Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1ISN
DownloadVisualize
BU of 1isn by Molmil
Crystal structure of merlin FERM domain
Descriptor: merlin
Authors:Shimizu, T, Seto, A, Maita, N, Hamada, K, Tsukita, S, Tsukita, S, Hakoshima, T.
Deposit date:2001-12-13
Release date:2002-04-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for neurofibromatosis type 2. Crystal structure of the merlin FERM domain.
J.Biol.Chem., 277, 2002
3W91
DownloadVisualize
BU of 3w91 by Molmil
crystal structure of SeMet-labeled yeast N-acetyltransferase Mpr1 L87M mutant
Descriptor: MPR1 protein
Authors:Nasuno, R, Hirano, Y, Itoh, T, Hakoshima, T, Hibi, T, Takagi, H.
Deposit date:2013-03-23
Release date:2013-07-17
Last modified:2013-08-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional analysis of the yeast N-acetyltransferase Mpr1 involved in oxidative stress tolerance via proline metabolism
Proc.Natl.Acad.Sci.USA, 110, 2013
5YJ0
DownloadVisualize
BU of 5yj0 by Molmil
Mouse Cereblon thalidomide binding domain complexed with S-form thalidomide
Descriptor: Protein cereblon, S-Thalidomide, SULFATE ION, ...
Authors:Mori, T, Hakoshima, T.
Deposit date:2017-10-06
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of thalidomide enantiomer binding to cereblon
Sci Rep, 8, 2018
5YIZ
DownloadVisualize
BU of 5yiz by Molmil
Mouse Cereblon thalidomide binding domain complexed with racemic thalidomide
Descriptor: Protein cereblon, S-Thalidomide, SULFATE ION, ...
Authors:Mori, T, Hakoshima, T.
Deposit date:2017-10-06
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of thalidomide enantiomer binding to cereblon
Sci Rep, 8, 2018
5YJ1
DownloadVisualize
BU of 5yj1 by Molmil
Mouse Cereblon thalidomide binding domain complexed with R-form thalidomide
Descriptor: 2-[(3~{R})-2,6-bis(oxidanylidene)piperidin-3-yl]isoindole-1,3-dione, Protein cereblon, SULFATE ION, ...
Authors:Mori, T, Hakoshima, T.
Deposit date:2017-10-06
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of thalidomide enantiomer binding to cereblon
Sci Rep, 8, 2018
4ZKF
DownloadVisualize
BU of 4zkf by Molmil
Crystal structure of human phosphodiesterase 12
Descriptor: 2',5'-phosphodiesterase 12, MAGNESIUM ION
Authors:Kim, S.Y, Kohno, T, Mori, T, Kitano, K, Hakoshima, T.
Deposit date:2015-04-30
Release date:2015-06-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of human phosphodiesterase
To Be Published
3W05
DownloadVisualize
BU of 3w05 by Molmil
Crystal structure of Oryza sativa DWARF14 (D14) in complex with PMSF
Descriptor: 1,2-ETHANEDIOL, Dwarf 88 esterase, phenylmethanesulfonic acid
Authors:Kagiyama, M, Hirano, Y, Mori, T, Kim, S.Y, Kyozuka, J, Seto, Y, Yamaguchi, S, Hakoshima, T.
Deposit date:2012-10-19
Release date:2013-01-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structures of D14 and D14L in the strigolactone and karrikin signaling pathways
Genes Cells, 18, 2013
1DPF
DownloadVisualize
BU of 1dpf by Molmil
CRYSTAL STRUCTURE OF A MG-FREE FORM OF RHOA COMPLEXED WITH GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, RHOA
Authors:Shimizu, T, Ihara, K, Maesaki, R, Kuroda, S, Kaibuchi, K, Hakoshima, T.
Deposit date:1999-12-27
Release date:2000-06-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:An open conformation of switch I revealed by the crystal structure of a Mg2+-free form of RHOA complexed with GDP. Implications for the GDP/GTP exchange mechanism.
J.Biol.Chem., 275, 2000
3W04
DownloadVisualize
BU of 3w04 by Molmil
Crystal structure of Oryza sativa DWARF14 (D14)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Kagiyama, M, Hirano, Y, Mori, T, Kim, S.Y, Kyozuka, J, Seto, Y, Yamaguchi, S, Hakoshima, T.
Deposit date:2012-10-19
Release date:2013-01-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structures of D14 and D14L in the strigolactone and karrikin signaling pathways
Genes Cells, 18, 2013
3W06
DownloadVisualize
BU of 3w06 by Molmil
Crystal structure of Arabidopsis thaliana DWARF14 Like (AtD14L)
Descriptor: 1,2-ETHANEDIOL, Hydrolase, alpha/beta fold family protein
Authors:Kagiyama, M, Hirano, Y, Mori, T, Kim, S.Y, Kyozuka, J, Seto, Y, Yamaguchi, S, Hakoshima, T.
Deposit date:2012-10-19
Release date:2013-01-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structures of D14 and D14L in the strigolactone and karrikin signaling pathways
Genes Cells, 18, 2013
3WA0
DownloadVisualize
BU of 3wa0 by Molmil
Crystal structure of merlin complexed with DCAF1/VprBP
Descriptor: Merlin, Protein VPRBP
Authors:Mori, T, Gotoh, S, Shirakawa, M, Hakoshima, T.
Deposit date:2013-04-20
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural basis of DDB1-and-Cullin 4-associated Factor 1 (DCAF1) recognition by merlin/NF2 and its implication in tumorigenesis by CD44-mediated inhibition of merlin suppression of DCAF1 function.
Genes Cells, 19, 2014
2H9V
DownloadVisualize
BU of 2h9v by Molmil
Structural basis for induced-fit binding of Rho-kinase to the inhibitor Y27632
Descriptor: (R)-TRANS-4-(1-AMINOETHYL)-N-(4-PYRIDYL) CYCLOHEXANECARBOXAMIDE, Rho-associated protein kinase 2
Authors:Yamaguchi, H, Miwa, Y, Kasa, M, Kitano, K, Amano, M, Kaibuchi, K, Hakoshima, T.
Deposit date:2006-06-12
Release date:2006-12-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for induced-fit binding of Rho-kinase to the inhibitor Y-27632
J.Biochem.(Tokyo), 140, 2006
2F2U
DownloadVisualize
BU of 2f2u by Molmil
crystal structure of the Rho-kinase kinase domain
Descriptor: 5-(1,4-DIAZEPAN-1-SULFONYL)ISOQUINOLINE, Rho-associated protein kinase 2
Authors:Yamaguchi, H, Hakoshima, T.
Deposit date:2005-11-18
Release date:2006-04-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular mechanism for the regulation of rho-kinase by dimerization and its inhibition by fasudil
Structure, 14, 2006
1UIX
DownloadVisualize
BU of 1uix by Molmil
Coiled-coil structure of the RhoA-binding domain in Rho-kinase
Descriptor: Rho-associated kinase
Authors:Shimizu, T, Ihara, K, Maesaki, R, Amano, M, Kaibuchi, K, Hakoshima, T.
Deposit date:2003-07-23
Release date:2003-10-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Parallel coiled-coil association of the RhoA-binding domain in Rho-kinase
J.Biol.Chem., 278, 2003
5B3H
DownloadVisualize
BU of 5b3h by Molmil
The crystal structure of the JACKDAW/IDD10 bound to the heterodimeric SHR-SCR complex
Descriptor: Protein SCARECROW, Protein SHORT-ROOT, ZINC ION, ...
Authors:Hirano, Y, Suyama, T, Nakagawa, M, Hakoshima, T.
Deposit date:2016-02-29
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD
Nat Plants, 3, 2017
5B5V
DownloadVisualize
BU of 5b5v by Molmil
Structure of full-length MOB1b
Descriptor: CHLORIDE ION, MOB kinase activator 1B, ZINC ION
Authors:KIM, S.-Y, Tachioka, Y, Mori, T, Hakoshima, T.
Deposit date:2016-05-24
Release date:2016-07-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.193 Å)
Cite:Structural basis for autoinhibition and its relief of MOB1 in the Hippo pathway
Sci Rep, 6, 2016
5B5W
DownloadVisualize
BU of 5b5w by Molmil
Crystal structure of MOB1-LATS1 NTR domain complex
Descriptor: MOB kinase activator 1B, Serine/threonine-protein kinase LATS1, ZINC ION
Authors:KIM, S.-Y, Tachioka, Y, Mori, T, Hakoshima, T.
Deposit date:2016-05-24
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.957 Å)
Cite:Structural basis for autoinhibition and its relief of MOB1 in the Hippo pathway
Sci Rep, 6, 2016
5B6B
DownloadVisualize
BU of 5b6b by Molmil
Complex of LATS1 and phosphomimetic MOB1b
Descriptor: CHLORIDE ION, MOB kinase activator 1B, Serine/threonine-protein kinase LATS1, ...
Authors:KIM, S.-Y, Tachioka, Y, Mori, T, Hakoshima, T.
Deposit date:2016-05-26
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.536 Å)
Cite:Structural basis for autoinhibition and its relief of MOB1 in the Hippo pathway
Sci Rep, 6, 2016
5B3G
DownloadVisualize
BU of 5b3g by Molmil
The crystal structure of the heterodimer of SHORT-ROOT and SCARECROW GRAS domains
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
Authors:Hirano, Y, Nakagawa, M, Hakoshima, T.
Deposit date:2016-02-29
Release date:2017-03-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD
Nat Plants, 3, 2017
1IS7
DownloadVisualize
BU of 1is7 by Molmil
Crystal structure of rat GTPCHI/GFRP stimulatory complex
Descriptor: GTP Cyclohydrolase I, GTP Cyclohydrolase I Feedback Regulatory Protein, PHENYLALANINE, ...
Authors:Maita, N, Okada, K, Hatakeyama, K, Hakoshima, T.
Deposit date:2001-11-18
Release date:2002-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the stimulatory complex of GTP cyclohydrolase I and its feedback regulatory protein GFRP.
Proc.Natl.Acad.Sci.USA, 99, 2002
7DCH
DownloadVisualize
BU of 7dch by Molmil
Alpha-glucosidase from Weissella cibaria BBK-1 bound with acarbose
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-glycosidase, ...
Authors:Krusong, K, Wangpaiboon, K, Kim, S, Mori, T, Hakoshima, T.
Deposit date:2020-10-26
Release date:2021-08-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.692 Å)
Cite:A GH13 alpha-glucosidase from Weissella cibaria uncommonly acts on short-chain maltooligosaccharides.
Acta Crystallogr D Struct Biol, 77, 2021
7D9C
DownloadVisualize
BU of 7d9c by Molmil
Alpha-glucosidase from Weissella cibaria BBK-1 bound with maltose
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Alpha-glycosidase, CALCIUM ION, ...
Authors:Krusong, K, Wangpaiboon, K, Kim, S, Mori, T, Hakoshima, T.
Deposit date:2020-10-13
Release date:2021-08-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:A GH13 alpha-glucosidase from Weissella cibaria uncommonly acts on short-chain maltooligosaccharides.
Acta Crystallogr D Struct Biol, 77, 2021
7D9B
DownloadVisualize
BU of 7d9b by Molmil
Crystal structure of alpha-glucosidase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Alpha-glycosidase, CALCIUM ION, ...
Authors:Krusong, K, Wangpaiboon, K, Kim, S, Mori, T, Hakoshima, T.
Deposit date:2020-10-12
Release date:2021-08-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:A GH13 alpha-glucosidase from Weissella cibaria uncommonly acts on short-chain maltooligosaccharides.
Acta Crystallogr D Struct Biol, 77, 2021
7DCG
DownloadVisualize
BU of 7dcg by Molmil
Alpha-glucosidase from Weissella cibaria BBK-1 bound with maltotriose
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Alpha-glycosidase, CALCIUM ION, ...
Authors:Krusong, K, Wangpaiboon, K, Kim, S, Mori, T, Hakoshima, T.
Deposit date:2020-10-26
Release date:2021-08-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:A GH13 alpha-glucosidase from Weissella cibaria uncommonly acts on short-chain maltooligosaccharides.
Acta Crystallogr D Struct Biol, 77, 2021
7EHI
DownloadVisualize
BU of 7ehi by Molmil
Crystal structure of covalent maltosyl-alpha-glucosidase intermediate
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Krusong, K, Wangpaiboon, K, Kim, S, Mori, T, Hakoshima, T.
Deposit date:2021-03-29
Release date:2021-08-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:A GH13 alpha-glucosidase from Weissella cibaria uncommonly acts on short-chain maltooligosaccharides.
Acta Crystallogr D Struct Biol, 77, 2021

225158

數據於2024-09-18公開中

PDB statisticsPDBj update infoContact PDBjnumon