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Crystal structure of the class A carbapenemase KPC-2 at 1.6 angstrom resolution
Descriptor:	Class A carbapenemase KPC-2
Authors:	Petrella, S, Ziental-Gelus, N, Mayer, C, Jarlier, V, Sougakoff, W.
Deposit date:	2008-07-21
Release date:	2008-07-29
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Genetic and structural insights into the dissemination potential of the extremely broad-spectrum class A beta-lactamase KPC-2 identified in an Escherichia coli strain and an Enterobacter cloacae strain isolated from the same patient in France. Antimicrob.Agents Chemother., 52, 2008

3EQ4

Model of tRNA(Leu)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EM
Descriptor:	30S ribosomal protein S12, 50S ribosomal protein L11, Elongation factor Tu, ...
Authors:	Frank, J, Li, W, Agirrezabala, X.
Deposit date:	2008-09-30
Release date:	2008-12-16
Last modified:	2024-02-21
Method:	ELECTRON MICROSCOPY (12 Å)
Cite:	Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM. Embo J., 27, 2008

1OEJ

YodA from Escherichia coli crystallised with no added ions
Descriptor:	HYPOTHETICAL PROTEIN YODA, NICKEL (II) ION
Authors:	David, G, Blondeau, K, Renouard, M, Penel, S, Lewit-Bentley, A.
Deposit date:	2003-03-27
Release date:	2003-08-15
Last modified:	2023-12-13
Method:	X-RAY DIFFRACTION (1.81 Å)
Cite:	Yoda from Escherichia Coli is a Metal-Binding, Lipocalin-Like Protein J.Biol.Chem., 278, 2003

1QL7

FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN
Descriptor:	CALCIUM ION, SULFATE ION, TRYPSIN, ...
Authors:	Stubbs, M.T.
Deposit date:	1999-08-24
Release date:	2000-08-25
Last modified:	2017-07-05
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Ph-Dependent Binding Modes Observed in Trypsin Crystals: Lessons for the Structure-Based Drug Design Chembiochem, 3, 2002

1OEE

YodA from Escherichia coli crystallised with cadmium ions
Descriptor:	CADMIUM ION, HYPOTHETICAL PROTEIN YODA
Authors:	David, G, Blondeau, K, Renouard, M, Penel, S, Lewit-Bentley, A.
Deposit date:	2003-03-27
Release date:	2003-08-15
Last modified:	2024-05-01
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Yoda from Escherichia Coli is a Metal-Binding, Lipocalin-Like Protein J.Biol.Chem., 278, 2003

5NNJ

Dimer structure of Sortilin ectodomain crystal form 3, 4.0 Angstrom
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Sortilin, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:	Leloup, N.O.L, Janssen, B.J.C.
Deposit date:	2017-04-09
Release date:	2017-11-29
Last modified:	2024-01-17
Method:	X-RAY DIFFRACTION (4 Å)
Cite:	Low pH-induced conformational change and dimerization of sortilin triggers endocytosed ligand release. Nat Commun, 8, 2017

5NMR

Monomeric mouse Sortilin extracellular domain
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:	Leloup, N.O.L, Loessl, P, Meijer, D.H.M, Heck, A.J.R, Thies-Weesie, D.M.E, Janssen, B.J.C.
Deposit date:	2017-04-07
Release date:	2017-12-06
Last modified:	2024-01-17
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Low pH-induced conformational change and dimerization of sortilin triggers endocytosed ligand release. Nat Commun, 8, 2017

5NHW

CRYSTAL STRUCTURE OF THE BIMAGRUMAB Fab
Descriptor:	GLYCEROL, anti-human ActRII Bimagrumab Fab heavy-chain, anti-human ActRII Bimagrumab Fab light-chain
Authors:	Rondeau, J.-M.
Deposit date:	2017-03-22
Release date:	2017-11-15
Last modified:	2024-01-17
Method:	X-RAY DIFFRACTION (1.78 Å)
Cite:	Blockade of activin type II receptors with a dual anti-ActRIIA/IIB antibody is critical to promote maximal skeletal muscle hypertrophy. Proc. Natl. Acad. Sci. U.S.A., 114, 2017

5NH3

CRYSTAL STRUCTURE OF THE Activin receptor type-2A LIGAND BINDING DOMAIN IN COMPLEX WITH BIMAGRUMAB FV
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Activin receptor type-2A, ...
Authors:	Scheufler, C.
Deposit date:	2017-03-21
Release date:	2017-11-15
Last modified:	2024-01-17
Method:	X-RAY DIFFRACTION (2.35 Å)
Cite:	Blockade of activin type II receptors with a dual anti-ActRIIA/IIB antibody is critical to promote maximal skeletal muscle hypertrophy. Proc. Natl. Acad. Sci. U.S.A., 114, 2017

5NNI

Dimer structure of Sortilin ectodomain crystal form 2, 3.2 Angstrom
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Sortilin, ...
Authors:	Leloup, N.O.L, Janssen, B.J.C.
Deposit date:	2017-04-09
Release date:	2017-11-29
Last modified:	2024-01-17
Method:	X-RAY DIFFRACTION (3.21 Å)
Cite:	Low pH-induced conformational change and dimerization of sortilin triggers endocytosed ligand release. Nat Commun, 8, 2017

5NHR

CRYSTAL STRUCTURE OF THE Activin receptor type-2B LIGAND BINDING DOMAIN IN COMPLEX WITH BIMAGRUMAB FV, CUBIC CRYSTAL FORM
Descriptor:	Activin receptor type-2B, Bimagrumab Fv Light-Chain, Bimagrumab Fv heavy-chain
Authors:	Rondeau, J.-M.
Deposit date:	2017-03-22
Release date:	2017-11-15
Last modified:	2024-01-17
Method:	X-RAY DIFFRACTION (3.35 Å)
Cite:	Blockade of activin type II receptors with a dual anti-ActRIIA/IIB antibody is critical to promote maximal skeletal muscle hypertrophy. Proc. Natl. Acad. Sci. U.S.A., 114, 2017

5NGV

CRYSTAL STRUCTURE OF THE Activin receptor type-2B LIGAND BINDING DOMAIN IN COMPLEX WITH BIMAGRUMAB FV, ORTHORHOMBIC CRYSTAL FORM
Descriptor:	Activin receptor type-2B, TETRAETHYLENE GLYCOL, anti-human ActRIIB mAb BYM338 heavy-chain, ...
Authors:	Rondeau, J.-M, Lehmann, S.
Deposit date:	2017-03-20
Release date:	2017-11-15
Last modified:	2024-01-17
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Blockade of activin type II receptors with a dual anti-ActRIIA/IIB antibody is critical to promote maximal skeletal muscle hypertrophy. Proc. Natl. Acad. Sci. U.S.A., 114, 2017

1QL8

FACTOR XA SPECIFIC INHIBITOR IN COMPLEX WITH BOVINE TRYPSIN
Descriptor:	CALCIUM ION, SULFATE ION, TRYPSIN, ...
Authors:	Stubbs, M.T.
Deposit date:	1999-08-24
Release date:	2000-08-25
Last modified:	2017-07-05
Method:	X-RAY DIFFRACTION (3 Å)
Cite:	Ph-Dependent Binding Modes Observed in Trypsin Crystals: Lessons for the Structure-Based Drug Design Chembiochem, 3, 2002

1AJD

THREE-DIMENSIONAL STRUCTURE OF THE D153G MUTANT OF E. COLI ALKALINE PHOSPHATASE: A MUTANT WITH WEAKER MAGNESIUM BINDING AND INCREASED CATALYTIC ACTIVITY
Descriptor:	ALKALINE PHOSPHATASE INTERMEDIATE II OF HOLO ENZYME, MAGNESIUM ION, ZINC ION
Authors:	Dealwis, C.G, Chen, L, Abad-Zapatero, C.
Deposit date:	1995-08-18
Release date:	1995-11-14
Last modified:	2021-11-03
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Crystallographic analysis of reversible metal binding observed in a mutant (Asp153-->Gly) of Escherichia coli alkaline phosphatase. Biochemistry, 34, 1995

1AJC

THREE-DIMENSIONAL STRUCTURE OF THE D153G MUTANT OF E. COLI ALKALINE PHOSPHATASE: A MUTANT WITH WEAKER MAGNESIUM BINDING AND INCREASED CATALYTIC ACTIVITY
Descriptor:	ALKALINE PHOSPHATASE, MAGNESIUM ION, ZINC ION
Authors:	Dealwis, C.G, Chen, L, Abad-Zapatero, C.
Deposit date:	1995-07-18
Release date:	1995-11-14
Last modified:	2021-11-03
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Crystallographic analysis of reversible metal binding observed in a mutant (Asp153-->Gly) of Escherichia coli alkaline phosphatase. Biochemistry, 34, 1995

1AJB

THREE-DIMENSIONAL STRUCTURE OF THE D153G MUTANT OF E. COLI ALKALINE PHOSPHATASE: A MUTANT WITH WEAKER MAGNESIUM BINDING AND INCREASED CATALYTIC ACTIVITY
Descriptor:	ALKALINE PHOSPHATASE, MAGNESIUM ION, SULFATE ION, ...
Authors:	Dealwis, C.G, Chen, L, Abad-Zapatero, C.
Deposit date:	1995-08-19
Release date:	1995-11-14
Last modified:	2021-11-03
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	3-D structure of the D153G mutant of Escherichia coli alkaline phosphatase: an enzyme with weaker magnesium binding and increased catalytic activity. Protein Eng., 8, 1995

1AJA

THREE-DIMENSIONAL STRUCTURE OF THE D153G MUTANT OF E. COLI ALKALINE PHOSPHATASE: A MUTANT WITH WEAKER MAGNESIUM BINDING AND INCREASED CATALYTIC ACTIVITY
Descriptor:	ALKALINE PHOSPHATASE
Authors:	Dealwis, C.G, Chen, L, Abad-Zapatero, C.
Deposit date:	1995-08-19
Release date:	1995-11-14
Last modified:	2021-11-03
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Crystallographic analysis of reversible metal binding observed in a mutant (Asp153-->Gly) of Escherichia coli alkaline phosphatase. Biochemistry, 34, 1995

2FP7

West Nile Virus NS2B/NS3protease in complex with Bz-Nle-Lys-Arg-Arg-H
Descriptor:	Genome polyprotein, N-benzoyl-L-norleucyl-L-lysyl-N-[(2S)-5-carbamimidamido-1-hydroxypentan-2-yl]-L-argininamide
Authors:	Schiering, N, D'Arcy, A, Erbel, P.
Deposit date:	2006-01-16
Release date:	2006-03-07
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (1.68 Å)
Cite:	Structural basis for the activation of flaviviral NS3 proteases from dengue and West Nile virus. Nat.Struct.Mol.Biol., 13, 2006

5TEG

Crystal structure of hSETD8 in complex with histone H4K20 norleucine mutant peptide and S-Adenosylmethionine
Descriptor:	Histone H4 mutant peptide with H4K20norleucine, N-lysine methyltransferase KMT5A, S-ADENOSYLMETHIONINE
Authors:	Judge, R.A, Petros, A.M.
Deposit date:	2016-09-21
Release date:	2016-12-07
Last modified:	2023-11-15
Method:	X-RAY DIFFRACTION (1.3 Å)
Cite:	Turning a Substrate Peptide into a Potent Inhibitor for the Histone Methyltransferase SETD8. ACS Med Chem Lett, 7, 2016

1J15

BENZAMIDINE IN COMPLEX WITH RAT TRYPSIN MUTANT X99/175/190RT
Descriptor:	BENZAMIDINE, CALCIUM ION, SULFATE ION, ...
Authors:	Stubbs, M.T.
Deposit date:	2002-11-30
Release date:	2002-12-23
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Reconstructing the Binding Site of Factor Xa in Trypsin Reveals Ligand-induced Structural Plasticity J.MOL.BIOL., 325, 2003

1V2V

Benzamidine in complex with bovine trypsin variant X(SSAI)bT.C1
Descriptor:	BENZAMIDINE, CALCIUM ION, SULFATE ION, ...
Authors:	Rauh, D, Klebe, G, Stubbs, M.T.
Deposit date:	2003-10-17
Release date:	2004-06-01
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Understanding protein-ligand interactions: the price of protein flexibility J.Mol.Biol., 335, 2004

1J16

BENZAMIDINE IN COMPLEX WITH RAT TRYPSIN MUTANT X99/175/190RT
Descriptor:	BENZAMIDINE, CALCIUM ION, SULFATE ION, ...
Authors:	Stubbs, M.T.
Deposit date:	2002-11-30
Release date:	2002-12-23
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Reconstructing the Binding Site of Factor Xa in Trypsin Reveals Ligand-induced Structural Plasticity J.MOL.BIOL., 325, 2003

1V2K

Factor XA specific Inhibitor in complex with bovine trypsin variant X(triple.Glu)bT.D2
Descriptor:	CALCIUM ION, SULFATE ION, Trypsin, ...
Authors:	Rauh, D, Klebe, G, Stubbs, M.T.
Deposit date:	2003-10-17
Release date:	2004-06-01
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Understanding protein-ligand interactions: the price of protein flexibility J.Mol.Biol., 335, 2004

1V2T

Trypsin inhibitor in complex with bovine trypsin variant X(SSFI.Glu)bT.B4
Descriptor:	CALCIUM ION, METHYL N-[(4-METHYLPHENYL)SULFONYL]GLYCYL-3-[AMINO(IMINO)METHYL]-D-PHENYLALANINATE, SULFATE ION, ...
Authors:	Rauh, D, Klebe, G, Stubbs, M.T.
Deposit date:	2003-10-17
Release date:	2004-06-01
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Understanding protein-ligand interactions: the price of protein flexibility J.Mol.Biol., 335, 2004

1V2Q

Trypsin inhibitor in complex with bovine trypsin variant X(SSWI)bT.B4
Descriptor:	CALCIUM ION, METHYL N-[(4-METHYLPHENYL)SULFONYL]GLYCYL-3-[AMINO(IMINO)METHYL]-D-PHENYLALANINATE, SULFATE ION, ...
Authors:	Rauh, D, Klebe, G, Stubbs, M.T.
Deposit date:	2003-10-17
Release date:	2004-06-01
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Understanding protein-ligand interactions: the price of protein flexibility J.Mol.Biol., 335, 2004

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