Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2L8R
DownloadVisualize
BU of 2l8r by Molmil
Solution structure of human protein C6orf130 in complex with ADP-ribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Uncharacterized protein C6orf130
Authors:Lytle, B.L, Peterson, F.C, Volkman, B.F, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2011-01-22
Release date:2011-02-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Orphan Macrodomain Protein (Human C6orf130) Is an O-Acyl-ADP-ribose Deacylase: SOLUTION STRUCTURE AND CATALYTIC PROPERTIES.
J.Biol.Chem., 286, 2011
2LQ7
DownloadVisualize
BU of 2lq7 by Molmil
E2 binding surface on Uba3 beta-grasp domain undergoes a conformational transition
Descriptor: NEDD8-activating enzyme E1 catalytic subunit
Authors:Elgin, E.S, Peterson, F.C, Volkman, B.F.
Deposit date:2012-02-27
Release date:2012-07-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:E2-binding surface on Uba3 beta-grasp domain undergoes a conformational transition.
Proteins, 80, 2012
2N54
DownloadVisualize
BU of 2n54 by Molmil
Solution structure of a disulfide stabilized XCL1 dimer
Descriptor: Lymphotactin
Authors:Tyler, R.C, Tuinstra, R.L, Peterson, F.F, Volkman, B.F.
Deposit date:2015-07-07
Release date:2015-10-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Engineering Metamorphic Chemokine Lymphotactin/XCL1 into the GAG-Binding, HIV-Inhibitory Dimer Conformation.
Acs Chem.Biol., 10, 2015
2N55
DownloadVisualize
BU of 2n55 by Molmil
Structure of constitutively monomeric CXCL12 in complex with the CXCR4 N-terminus
Descriptor: C-X-C chemokine receptor type 4, Stromal cell-derived factor 1
Authors:Ziarek, J.J, Peterson, F.C, Volkman, B.F.
Deposit date:2015-07-07
Release date:2016-04-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for chemokine recognition by a G protein-coupled receptor and implications for receptor activation.
Sci Signal, 10, 2017
2QL0
DownloadVisualize
BU of 2ql0 by Molmil
Zinc-substituted Rubredoxin from Desulfovibrio Vulgaris
Descriptor: Rubredoxin, ZINC ION
Authors:Goodfellow, B.J, Nunes, S.G, Volkman, B.F, Moura, J.G, Macedo, A.L, Duarte, I.C, Markley, J.L, Moura, I.
Deposit date:2007-07-12
Release date:2008-07-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:
To be published
1J9O
DownloadVisualize
BU of 1j9o by Molmil
SOLUTION STRUCTURE OF HUMAN LYMPHOTACTIN
Descriptor: LYMPHOTACTIN
Authors:Kuloglu, E.S, McCaslin, D.R, Kitabwalla, M, Pauza, C.D, Markley, J.L, Volkman, B.F.
Deposit date:2001-05-28
Release date:2001-10-24
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Monomeric solution structure of the prototypical 'C' chemokine lymphotactin.
Biochemistry, 40, 2001
1K48
DownloadVisualize
BU of 1k48 by Molmil
REFINED STRUCTURE AND DISULFIDE PAIRING OF THE KALATA B1 PEPTIDE
Descriptor: Kalata B1
Authors:Skjeldal, L, Gran, L, Sletten, K, Volkman, B.F.
Deposit date:2001-10-05
Release date:2002-04-10
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Refined structure and metal binding site of the kalata B1 peptide.
Arch.Biochem.Biophys., 399, 2002
1JJZ
DownloadVisualize
BU of 1jjz by Molmil
REFINED STRUCTURE AND DISULFIDE PAIRING OF THE KALATA B1 PEPTIDE
Descriptor: Kalata-B4
Authors:Skjeldal, L, Gran, L, Sletten, K, Volkman, B.F.
Deposit date:2001-07-10
Release date:2002-06-12
Last modified:2020-08-12
Method:SOLUTION NMR
Cite:Refined structure and metal binding site of the kalata B1 peptide.
Arch.Biochem.Biophys., 399, 2002
1J8I
DownloadVisualize
BU of 1j8i by Molmil
Solution Structure of Human Lymphotactin
Descriptor: Lymphotactin
Authors:Kuloglu, E.S, McCaslin, D.R, Markley, J.L, Pauza, C.D, Volkman, B.F.
Deposit date:2001-05-21
Release date:2001-10-24
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Monomeric solution structure of the prototypical 'C' chemokine lymphotactin.
Biochemistry, 40, 2001
2HDL
DownloadVisualize
BU of 2hdl by Molmil
Solution structure of Brak/CXCL14
Descriptor: Small inducible cytokine B14
Authors:Peterson, F.C, Thorpe, J.A, Harder, A.G, Volkman, B.F, Schwarze, S.R.
Deposit date:2006-06-20
Release date:2006-10-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Determinants Involved in the Regulation of CXCL14/BRAK Expression by the 26 S Proteasome.
J.Mol.Biol., 363, 2006
2KKD
DownloadVisualize
BU of 2kkd by Molmil
NMR Structure of Ni Substitued Desulfovibrio vulgaris Rubredoxin
Descriptor: NICKEL (II) ION, Rubredoxin
Authors:Nunes, S.G, Volkman, B.F, Moura, J.J.G, Moura, I, Macedo, A.L, Markley, J.L, Duarte, I.C.
Deposit date:2009-06-18
Release date:2009-12-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:An NMR structural study of nickel-substituted rubredoxin
J.Biol.Inorg.Chem., 15, 2010
2KVB
DownloadVisualize
BU of 2kvb by Molmil
Solution structure of CI-MPR domain 5 bound to N-acetylglucosaminyl 6-phosphomethylmannoside
Descriptor: Cation-independent mannose-6-phosphate receptor
Authors:Olson, L.J, Peterson, F.C, Volkman, B.F, Dahms, N.M.
Deposit date:2010-03-10
Release date:2010-07-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for recognition of phosphodiester-containing lysosomal enzymes by the cation-independent mannose 6-phosphate receptor.
Proc.Natl.Acad.Sci.USA, 107, 2010
2KY5
DownloadVisualize
BU of 2ky5 by Molmil
Solution structure of the PECAM-1 cytoplasmic tail with DPC
Descriptor: Platelet endothelial cell adhesion molecule
Authors:Lytle, B.L, Peterson, F.C, Volkman, B.F, Paddock, C, Newman, D.K, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2010-05-14
Release date:2010-05-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Residues within a lipid-associated segment of the PECAM-1 cytoplasmic domain are susceptible to inducible, sequential phosphorylation.
Blood, 117, 2011
7LP5
DownloadVisualize
BU of 7lp5 by Molmil
Structure of Nedd4L WW3 domain
Descriptor: Angiomotin,E3 ubiquitin-protein ligase NEDD4-like
Authors:Alam, S.L, Alian, A, Thompson, T, Rheinemann, L, Volkman, B.F, Peterson, F.C, Sundquist, W.I.
Deposit date:2021-02-11
Release date:2021-07-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release.
J.Biol.Chem., 297, 2021
7LP4
DownloadVisualize
BU of 7lp4 by Molmil
Structure of Nedd4L WW3 domain
Descriptor: E3 ubiquitin-protein ligase NEDD4-like
Authors:Alam, S.L, Alian, A, Thompson, T, Rheinemann, L, Volkman, B.F, Peterson, F.C, Sundquist, W.I.
Deposit date:2021-02-11
Release date:2021-07-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release.
J.Biol.Chem., 297, 2021
7MLC
DownloadVisualize
BU of 7mlc by Molmil
PYL10 bound to the ABA pan-antagonist 4a
Descriptor: 1-{2-[3,5-dicyclopropyl-4-(4-{[(quinoxaline-2-carbonyl)amino]methyl}-1H-1,2,3-triazol-1-yl)phenyl]acetamido}cyclohexane-1-carboxylic acid, Abscisic acid receptor PYL10, GLYCEROL
Authors:Peterson, F.C, Vaidya, A.S, Volkman, B.F, Cutler, S.R.
Deposit date:2021-04-28
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Click-to-lead design of a picomolar ABA receptor antagonist with potent activity in vivo.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MLD
DownloadVisualize
BU of 7mld by Molmil
PYL10 bound to the ABA pan-antagonist antabactin
Descriptor: Abscisic acid receptor PYL10, CITRIC ACID, antabactin
Authors:Peterson, F.C, Vaidya, A.S, Volkman, B.F, Cutler, S.R.
Deposit date:2021-04-28
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Click-to-lead design of a picomolar ABA receptor antagonist with potent activity in vivo.
Proc.Natl.Acad.Sci.USA, 118, 2021
2KQR
DownloadVisualize
BU of 2kqr by Molmil
Solution structure of the N-terminal domain (residues 1-111) of Brugia malayi asparaginyl-tRNA synthetase
Descriptor: Asparaginyl-tRNA synthetase, cytoplasmic
Authors:Volkman, B.F, Peterson, F.C, Kron, M.A, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-11-16
Release date:2009-12-15
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:A Hybrid Structural Model of the Complete Brugia malayi Cytoplasmic Asparaginyl-tRNA Synthetase.
J.Mol.Biol., 405, 2011
7MWN
DownloadVisualize
BU of 7mwn by Molmil
An engineered PYL2-based WIN 55,212-2 synthetic cannabinoid sensor with a stabilized HAB1 variant
Descriptor: ACETATE ION, Abscisic acid receptor PYL2, CHLORIDE ION, ...
Authors:Peterson, F.C, Beltran, J, Bedewitz, M, Steiner, P.J, Cutler, S.R, Whitehead, T.A.
Deposit date:2021-05-17
Release date:2022-06-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Rapid biosensor development using plant hormone receptors as reprogrammable scaffolds.
Nat.Biotechnol., 40, 2022
4UAI
DownloadVisualize
BU of 4uai by Molmil
Crystal structure of CXCL12 in complex with inhibitor
Descriptor: 1-phenyl-3-[4-(1H-tetrazol-5-yl)phenyl]urea, SULFATE ION, Stromal cell-derived factor 1
Authors:Smith, E.W, Chen, Y.
Deposit date:2014-08-09
Release date:2014-11-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Analysis of a Novel Small Molecule Ligand Bound to the CXCL12 Chemokine.
J.Med.Chem., 57, 2014
1VJI
DownloadVisualize
BU of 1vji by Molmil
Gene Product of At1g76680 from Arabidopsis thaliana
Descriptor: 12-oxophytodienoate reductase (OPR1), FLAVIN MONONUCLEOTIDE
Authors:Wesenberg, G.E, Smith, D.W, Phillips Jr, G.N, Johnson, K.A, Bingman, C.A, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2004-02-24
Release date:2004-03-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:X-ray structure of Arabidopsis At1g77680, 12-oxophytodienoate reductase isoform 1.
Proteins, 61, 2005
5EKI
DownloadVisualize
BU of 5eki by Molmil
Crystal Structure of Truncated CCL21
Descriptor: C-C motif chemokine 21, SULFATE ION
Authors:Lewandowski, E.M, Smith, E.W, Chen, Y.
Deposit date:2015-11-03
Release date:2016-10-05
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic Structure of Truncated CCL21 and the Putative Sulfotyrosine-Binding Site.
Biochemistry, 55, 2016
1RZX
DownloadVisualize
BU of 1rzx by Molmil
Crystal Structure of a Par-6 PDZ-peptide Complex
Descriptor: Acetylated VKESLV Peptide, CG5884-PA
Authors:Peterson, F.C, Penkert, R.R, Volkman, F.B, Prehoda, K.E.
Deposit date:2003-12-29
Release date:2004-01-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Cdc42 regulates the Par-6 PDZ domain through an allosteric CRIB-PDZ transition.
Mol.Cell, 13, 2004
3U7A
DownloadVisualize
BU of 3u7a by Molmil
AL-09 Y32F Y96F
Descriptor: Amyloidogenic immunoglobulin light chain protein AL-09 Y32F Y96F, variable domain
Authors:DiCostanzo, A.C, Thompson, J.R, Ramirez-Alvarado, M.
Deposit date:2011-10-13
Release date:2012-07-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Tyrosine Residues mediate crucial interactions in amyloid formation for immunoglobulin light chains
To be Published
4LZL
DownloadVisualize
BU of 4lzl by Molmil
Structure of the inactive form of the regulatory domain from the repressor of iron transport regulator (RitR)
Descriptor: GLYCEROL, Response regulator
Authors:Silvaggi, N.R, Han, L, Ulijasz, A.T.
Deposit date:2013-07-31
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Defining the Aspartate-Less Receiver (ALR) Domains: Structure and Activation of RitR from Streptococcus pneumoniae
To be Published

224004

数据于2024-08-21公开中

PDB statisticsPDBj update infoContact PDBjnumon