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6JU5
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BU of 6ju5 by Molmil
Aspergillus oryzae pro-tyrosinase C92A/F513Y mutant
Descriptor: COPPER (II) ION, Tyrosinase
Authors:Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-04-13
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JU8
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BU of 6ju8 by Molmil
Aspergillus oryzae active-tyrosinase copper-bound C92A mutant
Descriptor: COPPER (II) ION, NITRATE ION, Tyrosinase
Authors:Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-04-13
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JUB
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BU of 6jub by Molmil
Radiation damage in Aspergillus oryzae pro-tyrosinase oxygen-bound C92A mutant
Descriptor: COPPER (II) ION, PEROXIDE ION, Tyrosinase
Authors:Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-04-13
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
7CEC
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BU of 7cec by Molmil
Structure of alpha6beta1 integrin in complex with laminin-511
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Arimori, T, Miyazaki, N, Takagi, J.
Deposit date:2020-06-22
Release date:2021-06-23
Last modified:2021-07-14
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural mechanism of laminin recognition by integrin.
Nat Commun, 12, 2021
7CEA
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BU of 7cea by Molmil
Crystal structure of HUTS-4 Fv-clasp fragment
Descriptor: HUTS-4 VH(S112C)-SARAH, HUTS-4 VL(C87Y)-SARAH(S37C)
Authors:Arimori, T, Takagi, J.
Deposit date:2020-06-22
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural mechanism of laminin recognition by integrin.
Nat Commun, 12, 2021
7CEB
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BU of 7ceb by Molmil
Crystal structure of alpha6beta1 integrin headpiece
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Integrin alpha-6, ...
Authors:Arimori, T, Takagi, J.
Deposit date:2020-06-22
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural mechanism of laminin recognition by integrin.
Nat Commun, 12, 2021
1P91
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BU of 1p91 by Molmil
Crystal Structure of RlmA(I) enzyme: 23S rRNA n1-G745 methyltransferase (NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ER19)
Descriptor: Ribosomal RNA large subunit methyltransferase A, S-ADENOSYLMETHIONINE, SULFATE ION, ...
Authors:Das, K, Acton, T, Montelione, G, Arnold, E, Northeast Structural Genomics Consortium (NESG)
Deposit date:2003-05-08
Release date:2004-03-30
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of RlmAI: implications for understanding the 23S rRNA G745/G748-methylation at the macrolide antibiotic-binding site.
Proc.Natl.Acad.Sci.Usa, 101, 2004
3UIX
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BU of 3uix by Molmil
Crystal structure of Pim1 kinase in complex with small molecule inhibitor
Descriptor: 2-{4-[(3-aminopropyl)amino]quinazolin-2-yl}phenol, CALCIUM ION, CHLORIDE ION, ...
Authors:Parker, L.J.
Deposit date:2011-11-06
Release date:2012-04-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A novel pim-1 kinase inhibitor targeting residues that bind the substrate Peptide.
J.Mol.Biol., 417, 2012
4CIU
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BU of 4ciu by Molmil
Crystal structure of E. coli ClpB
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHAPERONE PROTEIN CLPB
Authors:Kopp, J, Sinning, I, Bukau, B, Kummer, E, Mogk, A.
Deposit date:2013-12-16
Release date:2014-05-14
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Head-to-Tail Interactions of the Coiled-Coil Domains Regulate Clpb Cooperation with Hsp70 in Protein Disaggregation
Elife, 3, 2014
2BHJ
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BU of 2bhj by Molmil
murine iNO synthase with coumarin inhibitor
Descriptor: 7,8-DIHYDROBIOPTERIN, NITRIC OXIDE SYNTHASE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Mathieu, M, Guilloteau, J.P.
Deposit date:2005-01-12
Release date:2005-03-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Design, Synthesis and Characterization of a Novel Class of Coumarin-Based Inhibitors of Inducible Nitric Oxide Synthase
Bioorg.Med.Chem., 13, 2005
6JU9
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BU of 6ju9 by Molmil
Aspergillus oryzae active-tyrosinase copper-bound C92A mutant complexed with L-tyrosine
Descriptor: 3,4-DIHYDROXYPHENYLALANINE, COPPER (II) ION, NITRATE ION, ...
Authors:Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-04-13
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
5YIZ
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BU of 5yiz by Molmil
Mouse Cereblon thalidomide binding domain complexed with racemic thalidomide
Descriptor: Protein cereblon, S-Thalidomide, SULFATE ION, ...
Authors:Mori, T, Hakoshima, T.
Deposit date:2017-10-06
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of thalidomide enantiomer binding to cereblon
Sci Rep, 8, 2018
5YJ0
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BU of 5yj0 by Molmil
Mouse Cereblon thalidomide binding domain complexed with S-form thalidomide
Descriptor: Protein cereblon, S-Thalidomide, SULFATE ION, ...
Authors:Mori, T, Hakoshima, T.
Deposit date:2017-10-06
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of thalidomide enantiomer binding to cereblon
Sci Rep, 8, 2018
7D83
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BU of 7d83 by Molmil
Crystal structure of HIV-1 integrase catalytic core domain in complex with 2-(tert-butoxy)-2-(2-(3-cyclohexylureido)-3,6-dimethyl-5-(5-methylchroman-6-yl)pyridin-4-yl)acetic acid
Descriptor: (2S)-2-[2-(cyclohexylcarbamoylamino)-3,6-dimethyl-5-(5-methyl-3,4-dihydro-2H-chromen-6-yl)pyridin-4-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid, Integrase, SULFATE ION
Authors:Sugiyama, S, Sekiguchi, Y.
Deposit date:2020-10-07
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Discovery of novel HIV-1 integrase-LEDGF/p75 allosteric inhibitors based on a pyridine scaffold forming an intramolecular hydrogen bond.
Bioorg.Med.Chem.Lett., 33, 2020
6JU7
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BU of 6ju7 by Molmil
Aspergillus oryzae active-tyrosinase copper-depleted C92A mutant complexed with L-tyrosine
Descriptor: NITRATE ION, TYROSINE, Tyrosinase
Authors:Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-04-13
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JUA
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BU of 6jua by Molmil
Aspergillus oryzae pro-tyrosinase oxygen-bound C92A mutant
Descriptor: COPPER (II) ION, PEROXIDE ION, Tyrosinase
Authors:Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-04-13
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JU4
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BU of 6ju4 by Molmil
Aspergillus oryzae pro-tyrosinase F513Y mutant
Descriptor: COPPER (II) ION, Tyrosinase
Authors:Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-04-13
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
3W67
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BU of 3w67 by Molmil
Crystal structure of mouse alpha-tocopherol transfer protein in complex with alpha-tocopherol and phosphatidylinositol-(3,4)-bisphosphate
Descriptor: (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL, (2R)-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dibutanoate, Alpha-tocopherol transfer protein
Authors:Ohto, U, Satow, Y.
Deposit date:2013-02-11
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Impaired alpha-TTP-PIPs interaction underlies familial vitamin E deficiency
Science, 340, 2013
3TZ1
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BU of 3tz1 by Molmil
Crystal structure of the Ca2+-saturated C-terminal domain of Akazara scallop troponin C in complex with a troponin I fragment
Descriptor: CALCIUM ION, Troponin C, Troponin I
Authors:Yumoto, F, Kato, Y.S, Ohtsuki, I, Tanokura, M.
Deposit date:2011-09-26
Release date:2013-01-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the Ca2+-saturated C-terminal domain of scallop troponin C in complex with a troponin I fragment
Biol.Chem., 394, 2012
3W68
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BU of 3w68 by Molmil
Crystal structure of mouse alpha-tocopherol transfer protein in complex with alpha-tocopherol and phosphatidylinositol-(4,5)-bisphosphate
Descriptor: (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL, (2R)-3-{[(R)-HYDROXY{[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIHYDROXY-4,5-BIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1 ,2-DIYL DIBUTANOATE, (2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXY BUTOXY)PROPYL BUTYRATE, ...
Authors:Ohto, U, Satow, Y.
Deposit date:2013-02-11
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Impaired alpha-TTP-PIPs interaction underlies familial vitamin E deficiency
Science, 340, 2013
1QNF
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BU of 1qnf by Molmil
STRUCTURE OF PHOTOLYASE
Descriptor: 8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE, FLAVIN-ADENINE DINUCLEOTIDE, PHOTOLYASE
Authors:Miki, K, Kitadokoro, K.
Deposit date:1997-07-04
Release date:1998-01-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of DNA photolyase from Anacystis nidulans
Nat.Struct.Biol., 4, 1997
7FH2
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BU of 7fh2 by Molmil
Crystal structure of the first bromodomain of BRD4 in complex with 16D10
Descriptor: Bromodomain-containing protein 4, CHLORIDE ION, N-[2-[2-[(E)-3-(2,5-dimethoxyphenyl)prop-2-enoyl]-4,5-dimethoxy-phenyl]ethyl]ethanamide
Authors:Yokoyama, T, Hirasawa, N.
Deposit date:2021-07-29
Release date:2022-08-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.492 Å)
Cite:A chalcone derivative suppresses TSLP induction in mice and human keratinocytes through binding to BET family proteins.
Biochem Pharmacol, 194, 2021
2DOS
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BU of 2dos by Molmil
Structural basis for the recognition of Lys48-linked polyubiquitin chain by the Josephin domain of ataxin-3, a putative deubiquitinating enzyme
Descriptor: Ataxin-3
Authors:Sumiyoshi, A.
Deposit date:2006-05-03
Release date:2007-05-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Mode of substrate recognition by the Josephin domain of ataxin-3, which has an endo-type deubiquitinase activity.
Febs Lett., 588, 2014
3OQJ
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BU of 3oqj by Molmil
Crystal structure of B. licheniformis CDPS yvmC-BLIC in complex with CAPSO
Descriptor: (2S)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid, Putative uncharacterized protein yvmC
Authors:Bonnefond, L, Arai, T, Suzuki, T, Ishitani, R, Nureki, O.
Deposit date:2010-09-03
Release date:2011-02-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Structural basis for nonribosomal peptide synthesis by an aminoacyl-tRNA synthetase paralog.
Proc.Natl.Acad.Sci.USA, 108, 2011
3SMO
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BU of 3smo by Molmil
Crystal structure of human 14-3-3 sigma C38V/N166H in complex with TASK-3 peptide and stabilizer Fusicoccin J aglycone
Descriptor: 14-3-3 protein sigma, Fusicoccin J aglycone, MAGNESIUM ION, ...
Authors:Anders, C, Schumacher, B, Ottmann, C.
Deposit date:2011-06-28
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A semisynthetic fusicoccane stabilizes a protein-protein interaction and enhances the expression of K+ channels at the cell surface.
Chem. Biol., 20, 2013

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