DownloadVisualize
BU of 5sxh by Molmil
Crystal Structure of the Cancer Genomic DNA Mutator APOBEC3B
Descriptor: 1,2-ETHANEDIOL, DNA dC->dU-editing enzyme APOBEC-3B, ZINC ION
Authors:Shi, K, Kurahashi, K, Aihara, H.
Deposit date:2016-08-09
Release date:2017-12-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Conformational Switch Regulates the DNA Cytosine Deaminase Activity of Human APOBEC3B.
Sci Rep, 7, 2017
5FAH
DownloadVisualize
BU of 5fah by Molmil
KALLIKREIN-7 IN COMPLEX WITH COMPOUND1
Descriptor: (2~{S})-~{N}2-[2-(4-methoxyphenyl)ethyl]-~{N}1-(naphthalen-1-ylmethyl)pyrrolidine-1,2-dicarboxamide, ACETATE ION, Kallikrein-7
Authors:Ostermann, N, Zink, F.
Deposit date:2015-12-11
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Small-molecule factor D inhibitors targeting the alternative complement pathway.
Nat.Chem.Biol., 12, 2016
5FCK
DownloadVisualize
BU of 5fck by Molmil
COMPLEMENT FACTOR D IN COMPLEX WITH COMPOUND 5
Descriptor: 1-[2-[(1~{R},3~{S},5~{R})-3-[[(1~{R})-1-(3-chloranyl-2-fluoranyl-phenyl)ethyl]carbamoyl]-2-azabicyclo[3.1.0]hexan-2-yl]-2-oxidanylidene-ethyl]pyrazolo[3,4-c]pyridine-3-carboxamide, Complement factor D, SULFATE ION
Authors:Mac Sweeney, A.
Deposit date:2015-12-15
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Small-molecule factor D inhibitors targeting the alternative complement pathway.
Nat.Chem.Biol., 12, 2016
5FBE
DownloadVisualize
BU of 5fbe by Molmil
COMPLEMENT FACTOR D IN COMPLEX WITH COMPOUND2
Descriptor: Complement factor D, GLYCEROL, methyl 2-[[[(2~{S})-2-[[3-(trifluoromethyloxy)phenyl]carbamoyl]pyrrolidin-1-yl]carbonylamino]methyl]benzoate
Authors:Ostermann, N, Zink, F.
Deposit date:2015-12-14
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Small-molecule factor D inhibitors targeting the alternative complement pathway.
Nat.Chem.Biol., 12, 2016
5FCR
DownloadVisualize
BU of 5fcr by Molmil
MOUSE COMPLEMENT FACTOR D
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Complement factor D, DIMETHYL SULFOXIDE, ...
Authors:Mac Sweeney, A.
Deposit date:2015-12-15
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Small-molecule factor D inhibitors targeting the alternative complement pathway.
Nat.Chem.Biol., 12, 2016
5FBI
DownloadVisualize
BU of 5fbi by Molmil
COMPLEMENT FACTOR D IN COMPLEX WITH COMPOUND 3b
Descriptor: 3-[(2-aminocarbonyl-1~{H}-indol-5-yl)oxymethyl]benzoic acid, Complement factor D, GLYCEROL
Authors:Ostermann, N, Zink, F.
Deposit date:2015-12-14
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Small-molecule factor D inhibitors targeting the alternative complement pathway.
Nat.Chem.Biol., 12, 2016
4IK0
DownloadVisualize
BU of 4ik0 by Molmil
Crystal structure of diaminopimelate epimerase Y268A mutant from Escherichia coli
Descriptor: Diaminopimelate epimerase, IODIDE ION
Authors:Hor, L, Dobson, R.C.J, Hutton, C.A, Perugini, M.A.
Deposit date:2012-12-24
Release date:2013-02-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Dimerization of bacterial diaminopimelate epimerase is essential for catalysis
J.Biol.Chem., 288, 2013
4IJZ
DownloadVisualize
BU of 4ijz by Molmil
Crystal structure of diaminopimelate epimerase from Escherichia coli
Descriptor: Diaminopimelate epimerase, NITRATE ION
Authors:Hor, L, Dobson, R.C.J, Hutton, C.A, Perugini, M.A.
Deposit date:2012-12-24
Release date:2013-02-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dimerization of bacterial diaminopimelate epimerase is essential for catalysis
J.Biol.Chem., 288, 2013
2FLO
DownloadVisualize
BU of 2flo by Molmil
Crystal structure of exopolyphosphatase (PPX) from E. coli O157:H7
Descriptor: Exopolyphosphatase
Authors:Rangarajan, E.S, Cygler, M, Matte, A, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2006-01-06
Release date:2006-06-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Structure of the Exopolyphosphatase (PPX) from Escherichia coli O157:H7 Suggests a Binding Mode for Long Polyphosphate Chains.
J.Mol.Biol., 359, 2006
2FPU
DownloadVisualize
BU of 2fpu by Molmil
Crystal Structure of the N-terminal domain of E.coli HisB- Complex with histidinol
Descriptor: CHLORIDE ION, Histidine biosynthesis bifunctional protein hisB, L-histidinol, ...
Authors:Rangarajan, E.S, Cygler, M, Matte, A, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2006-01-17
Release date:2006-09-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural snapshots of Escherichia coli histidinol phosphate phosphatase along the reaction pathway.
J.Biol.Chem., 281, 2006
2FPX
DownloadVisualize
BU of 2fpx by Molmil
Crystal Structure of the N-terminal Domain of E.coli HisB- Sulfate complex.
Descriptor: Histidine biosynthesis bifunctional protein hisB, MAGNESIUM ION, SULFATE ION, ...
Authors:Rangarajan, E.S, Cygler, M, Matte, A, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2006-01-17
Release date:2006-09-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural snapshots of Escherichia coli histidinol phosphate phosphatase along the reaction pathway.
J.Biol.Chem., 281, 2006
2FPW
DownloadVisualize
BU of 2fpw by Molmil
Crystal Structure of the N-terminal Domain of E.coli HisB- Phosphoaspartate intermediate.
Descriptor: CALCIUM ION, Histidine biosynthesis bifunctional protein hisB, ZINC ION
Authors:Rangarajan, E.S, Cygler, M, Matte, A, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2006-01-17
Release date:2006-09-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural snapshots of Escherichia coli histidinol phosphate phosphatase along the reaction pathway.
J.Biol.Chem., 281, 2006
2FPS
DownloadVisualize
BU of 2fps by Molmil
Crystal structure of the N-terminal domain of E.coli HisB- Apo Ca model.
Descriptor: CALCIUM ION, CHLORIDE ION, Histidine biosynthesis bifunctional protein hisB, ...
Authors:Rangarajan, E.S, Cygler, M, Matte, A, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2006-01-17
Release date:2006-09-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural snapshots of Escherichia coli histidinol phosphate phosphatase along the reaction pathway.
J.Biol.Chem., 281, 2006
2FPR
DownloadVisualize
BU of 2fpr by Molmil
Crystal structure the N-terminal domain of E. coli HisB. Apo Mg model.
Descriptor: BROMIDE ION, Histidine biosynthesis bifunctional protein hisB, MAGNESIUM ION, ...
Authors:Rangarajan, E.S, Cygler, M, Matte, A, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2006-01-17
Release date:2006-09-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural snapshots of Escherichia coli histidinol phosphate phosphatase along the reaction pathway.
J.Biol.Chem., 281, 2006
3BE5
DownloadVisualize
BU of 3be5 by Molmil
Crystal structure of FitE (crystal form 1), a group III periplasmic siderophore binding protein
Descriptor: CHLORIDE ION, Putative iron compound-binding protein of ABC transporter family
Authors:Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2007-11-16
Release date:2008-10-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Trapping open and closed forms of FitE-A group III periplasmic binding protein.
Proteins, 75, 2008
3BE6
DownloadVisualize
BU of 3be6 by Molmil
Crystal structure of FitE (crystal form 2), a group III periplasmic siderophore binding protein
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2007-11-16
Release date:2008-10-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Trapping open and closed forms of FitE-A group III periplasmic binding protein.
Proteins, 75, 2008
2J3R
DownloadVisualize
BU of 2j3r by Molmil
The crystal structure of the bet3-trs31 heterodimer.
Descriptor: NITRATE ION, PALMITIC ACID, TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3, ...
Authors:Kim, Y.-G, Oh, B.-H.
Deposit date:2006-08-23
Release date:2006-11-27
Last modified:2011-10-26
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Architecture of the Multisubunit Trapp I Complex Suggests a Model for Vesicle Tethering.
Cell(Cambridge,Mass.), 127, 2006
2J3T
DownloadVisualize
BU of 2j3t by Molmil
The crystal structure of the bet3-trs33-bet5-trs23 complex.
Descriptor: PALMITIC ACID, TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1, TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3, ...
Authors:Kim, Y, Oh, B.
Deposit date:2006-08-23
Release date:2006-11-22
Last modified:2011-10-26
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Architecture of the Multisubunit Trapp I Complex Suggests a Model for Vesicle Tethering.
Cell(Cambridge,Mass.), 127, 2006

224201

數據於2024-08-28公開中

PDB statisticsPDBj update infoContact PDBjnumon