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1MHW
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BU of 1mhw by Molmil
Design of non-covalent inhibitors of human cathepsin L. From the 96-residue proregion to optimized tripeptides
Descriptor: 4-biphenylacetyl-Cys-(D)Arg-Tyr-N-(2-phenylethyl) amide, Cathepsin L
Authors:Chowdhury, S, Sivaraman, J, Wang, J, Devanathan, G, Lachance, P, Qi, H, Menard, R, Lefebvre, J, Konishi, Y, Cygler, M, Sulea, T, Purisima, E.O.
Deposit date:2002-08-21
Release date:2002-12-11
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design of non-covalent inhibitors of human cathepsin L. From the 96-residue proregion to optimized tripeptides
J.Med.Chem., 45, 2002
2GIO
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BU of 2gio by Molmil
Solution Structure of a portion of the 5'UTR of HspA mRNA of Bradyrhizobium japonicum
Descriptor: 29-MER
Authors:Chowdhury, S, Maris, C, Allain, F.H, Narberhaus, F.
Deposit date:2006-03-29
Release date:2006-06-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Molecular basis for temperature sensing by an RNA thermometer.
Embo J., 25, 2006
2GIP
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BU of 2gip by Molmil
Solution structure of a portion of the 5'UTR of HspA mRNA from Bradyrhizobium janponicum having deleted G83
Descriptor: 28-MER
Authors:Chowdhury, S, Maris, C, Allain, F.H, Narberhaus, F.
Deposit date:2006-03-29
Release date:2006-06-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Molecular basis for temperature sensing by an RNA thermometer.
Embo J., 25, 2006
5UZ9
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BU of 5uz9 by Molmil
Cryo EM structure of anti-CRISPRs, AcrF1 and AcrF2, bound to type I-F crRNA-guided CRISPR surveillance complex
Descriptor: Anti-CRISPR protein 30, Anti-CRISPR protein Acr30-35, CRISPR RNA (60-MER), ...
Authors:Chowdhury, S, Carter, J, Rollins, M.F, Jackson, R.N, Hoffmann, C, Nosaka, L, Bondy-Denomy, J, Maxwell, K.L, Davidson, A.R, Fischer, E.R, Lander, G.C, Wiedenheft, B.
Deposit date:2017-02-25
Release date:2017-04-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure Reveals Mechanisms of Viral Suppressors that Intercept a CRISPR RNA-Guided Surveillance Complex.
Cell, 169, 2017
8U71
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BU of 8u71 by Molmil
Structure of sea urchin SLC9C1 at pH 8 in Na+
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Digitonin, Sperm-specific sodium proton exchanger
Authors:Chowdhury, S, Pal, K.
Deposit date:2023-09-14
Release date:2025-03-26
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:SLC9C1 at pH 8 in presence of K+
To Be Published
8U7K
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BU of 8u7k by Molmil
WT sea urchin SLC9C1 with 5mM cAMP at pH 6 in Na+ - Grip (G) conformation
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Digitonin, ...
Authors:Chowdhury, S, Pal, K.
Deposit date:2023-09-15
Release date:2025-03-26
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure of WT sp9C1 with 5mM cAMP at pH 6 in Na+ - Grip (G) conformation
To Be Published
8U7R
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BU of 8u7r by Molmil
WT sea urchin SLC9C1 at pH 6 in presence of K+
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Digitonin, Sperm-specific sodium proton exchanger
Authors:Chowdhury, S, Pal, K.
Deposit date:2023-09-15
Release date:2025-03-26
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:WT sea urchin SLC9C1 at pH 6 in presence of K+
To Be Published
8U73
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BU of 8u73 by Molmil
R399A sea urchin SLC9C1 pH 8 in Na+
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Digitonin, Sperm-specific sodium proton exchanger
Authors:Chowdhury, S, Pal, K.
Deposit date:2023-09-14
Release date:2025-03-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of R399A mutant of sea urchin SLC9C1 at pH 8 in Na+
To Be Published
8U7D
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BU of 8u7d by Molmil
R399A mutant of sea urchin SLC9C1 at pH 6 in Na+ - Relaxed state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Digitonin, Sperm-specific sodium proton exchanger
Authors:Chowdhury, S, Pal, K.
Deposit date:2023-09-15
Release date:2025-03-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:R399A mutant of sea urchin SLC9C1 at pH 6 in Na+ - Relaxed form
To Be Published
8U75
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BU of 8u75 by Molmil
R399A mutant of sea urchin SLC9C1 at pH 6 in Na+ - Compressed state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Digitonin, Sperm-specific sodium proton exchanger
Authors:Chowdhury, S, Pal, K.
Deposit date:2023-09-14
Release date:2025-03-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:R399A mutant of sea urchin SLC9C1 at pH 6 in presence of Na+ - Compressed Form
To Be Published
8U7S
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BU of 8u7s by Molmil
SLC9C1 at pH 6 in presence of Na+
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Digitonin, Sperm-specific sodium proton exchanger
Authors:Chowdhury, S, Pal, K.
Deposit date:2023-09-15
Release date:2025-03-26
Method:ELECTRON MICROSCOPY (4.18 Å)
Cite:SLC9C1 at pH 6 in presence of Na+
To Be Published
8U7O
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BU of 8u7o by Molmil
WT sea urchin SLC9C1 with 5mM cAMP at pH 6 in Na+ - Grip and Twist (GnT) conformation
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Digitonin, ...
Authors:Chowdhury, S, Pal, K.
Deposit date:2023-09-15
Release date:2025-03-26
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of WT sp9C1 with 5mM cAMP at pH 6 in Na+ - Grip and Twist (GnT) conformation
To Be Published
8U6Z
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BU of 8u6z by Molmil
SLC9C1 at pH 8 in presence of K+
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Digitonin, Sperm-specific sodium proton exchanger
Authors:Chowdhury, S, Pal, K.
Deposit date:2023-09-14
Release date:2025-03-26
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:SLC9C1 at pH 8 in presence of K+
To Be Published
8U7P
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BU of 8u7p by Molmil
WT sea urchin SLC9C1 with 5mM cAMP at pH 6 in Na+ - Grip and Twist Like (GnTL) conformation
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Digitonin, ...
Authors:Chowdhury, S, Pal, K.
Deposit date:2023-09-15
Release date:2025-03-26
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of WT sp9C1 with 5mM cAMP at pH 6 in Na+ - Grip and Twist Like (GnTL) conformation
To Be Published
6NE0
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BU of 6ne0 by Molmil
Structure of double-stranded target DNA engaged Csy complex from Pseudomonas aeruginosa (PA-14)
Descriptor: CRISPR RNA (60-MER), CRISPR target DNA (44-MER), CRISPR-associated endonuclease Cas6/Csy4, ...
Authors:Chowdhury, S, Rollins, M.F, Carter, J, Golden, S.M, Miettinen, H.M, Santiago-Frangos, A, Faith, D, Lawrence, M.C, Wiedenheft, B, Lander, G.C.
Deposit date:2018-12-15
Release date:2018-12-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure Reveals a Mechanism of CRISPR-RNA-Guided Nuclease Recruitment and Anti-CRISPR Viral Mimicry.
Mol. Cell, 74, 2019
4UC0
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BU of 4uc0 by Molmil
Crystal Structure Of a purine nucleoside phosphorylase (PSI-NYSGRC-029736) from Agrobacterium vitis
Descriptor: HYPOXANTHINE, Purine nucleoside phosphorylase
Authors:Cameron, S.A, Sampathkumar, P, Ramagopal, U.A, Attonito, J, Ahmed, M, Bhosle, R, Bonanno, J, Chamala, S, Chowdhury, S, Glenn, A.S, Hammonds, J, Hillerich, B, Love, J.D, Seidel, R, Stead, M, Toro, R, Wasserman, S.R, Schramm, V.L, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-08-13
Release date:2014-10-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure Of a purine nucleoside phosphorylase (PSI-NYSGRC-029736) from Agrobacterium vitis
To be published
3SJN
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BU of 3sjn by Molmil
Crystal structure of enolase Spea_3858 (target EFI-500646) from Shewanella pealeana with magnesium bound
Descriptor: GLYCEROL, MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein, ...
Authors:Patskovsky, Y, Kim, J, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-06-21
Release date:2011-07-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Enolase Spea_3858 from Shewanella Pealeana
To be Published
7EZJ
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BU of 7ezj by Molmil
Crystal structure of p73 DNA binding domain complex bound with 1 bp and 2 bp spacer DNA response elements.
Descriptor: 12-mer DNA, Tumor protein p73, ZINC ION
Authors:Koley, T, Roy Chowdhury, S, Kumar, M, Kaur, P, Singh, T.P, Viadiu, H, Ethayathulla, A.S.
Deposit date:2021-06-01
Release date:2022-04-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Deciphering the mechanism of p73 recognition of p53 response elements using the crystal structure of p73-DNA complexes and computational studies.
Int.J.Biol.Macromol., 206, 2022
4WK5
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BU of 4wk5 by Molmil
Crystal structure of a Isoprenoid Synthase family member from Thermotoga neapolitana DSM 4359, target EFI-509458
Descriptor: Geranyltranstransferase
Authors:Toro, R, Bhosle, R, Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Poulter, C.D, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-10-01
Release date:2014-11-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a Isoprenoid Synthase family member from Thermotoga neapolitana DSM 4359, target EFI-509458
To be published
6W18
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BU of 6w18 by Molmil
Structure of S. pombe Arp2/3 complex in inactive state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-related protein 2, Actin-related protein 2/3 complex subunit 1, ...
Authors:Shaaban, M, Nolen, B.J, Chowdhury, S.
Deposit date:2020-03-03
Release date:2020-08-12
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM reveals the transition of Arp2/3 complex from inactive to nucleation-competent state.
Nat.Struct.Mol.Biol., 27, 2020
6W17
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BU of 6w17 by Molmil
Structure of Dip1-activated Arp2/3 complex with nucleated actin filament
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
Authors:Shaaban, M, Nolen, B.J, Chowdhury, S.
Deposit date:2020-03-03
Release date:2020-08-12
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM reveals the transition of Arp2/3 complex from inactive to nucleation-competent state.
Nat.Struct.Mol.Biol., 27, 2020
3M0E
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BU of 3m0e by Molmil
Crystal structure of the ATP-bound state of Walker B mutant of NtrC1 ATPase domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Transcriptional regulator (NtrC family)
Authors:Chen, B, Sysoeva, T.A, Chowdhury, S, Rusu, M, Birmanns, S, Guo, L, Hanson, J, Yang, H, Nixon, B.T.
Deposit date:2010-03-02
Release date:2010-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Engagement of Arginine Finger to ATP Triggers Large Conformational Changes in NtrC1 AAA+ ATPase for Remodeling Bacterial RNA Polymerase.
Structure, 18, 2010
9BWS
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BU of 9bws by Molmil
Structure of human k2P13.1 (THIK-1) S136P Y273A in lipid nanodisc
Descriptor: DECANE, DODECANE, HEXANE, ...
Authors:Roy-Chowdhury, S, Minor, D.L.
Deposit date:2024-05-21
Release date:2025-02-26
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (2.39 Å)
Cite:Structure of the human K 2P 13.1 channel reveals a hydrophilic pore restriction and lipid cofactor site.
Nat.Struct.Mol.Biol., 2025
9BSN
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BU of 9bsn by Molmil
Structure of human K2P13.1 (THIK-1) in lipid nanodisc
Descriptor: DECANE, DODECANE, LINOLEIC ACID, ...
Authors:Roy-Chowdhury, S, Minor, D.L.
Deposit date:2024-05-13
Release date:2025-02-26
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure of the human K 2P 13.1 channel reveals a hydrophilic pore restriction and lipid cofactor site.
Nat.Struct.Mol.Biol., 2025
9BYI
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BU of 9byi by Molmil
Structure of human K2P13.1 (THIK1) in detergent
Descriptor: DODECANE, HEXADECANE, HEXANE, ...
Authors:Roy-Chowdhury, S, Minor, D.L.
Deposit date:2024-05-23
Release date:2025-02-26
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structure of the human K 2P 13.1 channel reveals a hydrophilic pore restriction and lipid cofactor site.
Nat.Struct.Mol.Biol., 2025

238582

数据于2025-07-09公开中

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