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8J76
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BU of 8j76 by Molmil
Human high-affinity choline transporter CHT1 in the inward-facing apo-open conformation
Descriptor: High affinity choline transporter 1, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Gao, Y, Qiu, Y, Zhao, Y.
Deposit date:2023-04-27
Release date:2024-04-10
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Transport mechanism of presynaptic high-affinity choline uptake by CHT1.
Nat.Struct.Mol.Biol., 31, 2024
8J74
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BU of 8j74 by Molmil
Human high-affinity choline transporter CHT1 in the HC-3-bound outward-facing open conformation, dimeric state
Descriptor: (2S,2'S)-2,2'-biphenyl-4,4'-diylbis(2-hydroxy-4,4-dimethylmorpholin-4-ium), CHOLESTEROL HEMISUCCINATE, HEXADECANE, ...
Authors:Gao, Y, Qiu, Y, Zhao, Y.
Deposit date:2023-04-27
Release date:2024-04-03
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Transport mechanism of presynaptic high-affinity choline uptake by CHT1.
Nat.Struct.Mol.Biol., 31, 2024
7BTK
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BU of 7btk by Molmil
E.coli beta-galactosidase (E537Q) in complex with fluorescent probe KSA01
Descriptor: 4-[[2-[(E)-2-[4-[(2S,3R,4S,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]ethenyl]-3,3-dimethyl-2H-indol-1-yl]methyl]benzoic acid, Beta-galactosidase, DIMETHYL SULFOXIDE, ...
Authors:Chen, X, Hu, Y.L, Liu, Q.M, Gao, Y, Yuan, R, Guo, Y.
Deposit date:2020-04-01
Release date:2021-03-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Two-Dimensional Design Strategy to Construct Smart Fluorescent Probes for the Precise Tracking of Senescence.
Angew.Chem.Int.Ed.Engl., 60, 2021
7BRS
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BU of 7brs by Molmil
E.coli beta-galactosidase (E537Q) in complex with fluorescent probe KSA02
Descriptor: 8-[2-[(E)-2-[4-[(2S,3R,4S,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]ethenyl]-3,3-dimethyl-indol-1-ium-1-yl]octanoic acid, Beta-galactosidase, DIMETHYL SULFOXIDE, ...
Authors:Chen, X, Hu, Y.L, Gao, Y, Yuan, R, Guo, Y.
Deposit date:2020-03-30
Release date:2021-03-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Two-Dimensional Design Strategy to Construct Smart Fluorescent Probes for the Precise Tracking of Senescence.
Angew.Chem.Int.Ed.Engl., 60, 2021
7D2W
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BU of 7d2w by Molmil
Crystal structure of PHIT/PHISTa-like subfamily PF3D7_1372300 protein from plasmodium falciparum
Descriptor: MERCURY (II) ION, PRESAN domain-containing protein
Authors:Gao, Y, Yang, B.L.
Deposit date:2020-09-17
Release date:2021-09-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural analysis of binding between Plasmodium falciparum PHIST and the parasite virulence factor PfEMP1 protein
To Be Published
7YDS
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BU of 7yds by Molmil
The structure of the bispecific antibody targeted PD-L1 and 4-1BB
Descriptor: Anti-PDL1-VH-CH1, Anti-PDL1-VL-CL, Programmed cell death 1 ligand 1
Authors:Gao, Y, Zhu, M, Liu, W.T, Cheng, L.S, Zhu, Z.L, Niu, L.W.
Deposit date:2022-07-04
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A bispecific antibody targeted PD-L1 and 4-1BB induces a potent antitumor immune activity in colorectal cancer without systemic toxicity
To Be Published
7O6E
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BU of 7o6e by Molmil
2.12 A cryo-EM structure of Mycobacterium tuberculosis Ferritin
Descriptor: Ferritin BfrB
Authors:Gijsbers, A, Zhang, Y, Gao, Y, Peters, P.J, Ravelli, R.B.G.
Deposit date:2021-04-10
Release date:2021-05-19
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Mycobacterium tuberculosis ferritin: a suitable workhorse protein for cryo-EM development.
Acta Crystallogr D Struct Biol, 77, 2021
8RYZ
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BU of 8ryz by Molmil
Structures of selenoneine synthase SenA from Variovorax paradoxus
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, IMIDAZOLE, ...
Authors:Ma, Y.Y, Gao, Y, Xu, S.H.
Deposit date:2024-02-11
Release date:2024-09-11
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structures of SenB and SenA enzymes from Variovorax paradoxus provide insights into carbon-selenium bond formation in selenoneine biosynthesis.
Heliyon, 10, 2024
8RZ3
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BU of 8rz3 by Molmil
Structures of Se- glycosyltransferase SenB from Variovorax paradoxus
Descriptor: TIGR04348 family glycosyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
Authors:Ma, Y.Y, Gao, Y, Xu, S.H.
Deposit date:2024-02-12
Release date:2024-09-11
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structures of SenB and SenA enzymes from Variovorax paradoxus provide insights into carbon-selenium bond formation in selenoneine biosynthesis.
Heliyon, 10, 2024
3DAP
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BU of 3dap by Molmil
C. GLUTAMICUM DAP DEHYDROGENASE IN COMPLEX WITH NADP+ AND THE INHIBITOR 5S-ISOXAZOLINE
Descriptor: (2S,5',S)-2-AMINO-3-(3-CARBOXY-2-ISOXAZOLIN-5-YL)PROPANOIC ACID, DIAMINOPIMELIC ACID DEHYDROGENASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Scapin, G, Cirilli, M, Reddy, S.G, Gao, Y, Vederas, J.C, Blanchard, J.S.
Deposit date:1997-12-29
Release date:1998-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate and inhibitor binding sites in Corynebacterium glutamicum diaminopimelate dehydrogenase.
Biochemistry, 37, 1998
7P13
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BU of 7p13 by Molmil
2.29 A Mycobacterium tuberculosis EspB.
Descriptor: ESX-1 secretion-associated protein EspB
Authors:Gijsbers, A, Zhang, Y, Vinciauskaite, V, Siroy, A, Gao, Y, Tria, G, Mathew, A, Sanchez-Puig, N, Lopez-Iglesias, C, Peters, P.J, Ravelli, R.B.G.
Deposit date:2021-07-01
Release date:2021-08-18
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.29 Å)
Cite:Priming mycobacterial ESX-secreted protein B to form a channel-like structure.
Curr Res Struct Biol, 3, 2021
1J48
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BU of 1j48 by Molmil
Crystal Structure of Apo-C1027
Descriptor: Apoprotein of C1027
Authors:Chen, Y, Li, J, Liu, Y, Bartlam, M, Gao, Y, Jin, L, Tang, H, Shao, Y, Zhen, Y, Rao, Z.
Deposit date:2001-07-30
Release date:2003-06-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Apo-C1027 and Computer Modeling Analysis of C1027 Chromophore- Protein Complex
To be published
8S94
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BU of 8s94 by Molmil
Structure of C-terminal domains of Walker B mutated MCM8/9 heterohexamer complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA helicase MCM8, DNA helicase MCM9, ...
Authors:Li, C, Gao, Y.
Deposit date:2023-03-27
Release date:2023-06-07
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (3.94 Å)
Cite:Activity, substrate preference and structure of the HsMCM8/9 helicase.
Nucleic Acids Res., 51, 2023
8S91
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BU of 8s91 by Molmil
Structure of Walker B mutated MCM8/9 heterohexamer complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA helicase MCM8, DNA helicase MCM9, ...
Authors:Li, C, Gao, Y.
Deposit date:2023-03-27
Release date:2023-06-07
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Activity, substrate preference and structure of the HsMCM8/9 helicase.
Nucleic Acids Res., 51, 2023
8S92
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BU of 8s92 by Molmil
Structure of N-terminal domains of Walker B mutated MCM8/9 heterohexamer complex with ADP
Descriptor: DNA helicase MCM8, DNA helicase MCM9
Authors:Li, C, Gao, Y.
Deposit date:2023-03-27
Release date:2023-06-07
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (4.06 Å)
Cite:Activity, substrate preference and structure of the HsMCM8/9 helicase.
Nucleic Acids Res., 51, 2023
8AKO
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BU of 8ako by Molmil
Structure of EspB-EspK complex: the non-identical twin of the PE-PPE-EspG secretion mechanism.
Descriptor: ESX-1 secretion-associated protein EspB, ESX-1 secretion-associated protein EspK
Authors:Gijsbers, A, Eymery, M, Menart, I, Vinciauskaite, V, Gao, Y, Siliqi, D, Peters, P, Mccarthy, A, Ravelli, R.B.G.
Deposit date:2022-07-30
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:The crystal structure of the EspB-EspK virulence factor-chaperone complex suggests an additional type VII secretion mechanism in Mycobacterium tuberculosis.
J.Biol.Chem., 299, 2022
2WLS
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BU of 2wls by Molmil
Crystal structure of Mus musculus Acetylcholinesterase in complex with AMTS13
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, DI(HYDROXYETHYL)ETHER, ...
Authors:Pang, Y.P, Ekstrom, F, Polsinelli, G.A, Gao, Y, Rana, S, Hua, D.H, Andersson, B, Andersson, P.O, Peng, L, Singh, S.K, Mishra, R.K, Zhu, K.Y, Fallon, A.M, Ragsdale, D.W, Brimijoin, S.
Deposit date:2009-06-25
Release date:2009-09-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Selective and Irreversible Inhibitors of Mosquito Acetylcholinesterases for Controlling Malaria and Other Mosquito-Borne Diseases.
Plos One, 4, 2009
4KNF
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BU of 4knf by Molmil
Crystal structure of a blue-light absorbing proteorhodopsin double-mutant D97N/Q105L from HOT75
Descriptor: Blue-light absorbing proteorhodopsin, RETINAL
Authors:Ran, T, Ozorowski, G, Gao, Y, Wang, W, Luecke, H.
Deposit date:2013-05-09
Release date:2013-06-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Cross-protomer interaction with the photoactive site in oligomeric proteorhodopsin complexes.
Acta Crystallogr.,Sect.D, 69, 2013
4KLY
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BU of 4kly by Molmil
Crystal structure of a blue-light absorbing proteorhodopsin mutant D97N from HOT75
Descriptor: Blue-light absorbing proteorhodopsin, RETINAL
Authors:Ran, T, Ozorowski, G, Gao, Y, Wang, W, Luecke, H.
Deposit date:2013-05-07
Release date:2013-06-05
Last modified:2013-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cross-protomer interaction with the photoactive site in oligomeric proteorhodopsin complexes.
Acta Crystallogr.,Sect.D, 69, 2013
2OGD
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BU of 2ogd by Molmil
T. Brucei Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-527
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, BETA-MERCAPTOETHANOL, ...
Authors:Cao, R, Gao, Y, Robinson, H, Goddard, A, Oldfield, E.
Deposit date:2007-01-05
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bisphosphonates: Teaching Old Drugs with New Tricks
TO BE PUBLISHED
6O8A
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BU of 6o8a by Molmil
Thaumatin native-SAD structure determined at 5 keV from microcrystals
Descriptor: L(+)-TARTARIC ACID, Thaumatin-1
Authors:Guo, G, Zhu, P, Fuchs, M.R, Shi, W, Andi, B, Gao, Y, Hendrickson, W.A, McSweeney, S, Liu, Q.
Deposit date:2019-03-09
Release date:2019-05-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Synchrotron microcrystal native-SAD phasing at a low energy.
Iucrj, 6, 2019
1K5W
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BU of 1k5w by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE SYNAPTOTAGMIN 1 C2B-DOMAIN: SYNAPTOTAGMIN 1 AS A PHOSPHOLIPID BINDING MACHINE
Descriptor: CALCIUM ION, Synaptotagmin I
Authors:Fernandez, I, Arac, D, Ubach, J, Gerber, S.H, Shin, O, Gao, Y, Anderson, R.G.W, Sudhof, T.C, Rizo, J.
Deposit date:2001-10-12
Release date:2002-01-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional structure of the synaptotagmin 1 C2B-domain: synaptotagmin 1 as a phospholipid binding machine.
Neuron, 32, 2001
4EAY
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BU of 4eay by Molmil
Crystal structures of mannonate dehydratase from Escherichia coli strain K12 complexed with D-mannonate
Descriptor: CHLORIDE ION, D-MANNONIC ACID, MANGANESE (II) ION, ...
Authors:Qiu, X, Zhu, Y, Yuan, Y, Zhang, Y, Liu, H, Gao, Y, Teng, M, Niu, L.
Deposit date:2012-03-23
Release date:2013-03-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural insights into decreased enzymatic activity induced by an insert sequence in mannonate dehydratase from Gram negative bacterium.
J.Struct.Biol., 180, 2012
4YCI
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BU of 4yci by Molmil
non-latent pro-bone morphogenetic protein 9
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Bone Morphogenetic Protein 9 Growth Factor Domain, ...
Authors:Mi, L.Z, Brown, C.T, Gao, Y, Tian, Y, Le, V, Walz, T, Springer, T.A.
Deposit date:2015-02-20
Release date:2015-03-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structure of bone morphogenetic protein 9 procomplex.
Proc.Natl.Acad.Sci.USA, 112, 2015
4EAC
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BU of 4eac by Molmil
Crystal structure of mannonate dehydratase from Escherichia coli strain K12
Descriptor: CHLORIDE ION, MANGANESE (II) ION, Mannonate dehydratase
Authors:Qiu, X, Zhu, Y, Yuan, Y, Zhang, Y, Liu, H, Gao, Y, Teng, M, Niu, L.
Deposit date:2012-03-22
Release date:2013-03-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into decreased enzymatic activity induced by an insert sequence in mannonate dehydratase from Gram negative bacterium.
J.Struct.Biol., 180, 2012

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