Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5WZY
DownloadVisualize
BU of 5wzy by Molmil
Crystal structure of the P2X4 receptor from zebrafish in the presence of CTP at 2.8 Angstroms
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYTIDINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Kasuya, G, Hattori, M, Nureki, O.
Deposit date:2017-01-19
Release date:2017-04-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.799 Å)
Cite:Structural insights into the nucleotide base specificity of P2X receptors
Sci Rep, 7, 2017
6JN0
DownloadVisualize
BU of 6jn0 by Molmil
Structure of H247A mutant peptidoglycan peptidase complex with tetra-tri peptide
Descriptor: C0O-DAL-API, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.164 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JN7
DownloadVisualize
BU of 6jn7 by Molmil
Structure of H216A mutant closed form peptidoglycan peptidase
Descriptor: D(-)-TARTARIC ACID, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JMY
DownloadVisualize
BU of 6jmy by Molmil
Structure of wild type closed form of peptidoglycan peptidase
Descriptor: CITRIC ACID, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.661 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6KGY
DownloadVisualize
BU of 6kgy by Molmil
HOCl-induced flavoprotein disulfide reductase RclA from Escherichia coli
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Pyridine nucleotide-disulphide oxidoreductase dimerisation region
Authors:Baek, Y, Ha, N.-C.
Deposit date:2019-07-12
Release date:2020-02-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and function of the hypochlorous acid-induced flavoprotein RclA fromEscherichia coli.
J.Biol.Chem., 295, 2020
6KOD
DownloadVisualize
BU of 6kod by Molmil
Cu(II) complex of HOCl-induced flavoprotein disulfide reductase RclA C43S mutant from Escherichia coli
Descriptor: CHLORIDE ION, COPPER (II) ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Baek, Y, Ha, N.-C.
Deposit date:2019-08-09
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and function of the hypochlorous acid-induced flavoprotein RclA fromEscherichia coli.
J.Biol.Chem., 295, 2020
6KV1
DownloadVisualize
BU of 6kv1 by Molmil
Structure of wild type closed form of peptidoglycan peptidase ZN SAD
Descriptor: CITRIC ACID, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-09-03
Release date:2020-01-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.722 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6KYY
DownloadVisualize
BU of 6kyy by Molmil
Cu(II) complex of HOCl-induced flavoprotein disulfide reductase RclA from Escherichia coli
Descriptor: CHLORIDE ION, COPPER (II) ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Baek, Y, Ha, N.-C.
Deposit date:2019-09-20
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and function of the hypochlorous acid-induced flavoprotein RclA fromEscherichia coli.
J.Biol.Chem., 295, 2020
5Z2W
DownloadVisualize
BU of 5z2w by Molmil
Crystal structure of the bacterial cell division protein FtsQ and FtsB
Descriptor: Cell division protein FtsB, Cell division protein FtsQ, MAGNESIUM ION
Authors:Choi, Y, Yoon, H.J, Lee, H.H.
Deposit date:2018-01-04
Release date:2019-01-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Insights into the FtsQ/FtsB/FtsL Complex, a Key Component of the Divisome.
Sci Rep, 8, 2018
7ERQ
DownloadVisualize
BU of 7erq by Molmil
The regulatory domain of YeiE, a sulfite sensing LysR-type transcriptional regulator from Cronobacter sakazakii (ligand-free form)
Descriptor: LysR family transcriptional regulator
Authors:Hong, S, Ha, N.-C.
Deposit date:2021-05-06
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of YeiE from Cronobacter sakazakii and the role of sulfite tolerance in gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
7ERP
DownloadVisualize
BU of 7erp by Molmil
The regulatory domain of YeiE, a sulfite sensing LysR-type transcriptional regulator from Cronobacter sakazakii (sulfite-bound form)
Descriptor: LysR family transcriptional regulator, SULFITE ION
Authors:Hong, S, Ha, N.-C.
Deposit date:2021-05-06
Release date:2022-03-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structures of YeiE from Cronobacter sakazakii and the role of sulfite tolerance in gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
7FDF
DownloadVisualize
BU of 7fdf by Molmil
The E145S mutant of the regulatory domain of YeiE, a sulfite sensing LysR-type transcriptional regulator from Cronobacter sakazakii (sulfate-bound form)
Descriptor: LysR family transcriptional regulator, SULFATE ION
Authors:Hong, S, Ha, N.-C.
Deposit date:2021-07-16
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of YeiE from Cronobacter sakazakii and the role of sulfite tolerance in gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
7E69
DownloadVisualize
BU of 7e69 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-3
Descriptor: N-oxidanyl-4-[(4-sulfamoylphenyl)methyl]benzamide, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E65
DownloadVisualize
BU of 7e65 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3
Descriptor: (2S)-2-acetamido-N-[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]-3-(4-sulfamoylphenyl)propanamide, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E60
DownloadVisualize
BU of 7e60 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 1
Descriptor: (2~{R},6~{S})-2,6-diacetamido-7-[[(2~{R})-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-7-oxidanylidene-heptanoic acid, Peptidase M23, ZINC ION
Authors:Min, K, Yoon, H.J, Choi, Y, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E64
DownloadVisualize
BU of 7e64 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-2
Descriptor: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]amino]ethanoic acid, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E67
DownloadVisualize
BU of 7e67 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-2
Descriptor: N-oxidanyl-2-[4-(4-sulfamoylphenyl)phenyl]ethanamide, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E61
DownloadVisualize
BU of 7e61 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2
Descriptor: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]-(phenylmethyl)amino]ethanoic acid, Peptidase M23, ZINC ION
Authors:Min, K.J, Yoon, H.J, Choi, Y, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E63
DownloadVisualize
BU of 7e63 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-1
Descriptor: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]-(cyclopentylmethyl)amino]ethanoic acid, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E66
DownloadVisualize
BU of 7e66 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-1
Descriptor: N-[2-(oxidanylamino)-2-oxidanylidene-ethyl]-2-(4-sulfamoylphenyl)ethanamide, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7DNP
DownloadVisualize
BU of 7dnp by Molmil
Structure of Brucella abortus SagA
Descriptor: (2R)-2-[[(2S)-2-[[(2R)-2-[(2R,3S,4R,5R,6S)-5-acetamido-3-[(2S,3R,4R,5S,6R)-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-2-(hydroxymethyl)-6-oxidanyl-oxan-4-yl]oxypropanoyl]amino]propanoyl]amino]pentanedioic acid, Secretion activator protein, hypothetical
Authors:Hyun, Y, Ha, N.-C.
Deposit date:2020-12-10
Release date:2021-06-23
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and Function of the Autolysin SagA in the Type IV Secretion System of Brucella abortus .
Mol.Cells, 44, 2021
7DPY
DownloadVisualize
BU of 7dpy by Molmil
Structure of Brucella abortus PhiA
Descriptor: Brucella Abortus PhiA
Authors:Hyun, Y, Ha, N.-C.
Deposit date:2020-12-22
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and Function of the Autolysin SagA in the Type IV Secretion System of Brucella abortus .
Mol.Cells, 44, 2021
4W2R
DownloadVisualize
BU of 4w2r by Molmil
Structure of Hs/AcPRC2 in complex with 5,8-dichloro-2-[(4-methoxy-6-methyl-2-oxo-1,2-dihydropyridin-3-yl)methyl]-7-[(R)-methoxy(oxetan-3-yl)methyl]-3,4-dihydroisoquinolin-1(2H)-one
Descriptor: 5,8-dichloro-2-[(4-methoxy-6-methyl-2-oxo-1,2-dihydropyridin-3-yl)methyl]-7-[(R)-methoxy(oxetan-3-yl)methyl]-3,4-dihydroisoquinolin-1(2H)-one, Enhancer of zeste 2 polycomb repressive complex 2 subunit, Polycomb protein EED, ...
Authors:Gajiwala, K.S, Brooun, A, Liu, W, Deng, Y, Stewart, A.E.
Deposit date:2017-09-25
Release date:2017-12-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Optimization of Orally Bioavailable Enhancer of Zeste Homolog 2 (EZH2) Inhibitors Using Ligand and Property-Based Design Strategies: Identification of Development Candidate (R)-5,8-Dichloro-7-(methoxy(oxetan-3-yl)methyl)-2-((4-methoxy-6-methyl-2-oxo-1,2-dihydropyridin-3-yl)methyl)-3,4-dihydroisoquinolin-1(2H)-one (PF-06821497).
J. Med. Chem., 61, 2018
8DD5
DownloadVisualize
BU of 8dd5 by Molmil
Crystal structure of KAT6A in complex with inhibitor CTx-648 (PF-9363)
Descriptor: 2,6-dimethoxy-N-{4-methoxy-6-[(1H-pyrazol-1-yl)methyl]-1,2-benzoxazol-3-yl}benzene-1-sulfonamide, Histone acetyltransferase KAT6A, ZINC ION
Authors:Greasley, S.E, Johnson, E, Brodsky, O.
Deposit date:2022-06-17
Release date:2023-07-05
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Targeting KAT6A/KAT6B dependencies in breast cancer with a novel selective, orally bioavailable KAT6 inhibitor, CTx-648/PF-9363
To Be Published
6B3W
DownloadVisualize
BU of 6b3w by Molmil
Structure of Hs/AcPRC2 in complex with 5,8-dichloro-7-(3,5-dimethyl-1,2-oxazol-4-yl)-2-[(4,6-dimethyl-2-oxo-1,2-dihydropyridin-3-yl)methyl]-3,4-dihydroisoquinolin-1(2H)-one
Descriptor: 5,8-dichloro-7-(3,5-dimethyl-1,2-oxazol-4-yl)-2-[(4,6-dimethyl-2-oxo-1,2-dihydropyridin-3-yl)methyl]-3,4-dihydroisoquinolin-1(2H)-one, Enhancer of zeste 2 polycomb repressive complex 2 subunit,Enhancer of zeste 2 polycomb repressive complex 2 subunit, Polycomb protein EED, ...
Authors:Gajiwala, K.S, Brooun, A, Liu, W, Deng, Y, Stewart, A.E.
Deposit date:2017-09-25
Release date:2017-12-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Optimization of Orally Bioavailable Enhancer of Zeste Homolog 2 (EZH2) Inhibitors Using Ligand and Property-Based Design Strategies: Identification of Development Candidate (R)-5,8-Dichloro-7-(methoxy(oxetan-3-yl)methyl)-2-((4-methoxy-6-methyl-2-oxo-1,2-dihydropyridin-3-yl)methyl)-3,4-dihydroisoquinolin-1(2H)-one (PF-06821497).
J. Med. Chem., 61, 2018
<1234

 

224931

数据于2024-09-11公开中

PDB statisticsPDBj update infoContact PDBjnumon