Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7CRB
DownloadVisualize
BU of 7crb by Molmil
Cryo-EM structure of plant NLR RPP1 LRR-ID domain in complex with ATR1
Descriptor: Avirulence protein ATR1, NAD+ hydrolase (NADase)
Authors:Ma, S.C, Lapin, D, Liu, L, Sun, Y, Song, W, Zhang, X.X, Logemann, E, Yu, D.L, Wang, J, Jirschitzka, J, Han, Z.F, SchulzeLefert, P, Parker, J.E, Chai, J.J.
Deposit date:2020-08-13
Release date:2020-12-16
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Direct pathogen-induced assembly of an NLR immune receptor complex to form a holoenzyme.
Science, 370, 2020
6P8K
DownloadVisualize
BU of 6p8k by Molmil
Escherichia coli Bacterioferritin Substituted with Zinc Protoporphyrin IX
Descriptor: Bacterioferritin, MALONATE ION, PROTOPORPHYRIN IX CONTAINING ZN, ...
Authors:Taylor, A.B, Cioloboc, D, Kurtz, D.M.
Deposit date:2019-06-07
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a Zinc Porphyrin-Substituted Bacterioferritin and Photophysical Properties of Iron Reduction.
Biochemistry, 59, 2020
2X8G
DownloadVisualize
BU of 2x8g by Molmil
Oxidized thioredoxin glutathione reductase from Schistosoma mansoni
Descriptor: DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Angelucci, F, Dimastrogiovanni, D, Boumis, G, Brunori, M, Miele, A.E, Saccoccia, F, Bellelli, A.
Deposit date:2010-03-09
Release date:2010-07-21
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mapping the Catalytic Cycle of Schistosoma Mansoni Thioredoxin Glutathione Reductase by X-Ray Crystallography
J.Biol.Chem., 285, 2010
3ZIM
DownloadVisualize
BU of 3zim by Molmil
Discovery of a potent and isoform-selective targeted covalent inhibitor of the lipid kinase PI3Kalpha
Descriptor: 1-[4-[[2-(1H-indazol-4-yl)-4-morpholin-4-yl-thieno[3,2-d]pyrimidin-6-yl]methyl]piperazin-1-yl]-6-methyl-hept-5-ene-1,4- dione, PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT ALPHA ISOFORM
Authors:Nacht, M, Qiao, L, Sheets, M.P, Martin, T.S, Labenski, M, Mazdiyasni, H, Karp, R, Zhu, Z, Chaturvedi, P, Bhavsar, D, Niu, D, Westlin, W, Petter, R.C, Medikonda, A.P, Jestel, A, Blaesse, M, Singh, J.
Deposit date:2013-01-09
Release date:2013-02-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Discovery of a Potent and Isoform-Selective Targeted Covalent Inhibitor of the Lipid Kinase Pi3Kalpha
J.Med.Chem., 56, 2013
7CR1
DownloadVisualize
BU of 7cr1 by Molmil
human KCNQ2 in complex with ztz240
Descriptor: N-(6-chloranylpyridin-3-yl)-4-fluoranyl-benzamide, Potassium voltage-gated channel subfamily KQT member 2
Authors:Li, X, Lv, D, Wang, J, Ye, S, Guo, J.
Deposit date:2020-08-12
Release date:2020-09-16
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular basis for ligand activation of the human KCNQ2 channel.
Cell Res., 31, 2021
3ZNV
DownloadVisualize
BU of 3znv by Molmil
Crystal structure of the OTU domain of OTULIN at 1.3 Angstroms.
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Keusekotten, K, Elliott, P.R, Glockner, L, Kulathu, Y, Wauer, T, Krappmann, D, Hofmann, K, Komander, D.
Deposit date:2013-02-18
Release date:2013-06-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Otulin Antagonizes Lubac Signaling by Specifically Hydrolyzing met1-Linked Polyubiquitin.
Cell(Cambridge,Mass.), 153, 2013
6FWZ
DownloadVisualize
BU of 6fwz by Molmil
Crystal structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) (V264G mutant) in complex with UDP-GlcNAc
Descriptor: (2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE, MAGNESIUM ION, UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, ...
Authors:Pike, A.C.W, Dong, Y.Y, Chu, A, Tessitore, A, Goubin, S, Dong, L, Mukhopadhyay, S, Mahajan, P, Chalk, R, Berridge, G, Wang, D, Kupinska, K, Belaya, K, Beeson, D, Burgess-Brown, N, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2018-03-07
Release date:2018-07-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of DPAGT1 Explain Glycosylation Disease Mechanisms and Advance TB Antibiotic Design.
Cell, 175, 2018
8PUF
DownloadVisualize
BU of 8puf by Molmil
Structure of immature HTLV-1 CA-NTD from in vitro assembled MA126-CANC tubes: axis angle 20 degrees
Descriptor: Gag protein (Fragment)
Authors:Obr, M, Percipalle, M, Chernikova, D, Yang, H, Thader, A, Pinke, G, Porley, D, Mansky, L.M, Dick, R.A, Schur, F.K.M.
Deposit date:2023-07-17
Release date:2023-08-23
Last modified:2025-02-26
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Distinct stabilization of the human T cell leukemia virus type 1 immature Gag lattice.
Nat.Struct.Mol.Biol., 32, 2025
8PUG
DownloadVisualize
BU of 8pug by Molmil
Structure of the immature HTLV-1 CA lattice from full-length Gag VLPs: CA-NTD refinement
Descriptor: Gag polyprotein
Authors:Obr, M, Percipalle, M, Chernikova, D, Yang, H, Thader, A, Pinke, G, Porley, D, Mansky, L.M, Dick, R.A, Schur, F.K.M.
Deposit date:2023-07-17
Release date:2023-08-23
Last modified:2025-02-26
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Distinct stabilization of the human T cell leukemia virus type 1 immature Gag lattice.
Nat.Struct.Mol.Biol., 32, 2025
8PU6
DownloadVisualize
BU of 8pu6 by Molmil
Structure of immature HTLV-1 CA-NTD from in vitro assembled MA126-CANC tubes: pooled class
Descriptor: Gag protein (Fragment)
Authors:Obr, M, Percipalle, M, Chernikova, D, Yang, H, Thader, A, Pinke, G, Porley, D, Mansky, L.M, Dick, R.A, Schur, F.K.M.
Deposit date:2023-07-17
Release date:2023-08-23
Last modified:2025-02-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Distinct stabilization of the human T cell leukemia virus type 1 immature Gag lattice.
Nat.Struct.Mol.Biol., 32, 2025
8PU9
DownloadVisualize
BU of 8pu9 by Molmil
Structure of immature HTLV-1 CA-NTD from in vitro assembled MA126-CANC tubes: axis angle -10 degrees
Descriptor: Gag protein (Fragment)
Authors:Obr, M, Percipalle, M, Chernikova, D, Yang, H, Thader, A, Pinke, G, Porley, D, Mansky, L.M, Dick, R.A, Schur, F.K.M.
Deposit date:2023-07-17
Release date:2023-08-23
Last modified:2025-02-26
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Distinct stabilization of the human T cell leukemia virus type 1 immature Gag lattice.
Nat.Struct.Mol.Biol., 32, 2025
8PUC
DownloadVisualize
BU of 8puc by Molmil
Structure of immature HTLV-1 CA-NTD from in vitro assembled MA126-CANC tubes: axis angle 05 degrees
Descriptor: Gag protein (Fragment)
Authors:Obr, M, Percipalle, M, Chernikova, D, Yang, H, Thader, A, Pinke, G, Porley, D, Mansky, L.M, Dick, R.A, Schur, F.K.M.
Deposit date:2023-07-17
Release date:2023-08-23
Last modified:2025-02-26
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Distinct stabilization of the human T cell leukemia virus type 1 immature Gag lattice.
Nat.Struct.Mol.Biol., 32, 2025
3HRE
DownloadVisualize
BU of 3hre by Molmil
X-ray crystallographic structure of CTX-M-9 S70G
Descriptor: CTX-M-9 extended-spectrum beta-lactamase, PHOSPHATE ION
Authors:Delmas, J, Leyssene, D, Dubois, D, Vazeille, E, Robin, F, Bonnet, R.
Deposit date:2009-06-09
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural insights into substrate recognition and product expulsion in CTX-M enzymes.
J.Mol.Biol., 400, 2010
2X99
DownloadVisualize
BU of 2x99 by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with NADPH
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Angelucci, F, Dimastrogiovanni, D, Boumis, G, Brunori, M, Miele, A.E, Saccoccia, F, Bellelli, A.
Deposit date:2010-03-15
Release date:2010-07-21
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mapping the Catalytic Cycle of Schistosoma Mansoni Thioredoxin Glutathione Reductase by X-Ray Crystallography
J.Biol.Chem., 285, 2010
5OD3
DownloadVisualize
BU of 5od3 by Molmil
Crystal structure of R. ruber ADH-A, mutant Y54G, L119Y
Descriptor: Alcohol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Dobritzsch, D, Maurer, D, Hamnevik, E, Enugala, T.R, Widersten, M.
Deposit date:2017-07-04
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Stereo- and Regioselectivity in Catalyzed Transformation of a 1,2-Disubstituted Vicinal Diol and the Corresponding Diketone by Wild Type and Laboratory Evolved Alcohol Dehydrogenases
Acs Catalysis, 8, 2018
4B3S
DownloadVisualize
BU of 4b3s by Molmil
Crystal structure of the 30S ribosome in complex with compound 37
Descriptor: (1R,2R,3S,4R,6S)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-beta-L-idopyranosyl)-beta-D-ribofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-4-O-benzyl-2-deoxy-alpha-D-glucopyranoside, 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Ng, C.L, Lang, K, Shcherbakov, D, Matt, T, Perez-Fernandez, D, Patak, R, Meyer, M, Duscha, S, Akbergenov, R, Boukari, H, Freihofer, P, Kudyba, I, Reddy, M.S.K, Nandurikar, R.S, Ramakrishnan, V, Vasella, A, Bottger, E.C.
Deposit date:2012-07-26
Release date:2013-08-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:4'-O-Substitutions Determine Selectivity of Aminoglycoside Antibiotics
Nat.Commun., 5, 2014
2AYQ
DownloadVisualize
BU of 2ayq by Molmil
3-ISOPROPYLMALATE DEHYDROGENASE FROM THE MODERATE FACULTATIVE THERMOPHILE, BACILLUS COAGULANS
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE
Authors:Tsuchiya, D, Takenaka, A.
Deposit date:1998-02-20
Release date:1998-05-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of 3-isopropylmalate dehydrogenase from the moderate facultative thermophile, Bacillus coagulans: two strategies for thermostabilization of protein structures.
J.Biochem.(Tokyo), 122, 1997
6RW8
DownloadVisualize
BU of 6rw8 by Molmil
Cryo-EM structure of Xenorhabdus nematophila XptA1
Descriptor: A component of insecticidal toxin complex (Tc)
Authors:Roderer, D, Leidreiter, F, Gatsogiannis, C, Meusch, D, Benz, R, Raunser, S.
Deposit date:2019-06-04
Release date:2019-10-23
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Common architecture of Tc toxins from human and insect pathogenic bacteria.
Sci Adv, 5, 2019
6S0L
DownloadVisualize
BU of 6s0l by Molmil
Structure of the A2A adenosine receptor determined at SwissFEL using native-SAD at 4.57 keV from all available diffraction patterns
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, ...
Authors:Nass, K, Cheng, R, Vera, L, Mozzanica, A, Redford, S, Ozerov, D, Basu, S, James, D, Knopp, G, Cirelli, C, Martiel, I, Casadei, C, Weinert, T, Nogly, P, Skopintsev, P, Usov, I, Leonarski, F, Geng, T, Rappas, M, Dore, A.S, Cooke, R, Nasrollahi Shirazi, S, Dworkowski, F, Sharpe, M, Olieric, N, Steinmetz, M.O, Schertler, G, Abela, R, Patthey, L, Schmitt, B, Hennig, M, Standfuss, J, Wang, M, Milne, J.C.
Deposit date:2019-06-17
Release date:2020-07-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Advances in long-wavelength native phasing at X-ray free-electron lasers.
Iucrj, 7, 2020
1WOG
DownloadVisualize
BU of 1wog by Molmil
Crystal Structure of Agmatinase Reveals Structural Conservation and Inhibition Mechanism of the Ureohydrolase Superfamily
Descriptor: HEXANE-1,6-DIAMINE, MANGANESE (II) ION, agmatinase
Authors:Ahn, H.J, Kim, K.H, Lee, J, Ha, J.-Y, Lee, H.H, Kim, D, Yoon, H.-J, Kwon, A.-R, Suh, S.W.
Deposit date:2004-08-18
Release date:2004-09-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of agmatinase reveals structural conservation and inhibition mechanism of the ureohydrolase superfamily
J.Biol.Chem., 279, 2004
3DLQ
DownloadVisualize
BU of 3dlq by Molmil
Crystal structure of the IL-22/IL-22R1 complex
Descriptor: Interleukin-22, Interleukin-22 receptor subunit alpha-1
Authors:Bleicher, L, de Moura, P.R, Watanabe, L, Colau, D, Dumoutier, L, Renauld, J.-C, Polikarpov, I.
Deposit date:2008-06-28
Release date:2008-08-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the IL-22/IL-22R1 complex and its implications for the IL-22 signaling mechanism
Febs Lett., 582, 2008
6RWA
DownloadVisualize
BU of 6rwa by Molmil
Cryo-EM structure of Photorhabdus luminescens TcdA4
Descriptor: TcdA4
Authors:Roderer, D, Leidreiter, F, Gatsogiannis, C, Meusch, D, Benz, R, Raunser, S.
Deposit date:2019-06-04
Release date:2019-10-23
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Common architecture of Tc toxins from human and insect pathogenic bacteria.
Sci Adv, 5, 2019
4BEV
DownloadVisualize
BU of 4bev by Molmil
ATPase crystal structure with bound phosphate analogue
Descriptor: COPPER EFFLUX ATPASE, MAGNESIUM ION, TRIFLUOROMAGNESATE
Authors:Mattle, D, Drachmann, N.D, Liu, X.Y, Gourdon, P, Pedersen, B.P, Morth, P, Wang, J, Nissen, P.
Deposit date:2013-03-12
Release date:2014-04-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.583 Å)
Cite:ATPase Crystal Structure with Bound Phosphate Analogue
To be Published
7YHN
DownloadVisualize
BU of 7yhn by Molmil
ANTI-TUMOR AGENT Y48 IN COMPLEX WITH TUBULIN
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-methyl-3-[(4-methylphenyl)sulfonylamino]-~{N}-[(6-methylpyridin-3-yl)methyl]benzamide, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Du, T, Ji, M, Hou, Z, Lin, S, Zhang, J, Wu, D, Zhang, K, Lu, D, Xu, H, Chen, X.
Deposit date:2022-07-14
Release date:2023-07-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Optimization of Benzamide Derivatives as Potent and Orally Active Tubulin Inhibitors Targeting the Colchicine Binding Site.
J.Med.Chem., 65, 2022
6FM9
DownloadVisualize
BU of 6fm9 by Molmil
Crystal structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1)
Descriptor: (2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE, UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
Authors:Pike, A.C.W, Dong, Y.Y, Chu, A, Tessitore, A, Goubin, S, Dong, L, Mukhopadhyay, S, Mahajan, P, Chalk, R, Berridge, G, Wang, D, Kupinska, K, Belaya, K, Beeson, D, Burgess-Brown, N, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2018-01-30
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structures of DPAGT1 Explain Glycosylation Disease Mechanisms and Advance TB Antibiotic Design.
Cell, 175, 2018

238582

數據於2025-07-09公開中

PDB statisticsPDBj update infoContact PDBjnumon