Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4RQZ
DownloadVisualize
BU of 4rqz by Molmil
re-refinement of 1soz, Crystal Structure of DegS protease in complex with an activating peptide
Descriptor: Protease degS, activating peptide
Authors:Sauer, R.T, Grant, R.A.
Deposit date:2014-11-05
Release date:2015-03-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
4RR0
DownloadVisualize
BU of 4rr0 by Molmil
re-refined 1vcw, CRYSTAL STRUCTURE OF DEGS AFTER BACKSOAKING THE ACTIVATING PEPTIDE
Descriptor: Protease degS
Authors:Sauer, R.T, Grant, R.A.
Deposit date:2014-11-05
Release date:2015-03-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.054 Å)
Cite:A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
4RQY
DownloadVisualize
BU of 4rqy by Molmil
RE-REFINED STRUCTURE OF 1TE0 - STRUCTURAL ANALYSIS of DEGS, A STRESS SENSOR OF THE BACTERIAL PERIPLASM
Descriptor: PHOSPHATE ION, Protease degS
Authors:Sauer, R.T, Grant, R.A.
Deposit date:2014-11-05
Release date:2015-03-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
4RR1
DownloadVisualize
BU of 4rr1 by Molmil
re-refinement of entry 1sot, Crystal Structure of the DegS stress sensor
Descriptor: NICKEL (II) ION, PHOSPHATE ION, Protease degS
Authors:Sauer, R.T, Grant, R.A.
Deposit date:2014-11-05
Release date:2015-03-11
Last modified:2015-03-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Conserved Activation Cluster Is Required for Allosteric Communication in HtrA-Family Proteases.
Structure, 23, 2015
3OU0
DownloadVisualize
BU of 3ou0 by Molmil
re-refined 3CS0
Descriptor: Periplasmic serine endoprotease DegP, heptapeptide, pentapeptide
Authors:Sauer, R.T, Grant, R.A, Kim, S.
Deposit date:2010-09-14
Release date:2011-01-19
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Covalent Linkage of Distinct Substrate Degrons Controls Assembly and Disassembly of DegP Proteolytic Cages.
Cell(Cambridge,Mass.), 145, 2011
3EOD
DownloadVisualize
BU of 3eod by Molmil
Crystal structure of N-terminal domain of E. coli RssB
Descriptor: Protein hnr
Authors:Levchenko, I, Grant, R.A, Sauer, R.T, Baker, T.A.
Deposit date:2008-09-26
Release date:2009-10-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The structure of RssB, a ClpX adaptor protein that regulates sigma S
To be Published
3F7A
DownloadVisualize
BU of 3f7a by Molmil
Structure of Orthorhombic crystal form of Pseudomonas aeruginosa RssB
Descriptor: Probable two-component response regulator
Authors:levchenko, I, Grant, R.A, Sauer, R.T, Baker, T.A.
Deposit date:2008-11-07
Release date:2009-11-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (4.308 Å)
Cite:The structure of RSSB, a CLPX adaptor protein that regulates sigma S
To be Published
6PP7
DownloadVisualize
BU of 6pp7 by Molmil
ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-05
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.05 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6POD
DownloadVisualize
BU of 6pod by Molmil
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-03
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.05 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6PP5
DownloadVisualize
BU of 6pp5 by Molmil
ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-05
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6PO3
DownloadVisualize
BU of 6po3 by Molmil
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-03
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.28 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
5TXV
DownloadVisualize
BU of 5txv by Molmil
HslU P21 cell with 4 hexamers
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent protease ATPase subunit HslU
Authors:Grant, R.A, Chen, J, Glynn, S.E, Sauer, R.T.
Deposit date:2016-11-17
Release date:2017-03-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (7.086 Å)
Cite:Covalently linked HslU hexamers support a probabilistic mechanism that links ATP hydrolysis to protein unfolding and translocation.
J. Biol. Chem., 292, 2017
6BQC
DownloadVisualize
BU of 6bqc by Molmil
Cyclopropane fatty acid synthase from E. coli
Descriptor: (1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE, CARBONATE ION, Cyclopropane-fatty-acyl-phospholipid synthase, ...
Authors:Hari, S.B, Grant, R.A, Sauer, R.T.
Deposit date:2017-11-27
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.073 Å)
Cite:Structural and Functional Analysis of E. coli Cyclopropane Fatty Acid Synthase.
Structure, 26, 2018
7M1M
DownloadVisualize
BU of 7m1m by Molmil
Crystal structure of Pseudomonas aeruginosa ClpP1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ATP-dependent Clp protease proteolytic subunit
Authors:Mawla, G.D, Grant, R.A, Baker, T.A, Sauer, R.T.
Deposit date:2021-03-13
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:ClpP1P2 peptidase activity promotes biofilm formation in Pseudomonas aeruginosa.
Mol.Microbiol., 115, 2021
7M1L
DownloadVisualize
BU of 7m1l by Molmil
Crystal structure of Pseudomonas aeruginosa ClpP2
Descriptor: ATP-dependent Clp protease proteolytic subunit, PHOSPHATE ION
Authors:Hall, B.M, Grant, R.A, Baker, T.A, Sauer, R.T.
Deposit date:2021-03-13
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:ClpP1P2 peptidase activity promotes biofilm formation in Pseudomonas aeruginosa.
Mol.Microbiol., 115, 2021
5TXR
DownloadVisualize
BU of 5txr by Molmil
Structure of ALAS from S. cerevisiae non-covalently bound to PLP cofactor
Descriptor: 5-aminolevulinate synthase, mitochondrial, FORMIC ACID, ...
Authors:Brown, B.L, Grant, R.A, Kardon, J.R, Sauer, R.T, Baker, T.A.
Deposit date:2016-11-17
Release date:2018-03-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the Mitochondrial Aminolevulinic Acid Synthase, a Key Heme Biosynthetic Enzyme.
Structure, 26, 2018
5TXT
DownloadVisualize
BU of 5txt by Molmil
Structure of asymmetric apo/holo ALAS dimer from S. cerevisiae
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, 5-aminolevulinate synthase, mitochondrial, ...
Authors:Brown, B.L, Grant, R.A, Kardon, J.R, Sauer, R.T, Baker, T.A.
Deposit date:2016-11-17
Release date:2018-03-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the Mitochondrial Aminolevulinic Acid Synthase, a Key Heme Biosynthetic Enzyme.
Structure, 26, 2018
7UIY
DownloadVisualize
BU of 7uiy by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIIa
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
Authors:Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
Deposit date:2022-03-29
Release date:2022-10-26
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIW
DownloadVisualize
BU of 7uiw by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIb
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
Authors:Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
Deposit date:2022-03-29
Release date:2022-11-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UJ0
DownloadVisualize
BU of 7uj0 by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIIb
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
Authors:Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
Deposit date:2022-03-29
Release date:2022-11-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIX
DownloadVisualize
BU of 7uix by Molmil
ClpAP complex bound to ClpS N-terminal extension, class I
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
Authors:Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
Deposit date:2022-03-29
Release date:2022-11-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIZ
DownloadVisualize
BU of 7uiz by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIc
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
Authors:Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
Deposit date:2022-03-29
Release date:2022-11-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
7UIV
DownloadVisualize
BU of 7uiv by Molmil
ClpAP complex bound to ClpS N-terminal extension, class IIa
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpA, ATP-dependent Clp protease adapter protein ClpS, ...
Authors:Kim, S, Fei, X, Sauer, R.T, Baker, T.A.
Deposit date:2022-03-29
Release date:2022-11-09
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:AAA+ protease-adaptor structures reveal altered conformations and ring specialization.
Nat.Struct.Mol.Biol., 29, 2022
8E91
DownloadVisualize
BU of 8e91 by Molmil
Cryo-EM structure of substrate-free ClpX.ClpP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
Authors:Ghanbarpour, A, Davis, J.H, Sauer, R.T.
Deposit date:2022-08-26
Release date:2023-11-08
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Cryo-EM structure of substrate-free DNClpX.ClpP
Nat Commun, 2023
8E8Q
DownloadVisualize
BU of 8e8q by Molmil
Cryo-EM structure of substrate-free DNClpX.ClpP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ...
Authors:Ghanbarpour, A, Cohen, S, Davis, J.H, Sauer, R.T.
Deposit date:2022-08-25
Release date:2023-11-08
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Cryo-EM structure of substrate-free DNClpX.ClpP
Nat Commun, 2023

221716

数据于2024-06-26公开中

PDB statisticsPDBj update infoContact PDBjnumon