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Crystal structure of homoserine o-succinyltransferase (NP_981826.1) from Bacillus cereus ATCC 10987 at 2.40 A resolution
Descriptor:	Homoserine O-succinyltransferase, SULFATE ION
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2006-03-27
Release date:	2006-04-11
Last modified:	2024-11-20
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Crystal structure of homoserine O-succinyltransferase from Bacillus cereus at 2.4 A resolution Proteins, 68, 2007

2GLZ

Crystal structure of a formylmethanofuran dehydrogenase subunit e-like protein (dhaf_2992) from desulfitobacterium hafniense dcb-2 at 1.45 A resolution
Descriptor:	1,2-ETHANEDIOL, NICKEL (II) ION, ZINC ION, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2006-04-05
Release date:	2006-04-18
Last modified:	2024-11-20
Method:	X-RAY DIFFRACTION (1.45 Å)
Cite:	Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved alpha+beta core domain and an auxiliary C-terminal treble-clef zinc finger. Acta Crystallogr.,Sect.F, 66, 2010

2GVI

Crystal structure of a putative formylmethanofuran dehydrogenase subunit e (ta1109) from thermoplasma acidophilum at 1.87 A resolution
Descriptor:	1,2-ETHANEDIOL, ACETIC ACID, UNKNOWN LIGAND, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2006-05-02
Release date:	2006-06-13
Last modified:	2024-12-25
Method:	X-RAY DIFFRACTION (1.87 Å)
Cite:	Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved alpha+beta core domain and an auxiliary C-terminal treble-clef zinc finger. Acta Crystallogr.,Sect.F, 66, 2010

1F58

IGG1 FAB FRAGMENT (58.2) COMPLEX WITH 24-RESIDUE PEPTIDE (RESIDUES 308-333 OF HIV-1 GP120 (MN ISOLATE) WITH ALA TO AIB SUBSTITUTION AT POSITION 323
Descriptor:	Envelope glycoprotein gp120, PROTEIN (IGG1 ANTIBODY 58.2 (HEAVY CHAIN)), PROTEIN (IGG1 ANTIBODY 58.2 (LIGHT CHAIN))
Authors:	Stanfield, R.L, Cabezas, E, Satterthwait, A.C, Stura, E.A, Profy, A.T, Wilson, I.A.
Deposit date:	1998-10-21
Release date:	1999-02-02
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Dual conformations for the HIV-1 gp120 V3 loop in complexes with different neutralizing fabs. Structure Fold.Des., 7, 1999

4EPS

Crystal structure of a fimbrial protein (BACOVA_04982) from Bacteroides ovatus ATCC 8483 at 1.85 A resolution
Descriptor:	CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2012-04-17
Release date:	2012-06-13
Last modified:	2024-11-27
Method:	X-RAY DIFFRACTION (1.85 Å)
Cite:	A Distinct Type of Pilus from the Human Microbiome. Cell, 165, 2016

9CFA

Germline-targeting HIV-1 gp120 engineered outer domain eODgt8 in complex with Fab eOD-CL04.1
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab eOD-CL04.1 heavy chain, ...
Authors:	Sarkar, A, Stanfield, R.L, Wilson, I.A.
Deposit date:	2024-06-27
Release date:	2025-06-25
Method:	X-RAY DIFFRACTION (3.06 Å)
Cite:	Diverse competitor B cell responses to a germline-targeting priming immunogen in human Ig loci transgenic mice To Be Published

9CF6

Germline-targeting HIV-1 gp120 engineered outer domain eODgt8 in complex with Fab eOD-CL02.1
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Fab eOD-CL02.1 heavy chain, Fab eOD-CL02.1 lambda light chain, ...
Authors:	Sarkar, A, Stanfield, R.L, Wilson, I.A.
Deposit date:	2024-06-27
Release date:	2025-06-25
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	Diverse competitor B cell responses to a germline-targeting priming immunogen in human Ig loci transgenic mice To Be Published

9CF7

Germline-targeting HIV-1 gp120 engineered outer domain eODgt8 in complex with Fab eOD-PL01.1
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Fab eOD-PL01.1 heavy chain, Fab eOD-PL01.1 kappa light chain, ...
Authors:	Sarkar, A, Stanfield, R.L, Wilson, I.A.
Deposit date:	2024-06-27
Release date:	2025-06-25
Method:	X-RAY DIFFRACTION (3.55 Å)
Cite:	Diverse competitor B cell responses to a germline-targeting priming immunogen in human Ig loci transgenic mice To Be Published

4DGU

Crystal structure of a putative cell adhesion protein (BT0320) from Bacteroides thetaiotaomicron VPI-5482 at 2.37 A resolution
Descriptor:	CHLORIDE ION, ZINC ION, putative cell adhesion protein
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2012-01-26
Release date:	2012-02-15
Last modified:	2024-11-20
Method:	X-RAY DIFFRACTION (2.37 Å)
Cite:	A Distinct Type of Pilus from the Human Microbiome. Cell, 165, 2016

4FDY

Crystal structure of a similar to lipoprotein, NLP/P60 family (SAV0400) from Staphylococcus aureus subsp. aureus Mu50 at 2.23 A resolution
Descriptor:	Similar to lipoprotein, NLP/P60 family
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2012-05-29
Release date:	2012-07-25
Last modified:	2023-02-01
Method:	X-RAY DIFFRACTION (2.23 Å)
Cite:	Structures of a Bifunctional Cell Wall Hydrolase CwlT Containing a Novel Bacterial Lysozyme and an NlpC/P60 dl-Endopeptidase. J.Mol.Biol., 426, 2014

9C3G

human cGAS core domain (K427E/K428E) bound to Cladophorol A
Descriptor:	Cyclic GMP-AMP synthase, ZINC ION, cladophorol A
Authors:	Kissai, M, Stanfield, R.L, Lairson, L.L.
Deposit date:	2024-05-31
Release date:	2025-03-05
Method:	X-RAY DIFFRACTION (2.75 Å)
Cite:	Cladophorol-A is an inhibitor of cyclic GMP-AMP synthase. Bioorg.Med.Chem.Lett., 115, 2025

4GEZ

Structure of a neuraminidase-like protein from A/bat/Guatemala/164/2009
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:	Yang, H, Carney, P.J, Donis, R.O, Stevens, J.
Deposit date:	2012-08-02
Release date:	2012-09-26
Last modified:	2024-11-06
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Crystal structures of two subtype N10 neuraminidase-like proteins from bat influenza A viruses reveal a diverged putative active site. Proc.Natl.Acad.Sci.USA, 109, 2012

4H40

Crystal structure of a putative cell adhesion protein (BF2867) from Bacteroides fragilis NCTC 9343 at 2.57 A resolution
Descriptor:	CHLORIDE ION, putative cell adhesion protein
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2012-09-14
Release date:	2012-10-03
Last modified:	2024-11-27
Method:	X-RAY DIFFRACTION (2.57 Å)
Cite:	A Distinct Type of Pilus from the Human Microbiome. Cell, 165, 2016

8DT8

LM18/Nb136 bispecific tetra-nanobody immunoglobulin in complex with SARS-CoV-2-6P-Mut7 S protein (focused refinement)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, LM18 nanobody, Nb136 nanobody, ...
Authors:	Ozorowski, G, Turner, H.L, Ward, A.B.
Deposit date:	2022-07-25
Release date:	2023-06-14
Last modified:	2024-11-20
Method:	ELECTRON MICROSCOPY (3.34 Å)
Cite:	Fully synthetic platform to rapidly generate tetravalent bispecific nanobody-based immunoglobulins. Proc.Natl.Acad.Sci.USA, 120, 2023

8DYT

Cryo-EM structure of 227 Fab in complex with (NPNA)8 peptide
Descriptor:	227 Fab heavy chain, 227 Fab light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-05
Release date:	2023-08-02
Last modified:	2025-05-14
Method:	ELECTRON MICROSCOPY (3.3 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

8DZ5

Cryo-EM structure of 364 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Descriptor:	364 Fab heavy chain, 364 Fab light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-06
Release date:	2023-08-02
Last modified:	2025-06-04
Method:	ELECTRON MICROSCOPY (3.84 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

8DYX

Cryo-EM structure of 311 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Descriptor:	311 heavy chain, 311 light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-05
Release date:	2023-08-02
Last modified:	2025-05-21
Method:	ELECTRON MICROSCOPY (3 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

8DYW

Cryo-EM structure of 239 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Descriptor:	239 Fab heavy chain, 239 Fab light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-05
Release date:	2023-08-02
Last modified:	2025-05-21
Method:	ELECTRON MICROSCOPY (3.72 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

8DZ4

Cryo-EM structure of 356 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Descriptor:	356 Fab heavy chain, 356 Fab light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-06
Release date:	2023-08-02
Last modified:	2025-05-28
Method:	ELECTRON MICROSCOPY (3.2 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

8DYY

Cryo-EM structure of 334 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Descriptor:	334 Fab heavy chain, 334 Fab light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-05
Release date:	2023-08-02
Last modified:	2025-05-28
Method:	ELECTRON MICROSCOPY (3.62 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

8DZ3

Cryo-EM structure of 337 Fab in complex with recombinant shortened Plasmodium falciparum circumsporozoite protein (rsCSP)
Descriptor:	337 Fab heavy chain, 337 Fab light chain, Circumsporozoite protein
Authors:	Martin, G.M, Ward, A.B.
Deposit date:	2022-08-06
Release date:	2023-08-02
Last modified:	2025-05-21
Method:	ELECTRON MICROSCOPY (2.7 Å)
Cite:	Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection. Nat Commun, 14, 2023

4J1U

Crystal structure of antibody 93F3 unstable variant
Descriptor:	antibody 93F3 Heavy chain, antibody 93F3 Light chain
Authors:	Wang, F.
Deposit date:	2013-02-02
Release date:	2013-03-13
Last modified:	2024-10-16
Method:	X-RAY DIFFRACTION (2.58 Å)
Cite:	Somatic hypermutation maintains antibody thermodynamic stability during affinity maturation. Proc.Natl.Acad.Sci.USA, 110, 2013

4JRF

Crystal structure of a putative cell adhesion protein (BACOVA_01548) from Bacteroides ovatus ATCC 8483 at 1.98 A resolution (PSI Community Target, Nakayama)
Descriptor:	CALCIUM ION, CHLORIDE ION, SULFATE ION, ...
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2013-03-21
Release date:	2013-04-03
Last modified:	2024-11-06
Method:	X-RAY DIFFRACTION (1.98 Å)
Cite:	A Distinct Type of Pilus from the Human Microbiome. Cell, 165, 2016

8EQN

BG505 UFO-E2p-L4P nanoparticle reconstructed by focused refinement with a mask around the nanoparticle core
Descriptor:	BG505 UFO-E2p-L4P
Authors:	Antanasijevic, A, Zhang, Y.N, Zhu, J, Ward, A.B.
Deposit date:	2022-10-08
Release date:	2023-04-19
Last modified:	2024-06-19
Method:	ELECTRON MICROSCOPY (3.7 Å)
Cite:	Single-component multilayered self-assembling protein nanoparticles presenting glycan-trimmed uncleaved prefusion optimized envelope trimmers as HIV-1 vaccine candidates. Nat Commun, 14, 2023

4JG5

Crystal structure of a putative cell adhesion protein (BDI_3519) from Parabacteroides distasonis ATCC 8503 at 2.34 A resolution (PSI Community Target, Nakayama)
Descriptor:	Putative cell adhesion protein
Authors:	Joint Center for Structural Genomics (JCSG)
Deposit date:	2013-02-28
Release date:	2013-03-20
Last modified:	2024-11-20
Method:	X-RAY DIFFRACTION (2.34 Å)
Cite:	A Distinct Type of Pilus from the Human Microbiome. Cell, 165, 2016

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