Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8KFR
DownloadVisualize
BU of 8kfr by Molmil
Crystal structure of ZmMOC1/nicked Holliday junction/Ca2+ complex
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DNA (25-MER), ...
Authors:Zhang, D, Luo, Z, Lin, Z.
Deposit date:2023-08-16
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:MOC1 cleaves Holliday junctions through a cooperative nick and counter-nick mechanism mediated by metal ions.
Nat Commun, 15, 2024
3GEQ
DownloadVisualize
BU of 3geq by Molmil
Structural basis for the chemical rescue of Src kinase activity
Descriptor: 1-TERT-BUTYL-3-(4-CHLORO-PHENYL)-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE, Proto-oncogene tyrosine-protein kinase Src
Authors:Muratore, K.E, Seeliger, M.A, Wang, Z, Fomina, D, Neiswinger, J, Havranek, J.J, Baker, D, Kuriyan, J, Cole, P.A.
Deposit date:2009-02-25
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Comparative analysis of mutant tyrosine kinase chemical rescue.
Biochemistry, 48, 2009
8OG1
DownloadVisualize
BU of 8og1 by Molmil
Exostosin-like 3 apo enzyme
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Exostosin-like 3, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Sammon, D, Hohenester, E.
Deposit date:2023-03-17
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Molecular mechanism of decision-making in glycosaminoglycan biosynthesis.
Nat Commun, 14, 2023
8OG4
DownloadVisualize
BU of 8og4 by Molmil
Exostosin-like 3 UDP complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Exostosin-like 3, MANGANESE (II) ION, ...
Authors:Sammon, D, Hohenester, E.
Deposit date:2023-03-18
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular mechanism of decision-making in glycosaminoglycan biosynthesis.
Nat Commun, 14, 2023
1ROF
DownloadVisualize
BU of 1rof by Molmil
NMR STUDY OF 4FE-4S FERREDOXIN OF THERMATOGA MARITIMA
Descriptor: FERREDOXIN, IRON/SULFUR CLUSTER
Authors:Roesch, P, Sticht, H, Wildegger, G, Bentrop, D, Darimont, B, Sterner, R.
Deposit date:1995-11-24
Release date:1996-06-10
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:An NMR-derived model for the solution structure of oxidized Thermotoga maritima 1[Fe4-S4] ferredoxin.
Eur.J.Biochem., 237, 1996
3G8I
DownloadVisualize
BU of 3g8i by Molmil
Aleglitazar, a new, potent, and balanced PPAR alpha/gamma agonist for the treatment of type II diabetes
Descriptor: (2S)-2-methoxy-3-{4-[2-(5-methyl-2-phenyl-1,3-oxazol-4-yl)ethoxy]-1-benzothiophen-7-yl}propanoic acid, Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor alpha
Authors:Benz, J, Bernardeau, A, Binggeli, A, Blum, D, Boehringer, M, Grether, U, Hilpert, H, Kuhn, B, Maerki, H.P, Meyer, M, Puentener, K, Raab, S, Ruf, A, Schlatter, D, Gsell, B, Stihle, M, Mohr, P.
Deposit date:2009-02-12
Release date:2009-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Aleglitazar, a new, potent, and balanced dual PPARalpha/gamma agonist for the treatment of type II diabetes.
Bioorg.Med.Chem.Lett., 19, 2009
1M5Q
DownloadVisualize
BU of 1m5q by Molmil
Crystal structure of a novel Sm-like archaeal protein from Pyrobaculum aerophilum
Descriptor: ACETIC ACID, CADMIUM ION, GLYCEROL, ...
Authors:Mura, C, Phillips, M, Kozhukhovsky, A, Eisenberg, D.
Deposit date:2002-07-09
Release date:2003-03-18
Last modified:2017-05-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and assembly of an augmented Sm-like archaeal protein 14-mer
Proc.Natl.Acad.Sci.USA, 100, 2003
5HIU
DownloadVisualize
BU of 5hiu by Molmil
Structure of the TSC2 N-terminus
Descriptor: GTPase activator-like protein
Authors:Zech, R, Kiontke, S, Kummel, D.
Deposit date:2016-01-12
Release date:2016-08-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Tuberous Sclerosis Complex 2 (TSC2) N Terminus Provides Insight into Complex Assembly and Tuberous Sclerosis Pathogenesis.
J.Biol.Chem., 291, 2016
8JT5
DownloadVisualize
BU of 8jt5 by Molmil
VMAT2 complex with histamine
Descriptor: HISTAMINE, Synaptic vesicular amine transporter
Authors:Jiang, D.H, Wu, D.
Deposit date:2023-06-21
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:VMAT2 complex with histamine
To Be Published
8JSX
DownloadVisualize
BU of 8jsx by Molmil
VMAT2 complex with noradrenaline in lumen-facing state
Descriptor: Noradrenaline, Synaptic vesicular amine transporter
Authors:Jiang, D.H, Wu, D.
Deposit date:2023-06-20
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:VMAT2 complex with noradrenaline in lumen-facing state
To Be Published
8JTB
DownloadVisualize
BU of 8jtb by Molmil
VMAT2 complex with dopamine
Descriptor: L-DOPAMINE, Synaptic vesicular amine transporter
Authors:Jiang, D.H, Wu, D.
Deposit date:2023-06-21
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:VMAT2 complex with dopamine
To Be Published
7BYI
DownloadVisualize
BU of 7byi by Molmil
Structure of SHMT2 in complex with CBX
Descriptor: CARBENOXOLONE, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
Authors:Li, L, Chen, Y, Lu, D, Zhang, C, Su, D.
Deposit date:2020-04-23
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structure of SHMT2 with CBX
To Be Published
3GGP
DownloadVisualize
BU of 3ggp by Molmil
Crystal structure of prephenate dehydrogenase from A. aeolicus in complex with hydroxyphenyl propionate and NAD+
Descriptor: CHLORIDE ION, HYDROXYPHENYL PROPIONIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Sun, W, Shahinas, D, Kimber, M.S, Christendat, D.
Deposit date:2009-03-01
Release date:2009-03-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Crystal Structure of Aquifex aeolicus Prephenate Dehydrogenase Reveals the Mode of Tyrosine Inhibition.
J.Biol.Chem., 284, 2009
8JQU
DownloadVisualize
BU of 8jqu by Molmil
Crystal structure of GppNHp bound GTPase domain of Rab5a from Leishmania donovani
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Pandey, D, Zohib, M, Pal, R.K, Biswal, B.K, Arora, A.
Deposit date:2023-06-14
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Crystal structure of GppNHp bound GTPase domain of Rab5a from Leishmania donovani
To Be Published
3G9E
DownloadVisualize
BU of 3g9e by Molmil
Aleglitaar. a new. potent, and balanced dual ppara/g agonist for the treatment of type II diabetes
Descriptor: (2S)-2-methoxy-3-{4-[2-(5-methyl-2-phenyl-1,3-oxazol-4-yl)ethoxy]-1-benzothiophen-7-yl}propanoic acid, Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma
Authors:Ruf, A, Benz, J, Bernardeau, A, Binggeli, A, Blum, D, Boehringer, M, Grether, U, Hilpert, H, Kuhn, B, Maerki, H.P, Meyer, M, Puenterner, K, Raab, S, Schlatter, D, Gsell, B, Stihle, M, Mohr, P.
Deposit date:2009-02-13
Release date:2009-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Aleglitazar, a new, potent, and balanced dual PPARalpha/gamma agonist for the treatment of type II diabetes.
Bioorg.Med.Chem.Lett., 19, 2009
8KFV
DownloadVisualize
BU of 8kfv by Molmil
Crystal structure of ZmMOC1 K229A in complex with a nicked Holliday junction soaked in Mn2+ for 180 seconds
Descriptor: 1,2-ETHANEDIOL, DNA (25-MER), DNA (33-MER), ...
Authors:Zhang, D, Luo, Z, Lin, Z.
Deposit date:2023-08-16
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:MOC1 cleaves Holliday junctions through a cooperative nick and counter-nick mechanism mediated by metal ions.
Nat Commun, 15, 2024
8K88
DownloadVisualize
BU of 8k88 by Molmil
Structure of procaryotic Ago
Descriptor: DNA (41-mer), DNA/RNA (21-mer), MAGNESIUM ION, ...
Authors:Gao, X, Sun, D, Cui, S, Wang, Y.
Deposit date:2023-07-29
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural Basis of prokaryotic Argonaute System
To Be Published
8KFT
DownloadVisualize
BU of 8kft by Molmil
Crystal structure of ZmMOC1 in complex with a nicked Holliday junction soaked in Mn2+ for 15 seconds
Descriptor: DNA (25-MER), DNA (33-MER), DNA (5'-D(P*CP*AP*CP*GP*AP*TP*TP*G)-3'), ...
Authors:Zhang, D, Luo, Z, Lin, Z.
Deposit date:2023-08-16
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:MOC1 cleaves Holliday junctions through a cooperative nick and counter-nick mechanism mediated by metal ions.
Nat Commun, 15, 2024
3GGG
DownloadVisualize
BU of 3ggg by Molmil
The crystal structure of A. aeolicus prephenate dehydrogenase in complex with tyrosine and NAD+
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Prephenate dehydrogenase, TYROSINE
Authors:Sun, W, Shahinas, D, Christendat, D.
Deposit date:2009-02-27
Release date:2009-03-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:The Crystal Structure of Aquifex aeolicus Prephenate Dehydrogenase Reveals the Mode of Tyrosine Inhibition.
J.Biol.Chem., 284, 2009
8KFU
DownloadVisualize
BU of 8kfu by Molmil
Crystal structure of ZmMOC1 in complex with a nicked Holliday junction soaked in Mn2+ for 180 seconds
Descriptor: 1,2-ETHANEDIOL, DNA (25-MER), DNA (33-MER), ...
Authors:Zhang, D, Luo, Z, Lin, Z.
Deposit date:2023-08-16
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:MOC1 cleaves Holliday junctions through a cooperative nick and counter-nick mechanism mediated by metal ions.
Nat Commun, 15, 2024
8K87
DownloadVisualize
BU of 8k87 by Molmil
Dimer structure of procaryotic Ago
Descriptor: DNA (41-mer), MAGNESIUM ION, Piwi domain protein, ...
Authors:Gao, X, Sun, D, Cui, S, Wang, Y.
Deposit date:2023-07-29
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural Basis of prokaryotic Argonaute System
To Be Published
8KFW
DownloadVisualize
BU of 8kfw by Molmil
Crystal structure of ZmMOC1 K229A in complex with a nicked Holliday junction soaked in Mn2+ for 600 seconds
Descriptor: 1,2-ETHANEDIOL, DNA (26-MER), DNA (33-MER), ...
Authors:Zhang, D, Luo, Z, Lin, Z.
Deposit date:2023-08-16
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:MOC1 cleaves Holliday junctions through a cooperative nick and counter-nick mechanism mediated by metal ions.
Nat Commun, 15, 2024
8KFS
DownloadVisualize
BU of 8kfs by Molmil
Crystal structure of ZmMOC1/nicked Holliday junction complex at ground state
Descriptor: DNA (25-MER), DNA (33-MER), DNA (5'-D(P*CP*AP*CP*GP*AP*TP*TP*G)-3'), ...
Authors:Zhang, D, Luo, Z, Lin, Z.
Deposit date:2023-08-16
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:MOC1 cleaves Holliday junctions through a cooperative nick and counter-nick mechanism mediated by metal ions.
Nat Commun, 15, 2024
4DIU
DownloadVisualize
BU of 4diu by Molmil
Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR94
Descriptor: Engineered Protein PF00326
Authors:Seetharaman, J, Lew, S, Wang, D, Kohan, E, Patel, D, Whitehead, T, Fleishman, S, Ciccosanti, C, Xiao, R, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-01-31
Release date:2012-04-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR94
To be Published
8JFC
DownloadVisualize
BU of 8jfc by Molmil
V1/S quadruple mutant Plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS) complexed with compound 6 (B21591), NADPH and dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 4-[3-[[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]methyl]phenyl]benzoic acid, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
Authors:Vanichtanankul, J, Saeyang, T, Vitsupakorn, D, Saepua, S, Thongpanchang, C, Yuthavong, Y, Kamchonwongpaisan, S, Hoarau, M.
Deposit date:2023-05-17
Release date:2023-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of rigid biphenyl Plasmodium falciparum DHFR inhibitors using a fragment linking strategy.
Rsc Med Chem, 14, 2023

223790

數據於2024-08-14公開中

PDB statisticsPDBj update infoContact PDBjnumon