Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7PWF
DownloadVisualize
BU of 7pwf by Molmil
Cryo-EM structure of small subunit of Giardia lamblia ribosome at 2.9 A resolution
Descriptor: 40S ribosomal protein S21, 40S ribosomal protein S25, 40S ribosomal protein S26, ...
Authors:Hiregange, D.G, Rivalta, A, Bose, T, Breiner-Goldstein, E, Samiya, S, Cimicata, G, Kulakova, L, Zimmerman, E, Bashan, A, Herzberg, O, Yonath, A.
Deposit date:2021-10-06
Release date:2022-05-25
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Cryo-EM structure of the ancient eukaryotic ribosome from the human parasite Giardia lamblia.
Nucleic Acids Res., 50, 2022
1XI2
DownloadVisualize
BU of 1xi2 by Molmil
Quinone Reductase 2 in Complex with Cancer Prodrug CB1954
Descriptor: 5-(AZIRIDIN-1-YL)-2,4-DINITROBENZAMIDE, FLAVIN-ADENINE DINUCLEOTIDE, NRH dehydrogenase [quinone] 2, ...
Authors:Fu, Y, Buryanovskyy, L, Zhang, Z.
Deposit date:2004-09-21
Release date:2005-08-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of quinone reductase 2 in complex with cancer prodrug CB1954
Biochem.Biophys.Res.Commun., 336, 2005
5LJF
DownloadVisualize
BU of 5ljf by Molmil
Crystal structure of the endo-1,4-glucanase RBcel1 E135A with cellotriose
Descriptor: Endoglucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Dutoit, R, Collet, L, Galleni, M, Bauvois, C.
Deposit date:2016-07-18
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.734396 Å)
Cite:Glycoside hydrolase family 5: structural snapshots highlighting the involvement of two conserved residues in catalysis.
Acta Crystallogr D Struct Biol, 77, 2021
5ANB
DownloadVisualize
BU of 5anb by Molmil
Mechanism of eIF6 release from the nascent 60S ribosomal subunit
Descriptor: 26S RIBOSOMAL RNA, 60S ACIDIC RIBOSOMAL PROTEIN P0, 60S RIBOSOMAL PROTEIN L10, ...
Authors:Weis, F, Giudice, E, Churcher, M, Jin, L, Hilcenko, C, Wong, C.C, Traynor, D, Kay, R.R, Warren, A.J.
Deposit date:2015-09-06
Release date:2015-10-21
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Mechanism of Eif6 Release from the Nascent 60S Ribosomal Subunit
Nat.Struct.Mol.Biol., 22, 2015
1XIO
DownloadVisualize
BU of 1xio by Molmil
Anabaena sensory rhodopsin
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ANABAENA SENSORY RHODOPSIN, RETINAL
Authors:Vogeley, L, Luecke, H.
Deposit date:2004-09-21
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Anabaena sensory rhodopsin: a photochromic color sensor at 2.0 A.
Science, 306, 2004
5LKJ
DownloadVisualize
BU of 5lkj by Molmil
Crystal structure of mouse CARM1 in complex with ligand SA684
Descriptor: (2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-(2-carbamimidamidoethyl)amino]-2-azanyl-butanoic acid, 1,2-DIMETHOXYETHANE, 1,2-ETHANEDIOL, ...
Authors:Cura, V, Marechal, N, Mailliot, J, Troffer-Charlier, N, Hassenboehler, P, Wurtz, J.M, Bonnefond, L, Cavarelli, J.
Deposit date:2016-07-22
Release date:2017-08-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.595 Å)
Cite:Crystal structure of mouse CARM1 in complex with ligands
To Be Published
7Q0R
DownloadVisualize
BU of 7q0r by Molmil
Structure of the Candida albicans 80S ribosome in complex with blasticidin s
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ...
Authors:Kolosova, O, Zgadzay, Y, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
Deposit date:2021-10-16
Release date:2022-05-25
Last modified:2022-06-08
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
5LDT
DownloadVisualize
BU of 5ldt by Molmil
Crystal Structures of MOMP from Campylobacter jejuni
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CALCIUM ION, MOMP porin
Authors:Ferrara, L.G.M, Wallat, G.D, Moynie, L, Naismith, J.H.
Deposit date:2016-06-27
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:MOMP from Campylobacter jejuni Is a Trimer of 18-Stranded beta-Barrel Monomers with a Ca(2+) Ion Bound at the Constriction Zone.
J.Mol.Biol., 428, 2016
5ALL
DownloadVisualize
BU of 5all by Molmil
ligand complex structure of soluble epoxide hydrolase
Descriptor: DIMETHYL SULFOXIDE, SOLUBLE EPOXIDE HYDROLASE, SULFATE ION, ...
Authors:Oster, L, Tapani, S, Xue, Y, Kack, H.
Deposit date:2015-03-08
Release date:2015-05-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Successful Generation of Structural Information for Fragment-Based Drug Discovery.
Drug Discov Today, 20, 2015
6HU8
DownloadVisualize
BU of 6hu8 by Molmil
Apo form of the competence regulator ComR from Streptococcus vestibularis
Descriptor: Transcriptional regulator ComR
Authors:Nessler, S, Thuillier, J, Ledesma, L, Hols, P.
Deposit date:2018-10-05
Release date:2019-10-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.894 Å)
Cite:Molecular dissection of pheromone selectivity in the competence signaling system ComRS of streptococci.
Proc.Natl.Acad.Sci.USA, 117, 2020
5XP7
DownloadVisualize
BU of 5xp7 by Molmil
C-Src in complex with ATP-CHCl
Descriptor: GLYCEROL, MAGNESIUM ION, Proto-oncogene tyrosine-protein kinase Src, ...
Authors:Guo, M, Dai, S, Duan, Y, Chen, L, Chen, Y.
Deposit date:2017-06-01
Release date:2017-09-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.012 Å)
Cite:Remarkably Stereospecific Utilization of ATP alpha , beta-Halomethylene Analogues by Protein Kinases.
J. Am. Chem. Soc., 139, 2017
1XDQ
DownloadVisualize
BU of 1xdq by Molmil
Structural and Biochemical Identification of a Novel Bacterial Oxidoreductase
Descriptor: Bacterial Sulfite Oxidase, MOLYBDENUM ATOM, OXYGEN ATOM, ...
Authors:Loschi, L, Brokx, S.J, Hills, T.L, Zhang, G, Bertero, M.G, Lovering, A.L, Weiner, J.H, Strynadka, N.C.
Deposit date:2004-09-07
Release date:2004-10-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural and biochemical identification of a novel bacterial oxidoreductase.
J.Biol.Chem., 279, 2004
5ANC
DownloadVisualize
BU of 5anc by Molmil
Mechanism of eIF6 release from the nascent 60S ribosomal subunit
Descriptor: 26S RIBOSOMAL RNA, 60S ACIDIC RIBOSOMAL PROTEIN P0, 60S RIBOSOMAL PROTEIN L10, ...
Authors:Weis, F, Giudice, E, Churcher, M, Jin, L, Hilcenko, C, Wong, C.C, Traynor, D, Kay, R.R, Warren, A.J.
Deposit date:2015-09-06
Release date:2015-10-21
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Mechanism of Eif6 Release from the Nascent 60S Ribosomal Subunit
Nat.Struct.Mol.Biol., 22, 2015
1XN5
DownloadVisualize
BU of 1xn5 by Molmil
Solution Structure of Bacillus halodurans Protein BH1534: The Northeast Structural Genomics Consortium Target BhR29
Descriptor: BH1534 unknown conserved protein
Authors:Liu, G, Ma, L, Shen, Y, Acton, T, Atreya, H.S, Xiao, R, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2004-10-04
Release date:2004-12-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of Bacillus halodurans Protein BH1534: The Northeast Structural Genomics Consortium Target BhR29
To be Published
1XFP
DownloadVisualize
BU of 1xfp by Molmil
Crystal structure of the CDR2 germline reversion mutant of cAb-Lys3 in complex with hen egg white lysozyme
Descriptor: FORMIC ACID, Lysozyme C, heavy chain antibody
Authors:De Genst, E, Handelberg, F, Van Meirhaeghe, A, Vynck, S, Loris, R, Wyns, L, Muyldermans, S.
Deposit date:2004-09-15
Release date:2004-09-28
Last modified:2013-02-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Chemical Basis for the Affinity Maturation of a Camel Single Domain Antibody
J.Biol.Chem., 279, 2004
5LG5
DownloadVisualize
BU of 5lg5 by Molmil
Crystal structure of allantoin racemase from Pseudomonas fluorescens AllR
Descriptor: Allantoin racemase
Authors:Cendron, l, Zanotti, G, Percudani, R, Ragazzina, I, Puggioni, V, Maccacaro, E, Liuzzi, A, Secchi, A.
Deposit date:2016-07-06
Release date:2017-05-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structure and Function of a Microbial Allantoin Racemase Reveal the Origin and Conservation of a Catalytic Mechanism.
Biochemistry, 55, 2016
1MWY
DownloadVisualize
BU of 1mwy by Molmil
Solution structure of the N-terminal domain of ZntA in the apo-form
Descriptor: ZntA
Authors:Banci, L, Bertini, I, Ciofi-Baffoni, S, Finney, L.A, Outten, C.E, O'Halloran, T.V.
Deposit date:2002-10-01
Release date:2002-11-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A new zinc-protein coordination site in intracellular metal trafficking: solution structure of the apo and Zn(II) forms of ZntA (46-118)
J.Mol.Biol., 323, 2002
7PXV
DownloadVisualize
BU of 7pxv by Molmil
LsAA9_A chemically reduced with ascorbic acid (high X-ray dose)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, CHLORIDE ION, ...
Authors:Tandrup, T, Muderspach, S.J, Banerjee, S, Ipsen, J, Johansen, K.S, Lo Leggio, L.
Deposit date:2021-10-08
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding.
Iucrj, 9, 2022
7PZ7
DownloadVisualize
BU of 7pz7 by Molmil
Structure of an LPMO at 1.13x10^6 Gy
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACRYLIC ACID, ...
Authors:Tandrup, T, Muderspach, S.J, Ipsen, J.O, Johansen, K.S, Lo Leggio, L.
Deposit date:2021-10-11
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding.
Iucrj, 9, 2022
5X72
DownloadVisualize
BU of 5x72 by Molmil
The crystal Structure PDE delta in complex with (rac)-p9
Descriptor: (2R)-2-(2-fluorophenyl)-3-phenyl-1,2-dihydroquinazolin-4-one, (2S)-2-(2-fluorophenyl)-3-phenyl-1,2-dihydroquinazolin-4-one, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Authors:Jiang, Y, Zhuang, C, Chen, L, Wang, R, Wang, F, Sheng, C.
Deposit date:2017-02-23
Release date:2017-10-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Biology-Inspired Discovery of Novel KRAS-PDE delta Inhibitors
J. Med. Chem., 60, 2017
1N2L
DownloadVisualize
BU of 1n2l by Molmil
Crystal structure of a covalent intermediate of endogenous human arylsulfatase A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ARYLSULFATASE A, ...
Authors:Chruszcz, M, Laidler, P, Monkiewicz, M, Ortlund, E, Lebioda, L, Lewinski, K.
Deposit date:2002-10-23
Release date:2003-12-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of a covalent intermediate of endogenous human arylsulfatase A.
J.Inorg.Biochem., 96, 2003
5BK4
DownloadVisualize
BU of 5bk4 by Molmil
Cryo-EM structure of Mcm2-7 double hexamer on dsDNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (60-mer), strand 1, ...
Authors:Li, H, Yuan, Z, Bai, L.
Deposit date:2017-09-12
Release date:2017-10-25
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of Mcm2-7 double hexamer on DNA suggests a lagging-strand DNA extrusion model.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1XEF
DownloadVisualize
BU of 1xef by Molmil
Crystal structure of the ATP/Mg2+ bound composite dimer of HlyB-NBD
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Alpha-hemolysin translocation ATP-binding protein hlyB, MAGNESIUM ION
Authors:Zaitseva, J, Jenewein, S, Holland, I.B, Schmitt, L.
Deposit date:2004-09-10
Release date:2005-06-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:H662 is the linchpin of ATP hydrolysis in the nucleotide-binding domain of the ABC transporter HlyB
Embo J., 24, 2005
1MU8
DownloadVisualize
BU of 1mu8 by Molmil
thrombin-hirugen_l-378,650
Descriptor: 2-(6-CHLORO-3-{[2,2-DIFLUORO-2-(2-PYRIDINYL)ETHYL]AMINO}-2-OXO-1(2H)-PYRAZINYL)-N-[(2-FLUORO-3-METHYL-6-PYRIDINYL)METHYL]ACETAMIDE, HIRUDIN IIB, THROMBIN
Authors:Burgey, C.S, Robinson, K.A, Lyle, T.A, Sanderson, P.E, Lewis, S.D, Lucas, B.J, Krueger, J.A, Singh, R, Miller-Stein, C, White, R.B, Wong, B, Lyle, E.A, Williams, P.D, Coburn, C.A, Dorsey, B.D, Barrow, J.C, Stranieri, M.T, Holahan, M.A, Sitko, G.R, Cook, J.J, McMasters, D.R, McDonough, C.M, Sanders, W.M, Wallace, A.A, Clayton, F.C, Bohn, D, Leonard, Y.M, Detwiler Jr, T.J, Lynch Jr, J.J, Yan, Y, Chen, Z, Kuo, L, Gardell, S.J, Shafer, J.A, Vacca, J.P.J.
Deposit date:2002-09-23
Release date:2004-04-06
Last modified:2021-07-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Metabolism-directed optimization of 3-aminopyrazinone acetamide thrombin inhibitors. Development of an orally bioavailable series containing P1 and P3 pyridines.
J.Med.Chem., 46, 2003
1MWA
DownloadVisualize
BU of 1mwa by Molmil
2C/H-2KBM3/DEV8 ALLOGENEIC COMPLEX
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2C T CELL RECEPTOR ALPHA CHAIN, ...
Authors:Luz, J.G, Huang, M.D, Garcia, K.C, Rudolph, M.G, Teyton, L, Wilson, I.A.
Deposit date:2002-09-27
Release date:2002-11-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural comparison of allogeneic and syngeneic T cell receptor-peptide-major histocompatibility complex complexes: a buried alloreactive mutation subtly alters peptide presentation substantially increasing V(beta) Interactions.
J.EXP.MED., 195, 2002

224004

数据于2024-08-21公开中

PDB statisticsPDBj update infoContact PDBjnumon