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1GBB
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BU of 1gbb by Molmil
Alpha-lytic protease with met 190 replaced by ALA AND GLY 216 replaced by ALA complex with METHOXYSUCCINYL-ALA-ALA-PRO-ALANINE BORONIC ACID
Descriptor: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-ALANINE BORONIC ACID INHIBITOR, SULFATE ION
Authors:Mace, J.E, Agard, D.A.
Deposit date:1995-09-06
Release date:1996-01-29
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Kinetic and structural characterization of mutations of glycine 216 in alpha-lytic protease: a new target for engineering substrate specificity.
J.Mol.Biol., 254, 1995
1GBM
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BU of 1gbm by Molmil
ALPHA-LYTIC PROTEASE WITH MET 190 REPLACED BY ALA COMPLEX WITH METHOXYSUCCINYL-ALA-ALA-PRO-PHENYLALANINE BORONIC ACID
Descriptor: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-PHENYLALANINE BORONIC ACID INHIBITOR, SULFATE ION
Authors:Mace, J.E, Agard, D.A.
Deposit date:1995-09-06
Release date:1996-01-29
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Kinetic and structural characterization of mutations of glycine 216 in alpha-lytic protease: a new target for engineering substrate specificity.
J.Mol.Biol., 254, 1995
1P01
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BU of 1p01 by Molmil
Serine protease mechanism. structure of an inhibitory complex oF ALPHA-LYTIC Protease and a tightly bound peptide boronic acid
Descriptor: ALPHA-LYTIC PROTEASE, N-(tert-butoxycarbonyl)-L-alanyl-N-[(1R)-1-(dihydroxyboranyl)-2-methylpropyl]-L-prolinamide, SULFATE ION
Authors:Bone, R, Agard, D.A.
Deposit date:1989-04-24
Release date:1990-04-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Serine protease mechanism: structure of an inhibitory complex of alpha-lytic protease and a tightly bound peptide boronic acid.
Biochemistry, 26, 1987
1P10
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BU of 1p10 by Molmil
STRUCTURAL PLASTICITY AS A DETERMINANT OF ENZYME SPECIFICITY. CREATING BROADLY SPECIFIC PROTEASES
Descriptor: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-VALINE BORONIC ACID INHIBITOR, SULFATE ION
Authors:Bone, R, Agard, D.A.
Deposit date:1989-04-24
Release date:1990-04-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural plasticity broadens the specificity of an engineered protease.
Nature, 339, 1989
1P09
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BU of 1p09 by Molmil
STRUCTURAL PLASTICITY AS A DETERMINANT OF ENZYME SPECIFICITY. CREATING BROADLY SPECIFIC PROTEASES
Descriptor: ALPHA-LYTIC PROTEASE, SULFATE ION
Authors:Bone, R, Agard, D.A.
Deposit date:1989-04-24
Release date:1990-04-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural plasticity broadens the specificity of an engineered protease.
Nature, 339, 1989
8TO0
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BU of 8to0 by Molmil
48-nm repeating structure of doublets from mouse sperm flagella
Descriptor: Cilia- and flagella- associated protein 210, Cilia- and flagella-associated protein 107, Cilia- and flagella-associated protein 141, ...
Authors:Chen, Z, Shiozak, M, Hass, K.M, Skinner, W, Zhao, S, Guo, C, Polacco, B.J, Yu, Z, Krogan, N.J, Kaake, R.M, Vale, R.D, Agard, D.A.
Deposit date:2023-08-02
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:De novo protein identification in mammalian sperm using in situ cryoelectron tomography and AlphaFold2 docking.
Cell, 186, 2023
1LE4
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BU of 1le4 by Molmil
STRUCTURAL BASIS FOR ALTERED FUNCTION IN THE COMMON MUTANTS OF HUMAN APOLIPOPROTEIN-E
Descriptor: APOLIPOPROTEIN E4
Authors:Wilson, C, Agard, D.A.
Deposit date:1991-08-22
Release date:1992-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human apolipoprotein E. Role of arginine 61 in mediating the lipoprotein preferences of the E3 and E4 isoforms.
J.Biol.Chem., 269, 1994
1LE2
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BU of 1le2 by Molmil
STRUCTURAL BASIS FOR ALTERED FUNCTION IN THE COMMON MUTANTS OF HUMAN APOLIPOPROTEIN-E
Descriptor: APOLIPOPROTEIN E2
Authors:Wilson, C, Agard, D.A.
Deposit date:1991-08-22
Release date:1992-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Salt bridge relay triggers defective LDL receptor binding by a mutant apolipoprotein.
Structure, 2, 1994
1Z5V
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BU of 1z5v by Molmil
Crystal structure of human gamma-tubulin bound to GTPgammaS
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Tubulin gamma-1 chain
Authors:Aldaz, H.A, Rice, L.M, Stearns, T, Agard, D.A.
Deposit date:2005-03-20
Release date:2005-05-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Insights into microtubule nucleation from the crystal structure of human gamma-tubulin.
Nature, 435, 2005
1Z5W
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BU of 1z5w by Molmil
Crystal Structure of gamma-tubulin bound to GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Tubulin gamma-1 chain
Authors:Aldaz, H.A, Rice, L.M, Stearns, T, Agard, D.A.
Deposit date:2005-03-20
Release date:2005-05-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Insights into microtubule nucleation from the crystal structure of human gamma-tubulin.
Nature, 435, 2005
4M1X
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BU of 4m1x by Molmil
Tetrameric ring structure of 201phi2-1p060 from Pseudomonas phage 201phi2-1
Descriptor: DI(HYDROXYETHYL)ETHER, uncharacterized protein 201phi2-1p060
Authors:Partridge, J.R, Zehr, E.A, Agard, D.A.
Deposit date:2013-08-04
Release date:2014-08-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Tetrameric ring structure of 201phi2-1p060 from Pseudomonas phage 201phi2-1
To be Published
5FM1
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BU of 5fm1 by Molmil
Structure of gamma-tubulin small complex based on a cryo-EM map, chemical cross-links, and a remotely related structure
Descriptor: SPINDLE POLE BODY COMPONENT 110, SPINDLE POLE BODY COMPONENT SPC97, SPINDLE POLE BODY COMPONENT SPC98, ...
Authors:Greenberg, C.H, Kollman, J, Zelter, A, Johnson, R, MacCoss, M.J, Davis, T.N, Agard, D.A, Sali, A.
Deposit date:2015-10-30
Release date:2016-02-03
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Structure of Gamma-Tubulin Small Complex Based on a Cryo-Em Map, Chemical Cross-Links, and a Remotely Related Structure.
J.Struct.Biol., 194, 2016
5FLZ
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BU of 5flz by Molmil
Cryo-EM structure of gamma-TuSC oligomers in a closed conformation
Descriptor: SPINDLE POLE BODY COMPONENT 110, SPINDLE POLE BODY COMPONENT SPC97, SPINDLE POLE BODY COMPONENT SPC98, ...
Authors:Greenberg, C.H, Kollman, J, Zelter, A, Johnson, R, MacCoss, M.J, Davis, T.N, Agard, D.A, Sali, A.
Deposit date:2015-10-29
Release date:2016-01-13
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Structure of Gamma-Tubulin Small Complex Based on a Cryo-Em Map, Chemical Cross-Links, and a Remotely Related Structure.
J.Struct.Biol., 194, 2016
4PRO
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BU of 4pro by Molmil
ALPHA-LYTIC PROTEASE COMPLEXED WITH PRO REGION
Descriptor: ALPHA-LYTIC PROTEASE
Authors:Sauter, N.K, Mau, T, Rader, S.D, Agard, D.A.
Deposit date:1998-10-01
Release date:1999-05-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of alpha-lytic protease complexed with its pro region.
Nat.Struct.Biol., 5, 1998
7LPR
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BU of 7lpr by Molmil
STRUCTURAL BASIS FOR BROAD SPECIFICITY IN ALPHA-LYTIC PROTEASE MUTANTS
Descriptor: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-LEUCINE BORONIC ACID INHIBITOR, SULFATE ION
Authors:Fujishige, A, Bone, R, Agard, D.A.
Deposit date:1991-08-05
Release date:1993-01-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for broad specificity in alpha-lytic protease mutants.
Biochemistry, 30, 1991
1L2I
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BU of 1l2i by Molmil
Human Estrogen Receptor alpha Ligand-binding Domain in Complex with (R,R)-5,11-cis-diethyl-5,6,11,12-tetrahydrochrysene-2,8-diol and a Glucocorticoid Receptor Interacting Protein 1 NR box II Peptide
Descriptor: (R,R)-5,11-CIS-DIETHYL-5,6,11,12-TETRAHYDROCHRYSENE-2,8-DIOL, CHLORIDE ION, ESTROGEN RECEPTOR, ...
Authors:Shiau, A.K, Barstad, D, Radek, J.T, Meyers, M.J, Nettles, K.W, Katzenellenbogen, B.S, Katzenellenbogen, J.A, Agard, D.A, Greene, G.L.
Deposit date:2002-02-21
Release date:2002-05-01
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural characterization of a subtype-selective ligand reveals a novel mode of estrogen receptor antagonism.
Nat.Struct.Biol., 9, 2002
1LPE
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BU of 1lpe by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE LDL RECEPTOR-BINDING DOMAIN OF HUMAN APOLIPOPROTEIN E
Descriptor: APOLIPOPROTEIN E3
Authors:Wilson, C, Agard, D.A.
Deposit date:1991-08-22
Release date:1992-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Three-dimensional structure of the LDL receptor-binding domain of human apolipoprotein E.
Science, 252, 1991
4IPE
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BU of 4ipe by Molmil
Crystal structure of mitochondrial Hsp90 (TRAP1) with AMPPNP
Descriptor: COBALT (II) ION, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Partridge, J.R, Lavery, L.A, Agard, D.A.
Deposit date:2013-01-09
Release date:2014-01-22
Last modified:2014-08-27
Method:X-RAY DIFFRACTION (2.289 Å)
Cite:Structural asymmetry in the closed state of mitochondrial Hsp90 (TRAP1) supports a two-step ATP hydrolysis mechanism.
Mol.Cell, 53, 2014
4IYN
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BU of 4iyn by Molmil
Structure of mitochondrial Hsp90 (TRAP1) with ADP-ALF4-
Descriptor: ADENOSINE-5'-DIPHOSPHATE, COBALT (II) ION, MAGNESIUM ION, ...
Authors:Partridge, J.R, Lavery, L.A, Agard, D.A.
Deposit date:2013-01-28
Release date:2014-01-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.312 Å)
Cite:Structural asymmetry in the closed state of mitochondrial Hsp90 (TRAP1) supports a two-step ATP hydrolysis mechanism.
Mol.Cell, 53, 2014
4J0B
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BU of 4j0b by Molmil
Structure of mitochondrial Hsp90 (TRAP1) with ADP-BeF3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, COBALT (II) ION, ...
Authors:Partridge, J.R, Lavery, L.A, Agard, D.A.
Deposit date:2013-01-30
Release date:2014-01-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.352 Å)
Cite:Structural asymmetry in the closed state of mitochondrial Hsp90 (TRAP1) supports a two-step ATP hydrolysis mechanism.
Mol.Cell, 53, 2014
4IVG
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BU of 4ivg by Molmil
Crystal structure of mitochondrial Hsp90 (TRAP1) NTD-Middle domain dimer with AMPPNP
Descriptor: MAGNESIUM ION, PHOSPHATE ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Partridge, J.R, Lavery, L.A, Agard, D.A.
Deposit date:2013-01-22
Release date:2014-01-22
Last modified:2014-08-27
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:Structural asymmetry in the closed state of mitochondrial Hsp90 (TRAP1) supports a two-step ATP hydrolysis mechanism.
Mol.Cell, 53, 2014
3ERD
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BU of 3erd by Molmil
HUMAN ESTROGEN RECEPTOR ALPHA LIGAND-BINDING DOMAIN IN COMPLEX WITH DIETHYLSTILBESTROL AND A GLUCOCORTICOID RECEPTOR INTERACTING PROTEIN 1 NR BOX II PEPTIDE
Descriptor: ACETIC ACID, CHLORIDE ION, DIETHYLSTILBESTROL, ...
Authors:Shiau, A.K, Barstad, D, Loria, P.M, Cheng, L, Kushner, P.J, Agard, D.A, Greene, G.L.
Deposit date:1999-03-31
Release date:1999-04-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:The structural basis of estrogen receptor/coactivator recognition and the antagonism of this interaction by tamoxifen.
Cell(Cambridge,Mass.), 95, 1998
3ERT
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BU of 3ert by Molmil
HUMAN ESTROGEN RECEPTOR ALPHA LIGAND-BINDING DOMAIN IN COMPLEX WITH 4-HYDROXYTAMOXIFEN
Descriptor: 4-HYDROXYTAMOXIFEN, PROTEIN (ESTROGEN RECEPTOR ALPHA)
Authors:Shiau, A.K, Barstad, D, Loria, P.M, Cheng, L, Kushner, P.J, Agard, D.A, Greene, G.L.
Deposit date:1999-03-30
Release date:1999-04-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structural basis of estrogen receptor/coactivator recognition and the antagonism of this interaction by tamoxifen.
Cell(Cambridge,Mass.), 95, 1998
5TTH
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BU of 5tth by Molmil
Heterodimeric SpyCatcher/SpyTag-fused zebrafish TRAP1 in ATP/ADP-hybrid state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, C-terminal SpyCatcher fusion of wildtype zebrafish TNF receptor-associated protein 1, ...
Authors:Elnatan, D, Betegon, M, Liu, Y, Agard, D.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2016-11-03
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Symmetry broken and rebroken during the ATP hydrolysis cycle of the mitochondrial Hsp90 TRAP1.
Elife, 6, 2017
5TVX
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BU of 5tvx by Molmil
Crystal structure of mitochondrial Hsp90 (TRAP1) with ATP in absence of Mg, fully hydrolyzed
Descriptor: ADENOSINE-5'-DIPHOSPHATE, TNF receptor-associated protein 1
Authors:Elnatan, D, Betegon, M, Agard, D.A.
Deposit date:2016-11-10
Release date:2017-10-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Symmetry broken and rebroken during the ATP hydrolysis cycle of the mitochondrial Hsp90 TRAP1.
Elife, 6, 2017

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數據於2024-08-21公開中

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