Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5GXQ
DownloadVisualize
BU of 5gxq by Molmil
The crystal structure of the nucleosome containing H3.6
Descriptor: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Taguchi, H, Xie, Y, Horikoshi, N, Kurumizaka, H.
Deposit date:2016-09-19
Release date:2017-04-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal Structure and Characterization of Novel Human Histone H3 Variants, H3.6, H3.7, and H3.8
Biochemistry, 56, 2017
6P64
DownloadVisualize
BU of 6p64 by Molmil
Alpha-beta TCR Binding to Neoantigen KQWLVWLFL Presented by HLA-A206
Descriptor: 302TIL TCR alpha chain, 302TIL TCR beta chain, Beta-2-microglobulin, ...
Authors:Devlin, J.R, Baker, B.M.
Deposit date:2019-05-31
Release date:2020-06-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:A T cell receptor peptide/MHC complex at 3.05 Angstrom resolution
To be Published
6G01
DownloadVisualize
BU of 6g01 by Molmil
Complex of neuraminidase from H1N1 influenza virus with tamiphosphor monomethyl ester
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pachl, P, Pokorna, J.
Deposit date:2018-03-15
Release date:2019-01-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:DNA-linked inhibitor antibody assay (DIANA) as a new method for screening influenza neuraminidase inhibitors.
Biochem. J., 475, 2018
6G02
DownloadVisualize
BU of 6g02 by Molmil
Complex of neuraminidase from H1N1 influenza virus with tamiphosphor omega-azidohexyl ester
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-[[(3~{R},4~{R},5~{S})-4-acetamido-5-azanyl-3-pentan-3-yloxy-cyclohexen-1-yl]-oxidanyl-phosphoryl]oxyhexylimino-azanylidene-azanium, ...
Authors:Pachl, P, Pokorna, J.
Deposit date:2018-03-15
Release date:2019-01-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:DNA-linked inhibitor antibody assay (DIANA) as a new method for screening influenza neuraminidase inhibitors.
Biochem. J., 475, 2018
5T8I
DownloadVisualize
BU of 5t8i by Molmil
PI3Kdelta in complex with the inhibitor GS-9901
Descriptor: 2,4-diamino-6-{[(S)-[5-chloro-8-fluoro-4-oxo-3-(pyridin-3-yl)-3,4-dihydroquinazolin-2-yl](cyclopropyl)methyl]amino}pyrimidine-5-carbonitrile, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform
Authors:Somoza, J.R, Villasenor, A.
Deposit date:2016-09-07
Release date:2016-12-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Discovery of GS-9901: A Potent, Selective and Metabolically Stable Inhibitor of PI3Kd
To Be Published
7ZPY
DownloadVisualize
BU of 7zpy by Molmil
Influenza polymerase A C-terminal domain of PA subunit with optimized small peptide inhibitor
Descriptor: METHOXY-ETHOXYL, Peptide inhibitor (ASP-TYR-ASN-PRO-TYR-LEU-LEU-TYR-LEU-LYS), Polymerase acidic protein
Authors:Radilova, K, Brynda, J.
Deposit date:2022-04-29
Release date:2022-10-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Thermodynamic and structural characterization of an optimized peptide-based inhibitor of the influenza polymerase PA-PB1 subunit interaction.
Antiviral Res., 208, 2022
5YO8
DownloadVisualize
BU of 5yo8 by Molmil
Crystal structure of beta-C25/C30/C35-prene synthase
Descriptor: Tetraprenyl-beta-curcumene synthase
Authors:Fujihashi, M, Miki, K.
Deposit date:2017-10-27
Release date:2018-05-09
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure and functional analysis of large-terpene synthases belonging to a newly found subclass.
Chem Sci, 9, 2018
5NWE
DownloadVisualize
BU of 5nwe by Molmil
Complex of H275Y mutant variant of neuraminidase from H1N1 influenza virus with oseltamivir
Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pachl, P, Pokorna, J.
Deposit date:2017-05-05
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Kinetic, Thermodynamic, and Structural Analysis of Drug Resistance Mutations in Neuraminidase from the 2009 Pandemic Influenza Virus.
Viruses, 10, 2018
5NZ4
DownloadVisualize
BU of 5nz4 by Molmil
Complex of I223V mutant variant of neuraminidase from H1N1 influenza virus with oseltamivir
Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pachl, P, Pokorna, J, Karlukova, E.
Deposit date:2017-05-12
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Kinetic, Thermodynamic, and Structural Analysis of Drug Resistance Mutations in Neuraminidase from the 2009 Pandemic Influenza Virus.
Viruses, 10, 2018
5NZF
DownloadVisualize
BU of 5nzf by Molmil
Complex of H275Y/I223V mutant variant of neuraminidase from H1N1 influenza virus with oseltamivir
Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pachl, P, Pokorna, J.
Deposit date:2017-05-14
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Kinetic, Thermodynamic, and Structural Analysis of Drug Resistance Mutations in Neuraminidase from the 2009 Pandemic Influenza Virus.
Viruses, 10, 2018
8R7D
DownloadVisualize
BU of 8r7d by Molmil
Complex of rice blast (Magnaporthe oryzae) mutant effector protein PWL2-SNDE with the HMA domain of OsHIPP43 from rice (Oryza sativa)
Descriptor: Os01g0507700 protein, Pwl2 protein
Authors:Zdrzalek, R, Banfield, M.J.
Deposit date:2023-11-24
Release date:2024-01-31
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Bioengineering a plant NLR immune receptor with a robust binding interface toward a conserved fungal pathogen effector.
Proc.Natl.Acad.Sci.USA, 121, 2024
5NZN
DownloadVisualize
BU of 5nzn by Molmil
Complex of H275Y/S247N mutant variant of neuraminidase from H1N1 influenza virus with oseltamivir
Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pachl, P, Pokorna, J.
Deposit date:2017-05-14
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Kinetic, Thermodynamic, and Structural Analysis of Drug Resistance Mutations in Neuraminidase from the 2009 Pandemic Influenza Virus.
Viruses, 10, 2018
5NZE
DownloadVisualize
BU of 5nze by Molmil
Complex of S247N mutant variant of neuraminidase from H1N1 influenza virus with oseltamivir
Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pachl, P, Pokorna, J, Hejdanek, J.
Deposit date:2017-05-13
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Kinetic, Thermodynamic, and Structural Analysis of Drug Resistance Mutations in Neuraminidase from the 2009 Pandemic Influenza Virus.
Viruses, 10, 2018
8R7A
DownloadVisualize
BU of 8r7a by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein PWL2 with the HMA domain of OsHIPP43 from rice (Oryza sativa)
Descriptor: Os01g0507700 protein, Pwl2 protein
Authors:Zdrzalek, R, Banfield, M.J.
Deposit date:2023-11-24
Release date:2024-01-31
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bioengineering a plant NLR immune receptor with a robust binding interface toward a conserved fungal pathogen effector.
Proc.Natl.Acad.Sci.USA, 121, 2024
7EM6
DownloadVisualize
BU of 7em6 by Molmil
Crystal structure of the PI5P4Kbeta N203D-ITP complex
Descriptor: INOSINE-5'-DIPHOSPHATE, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, [[(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-(6-oxidanylidene-1~{H}-purin-9-yl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Senda, M, Senda, T.
Deposit date:2021-04-13
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The GTP responsiveness of PI5P4K beta evolved from a compromised trade-off between activity and specificity.
Structure, 30, 2022
7EM7
DownloadVisualize
BU of 7em7 by Molmil
Crystal structure of the PI5P4Kbeta N203D-XTP complex
Descriptor: Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, [(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Senda, M, Senda, T.
Deposit date:2021-04-13
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:The GTP responsiveness of PI5P4K beta evolved from a compromised trade-off between activity and specificity.
Structure, 30, 2022
7EM5
DownloadVisualize
BU of 7em5 by Molmil
Crystal structure of the PI5P4Kbeta F205L-XTP complex
Descriptor: Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, [(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Senda, M, Senda, T.
Deposit date:2021-04-13
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The GTP responsiveness of PI5P4K beta evolved from a compromised trade-off between activity and specificity.
Structure, 30, 2022
7EM1
DownloadVisualize
BU of 7em1 by Molmil
Crystal structure of the PI5P4Kbeta-ITP complex
Descriptor: INOSINE-5'-DIPHOSPHATE, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, [[(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-(6-oxidanylidene-1~{H}-purin-9-yl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Senda, M, Senda, T.
Deposit date:2021-04-13
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The GTP responsiveness of PI5P4K beta evolved from a compromised trade-off between activity and specificity.
Structure, 30, 2022
7EM3
DownloadVisualize
BU of 7em3 by Molmil
Crystal structure of the PI5P4Kbeta-2a-ATP complex
Descriptor: Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, [(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Senda, M, Senda, T.
Deposit date:2021-04-13
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The GTP responsiveness of PI5P4K beta evolved from a compromised trade-off between activity and specificity.
Structure, 30, 2022
7EM4
DownloadVisualize
BU of 7em4 by Molmil
Crystal structure of the PI5P4Kbeta F205L-ITP complex
Descriptor: INOSINE-5'-DIPHOSPHATE, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, [[(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-(6-oxidanylidene-1~{H}-purin-9-yl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Senda, M, Senda, T.
Deposit date:2021-04-13
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The GTP responsiveness of PI5P4K beta evolved from a compromised trade-off between activity and specificity.
Structure, 30, 2022
7EM8
DownloadVisualize
BU of 7em8 by Molmil
Crystal structure of the PI5P4Kbeta T201M-2a-ATP complex
Descriptor: Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, [(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(azanyl)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Senda, M, Senda, T.
Deposit date:2021-04-13
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:The GTP responsiveness of PI5P4K beta evolved from a compromised trade-off between activity and specificity.
Structure, 30, 2022
7EM2
DownloadVisualize
BU of 7em2 by Molmil
Crystal structure of the PI5P4Kbeta-XTP complex
Descriptor: Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, [(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,6-bis(oxidanylidene)-3~{H}-purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Senda, M, Senda, T.
Deposit date:2021-04-13
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The GTP responsiveness of PI5P4K beta evolved from a compromised trade-off between activity and specificity.
Structure, 30, 2022
7AOT
DownloadVisualize
BU of 7aot by Molmil
The Fk1 domain of FKBP51 in complex with (2R,5S,12R)-12-cyclohexyl-2-[2-(3,4-dimethoxyphenyl)ethyl]-3,19-dioxa-10,13,16-triazatricyclo[18.3.1.0-5,10]tetracosa- 1(24),20,22-triene-4,11,14,17-tetrone
Descriptor: (2R,5S,12R)-12-cyclohexyl-2-[2-(3,4-dimethoxyphenyl)ethyl]-3,19-dioxa-10,13,16-triazatricyclo[18.3.1.0-5,10]tetracosa- 1(24),20,22-triene-4,11,14,17-tetrone, Peptidyl-prolyl cis-trans isomerase FKBP5
Authors:Voll, A.M, Meyners, C, Heymann, T, Merz, S, Purder, P, Bracher, A, Hausch, F.
Deposit date:2020-10-15
Release date:2021-04-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Macrocyclic FKBP51 Ligands Define a Transient Binding Mode with Enhanced Selectivity.
Angew.Chem.Int.Ed.Engl., 60, 2021
1CYC
DownloadVisualize
BU of 1cyc by Molmil
THE CRYSTAL STRUCTURE OF BONITO (KATSUO) FERROCYTOCHROME C AT 2.3 ANGSTROMS RESOLUTION. II. STRUCTURE AND FUNCTION
Descriptor: FERROCYTOCHROME C, HEME C
Authors:Tanaka, N, Yamane, T, Tsukihara, T, Ashida, T, Kakudo, M.
Deposit date:1976-08-01
Release date:1976-10-06
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of bonito (katsuo) ferrocytochrome c at 2.3 A resolution. II. Structure and function.
J.Biochem.(Tokyo), 77, 1975
7AWF
DownloadVisualize
BU of 7awf by Molmil
The Fk1 domain of FKBP51 in complex with (2R,5S,12R)-12-cyclohexyl-2-[2-(3,4-dimethoxyphenyl)ethyl]-15,15,16-trimethyl-3,19-dioxa-10,13,16-triazatricyclo[18.3.1.0^5,^10]tetracosa-1(24),20,22-triene-4,11,14,17-tetrone
Descriptor: (2~{R},5~{S},12~{R})-12-cyclohexyl-2-[2-(3,4-dimethoxyphenyl)ethyl]-15,15,16-trimethyl-3,19-dioxa-10,13,16-triazatricyclo[18.3.1.0^{5,10}]tetracosa-1(24),20,22-triene-4,11,14,17-tetrone, Peptidyl-prolyl cis-trans isomerase FKBP5
Authors:Voll, M.A, Meyners, C, Heymann, T, Merz, S, Purder, P, Bracher, A, Hausch, F.
Deposit date:2020-11-07
Release date:2021-04-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Macrocyclic FKBP51 Ligands Define a Transient Binding Mode with Enhanced Selectivity.
Angew.Chem.Int.Ed.Engl., 60, 2021

224201

數據於2024-08-28公開中

PDB statisticsPDBj update infoContact PDBjnumon